BLASTX nr result
ID: Coptis21_contig00004990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004990 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324982.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002333571.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002514326.1| conserved hypothetical protein [Ricinus comm... 72 4e-11 ref|XP_002324980.1| predicted protein [Populus trichocarpa] gi|2... 72 5e-11 ref|XP_002281155.2| PREDICTED: uncharacterized protein LOC100266... 70 1e-10 >ref|XP_002324982.1| predicted protein [Populus trichocarpa] gi|222866416|gb|EEF03547.1| predicted protein [Populus trichocarpa] Length = 338 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/58 (63%), Positives = 45/58 (77%) Frame = -3 Query: 302 GSGGVGHVETDTFLQVVVGFGIVSKFDPEFLRKLVMENPSRRDLPKLASALGLGDKMG 129 G G VG E FLQ+V+GFG+ S+FD EFLRKLV EN SRRD+ KLA+A+G G+KMG Sbjct: 241 GGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKMG 298 >ref|XP_002333571.1| predicted protein [Populus trichocarpa] gi|222837220|gb|EEE75599.1| predicted protein [Populus trichocarpa] Length = 498 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/58 (63%), Positives = 45/58 (77%) Frame = -3 Query: 302 GSGGVGHVETDTFLQVVVGFGIVSKFDPEFLRKLVMENPSRRDLPKLASALGLGDKMG 129 G G VG E FLQ+V+GFG+ S+FD EFLRKLV EN SRRD+ KLA+A+G G+KMG Sbjct: 241 GGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKMG 298 >ref|XP_002514326.1| conserved hypothetical protein [Ricinus communis] gi|223546782|gb|EEF48280.1| conserved hypothetical protein [Ricinus communis] Length = 547 Score = 72.4 bits (176), Expect = 4e-11 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Frame = -3 Query: 305 EGSGG----VGHVETDTFLQVVVGFGIVSKFDPEFLRKLVMENPSRRDLPKLASALGLGD 138 EG GG VG E FLQ+VV FG+ ++FD E+LRKLVMEN +RRD+ KLA A+G G+ Sbjct: 233 EGGGGSSGVVGPAEAVMFLQMVVVFGLKARFDEEYLRKLVMENATRRDMAKLAVAVGFGE 292 Query: 137 KMGGM 123 KM GM Sbjct: 293 KMEGM 297 >ref|XP_002324980.1| predicted protein [Populus trichocarpa] gi|222866414|gb|EEF03545.1| predicted protein [Populus trichocarpa] Length = 49 Score = 72.0 bits (175), Expect = 5e-11 Identities = 33/48 (68%), Positives = 42/48 (87%) Frame = -3 Query: 266 FLQVVVGFGIVSKFDPEFLRKLVMENPSRRDLPKLASALGLGDKMGGM 123 FLQ+V+GFG+ S+FD EFLRKLV E+ SRRD+ KLA+A+G G+KMGGM Sbjct: 2 FLQMVLGFGLKSRFDEEFLRKLVAESASRRDMAKLAAAIGFGEKMGGM 49 >ref|XP_002281155.2| PREDICTED: uncharacterized protein LOC100266187 [Vitis vinifera] Length = 533 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 4/62 (6%) Frame = -3 Query: 302 GSGG----VGHVETDTFLQVVVGFGIVSKFDPEFLRKLVMENPSRRDLPKLASALGLGDK 135 G GG +G E F+Q+V GFG+ KFD EFLRK V+E SRRD+PKLA ALG G+K Sbjct: 222 GDGGEGSMIGPTEAAMFMQMVAGFGLKPKFDEEFLRKQVLEFASRRDMPKLAIALGFGEK 281 Query: 134 MG 129 MG Sbjct: 282 MG 283