BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005007
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co...   117   1e-24
emb|CBI25619.3| unnamed protein product [Vitis vinifera]              112   2e-23
emb|CBI25617.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrat...   111   5e-23
gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii] gi|25...   111   5e-23

>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
           gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
           putative [Ricinus communis]
          Length = 67

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -2

Query: 306 SKPSAPRTAPQAFTMPSHKSFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRR 127
           ++P AP  A Q   MPSHK+F+IKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRR
Sbjct: 3   TEPLAPLEALQVAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRR 62

Query: 126 TKLGF 112
           TKLGF
Sbjct: 63  TKLGF 67


>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -2

Query: 288 RTAPQAFTMPSHKSFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
           R A +   MPSHK+FMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 14  RRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 72


>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -2

Query: 288 RTAPQAFTMPSHKSFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
           R A +   MPSHK+FMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 12  RRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 70


>ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrata subsp. lyrata]
           gi|297821901|ref|XP_002878833.1| 60S ribosomal protein
           L39 [Arabidopsis lyrata subsp. lyrata]
           gi|297315136|gb|EFH45559.1| 60S ribosomal protein L39
           [Arabidopsis lyrata subsp. lyrata]
           gi|297324672|gb|EFH55092.1| 60S ribosomal protein L39
           [Arabidopsis lyrata subsp. lyrata]
          Length = 51

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -2

Query: 264 MPSHKSFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
           MPSHKSFMIKKKLAKKMRQNRPIPHWIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51


>gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii]
           gi|257219568|gb|ACV50437.1| 60S ribosomal protein L39
           [Jatropha curcas]
          Length = 51

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -2

Query: 264 MPSHKSFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
           MPSHK+FMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51