BLASTX nr result

ID: Coptis21_contig00004867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004867
         (1932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase, chlo...   880   0.0  
ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloropl...   857   0.0  
ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|2...   857   0.0  
ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|2...   856   0.0  
ref|XP_003550908.1| PREDICTED: asparaginyl-tRNA synthetase, chlo...   837   0.0  

>ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase,
            chloroplastic/mitochondrial-like isoform 2 [Vitis
            vinifera] gi|297744376|emb|CBI37350.3| unnamed protein
            product [Vitis vinifera]
          Length = 584

 Score =  880 bits (2273), Expect = 0.0
 Identities = 423/486 (87%), Positives = 460/486 (94%)
 Frame = -1

Query: 1770 GEKVREFRKRLRIVDVKGGPDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 1591
            GEKV EFRKRLR+VD+KGGPDEGLD LG+ L VKGWVRTLRVQSSV F+EVNDGSCLSNM
Sbjct: 99   GEKVGEFRKRLRVVDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNM 158

Query: 1590 QCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSSFPI 1411
            QCV+NSDADGYDQVESG I+TGASV ++G +V SQGSKQKVEL V K++TVG+SD SFPI
Sbjct: 159  QCVMNSDADGYDQVESGSITTGASVSIQGTLVASQGSKQKVELKVLKIVTVGKSDPSFPI 218

Query: 1410 QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE 1231
            QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVW+SSPIITASDCE
Sbjct: 219  QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCE 278

Query: 1230 GAGEQFCVTTLIPTSGESMDSPICSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAETYAF 1051
            GAGEQFCVTTLIP+S E+ DS + +IP  + GLIDWSQDFFGKPAFLTVSGQLNAETYA 
Sbjct: 279  GAGEQFCVTTLIPSSREATDSTVDAIPKAKDGLIDWSQDFFGKPAFLTVSGQLNAETYAT 338

Query: 1050 AFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVLDNC 871
            A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQY+V Y+L+NC
Sbjct: 339  ALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENC 398

Query: 870  KEDMDFFNTWIEKGIIDRLSDVAEKNFVQLTYTDAIELLLRANKKFEFPVKWGCDLQSEH 691
            KEDM+FFNTWIEKGII+RLSDVAEKNFVQLTYTDA+ELLLRANKKFEFPVKWGCDLQSEH
Sbjct: 399  KEDMEFFNTWIEKGIINRLSDVAEKNFVQLTYTDAVELLLRANKKFEFPVKWGCDLQSEH 458

Query: 690  ERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQREERL 511
            ERYITEVA+ GCPVIIRDYPK+IKAFYMR+N+DG+TVAAMD+LVPRVGEL+GGSQREERL
Sbjct: 459  ERYITEVAFGGCPVIIRDYPKDIKAFYMRRNDDGKTVAAMDMLVPRVGELIGGSQREERL 518

Query: 510  DYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPRT 331
            +YL+ RLD+LKL+K+SYWWY DLRR+GSVPHAGFGLGFERLVQFATGIDNIRD IPFPRT
Sbjct: 519  EYLEERLDDLKLSKDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRT 578

Query: 330  PGSAEF 313
            PGSAEF
Sbjct: 579  PGSAEF 584


>ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like
            [Cucumis sativus] gi|449504980|ref|XP_004162346.1|
            PREDICTED: asparagine--tRNA ligase,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 562

 Score =  857 bits (2215), Expect = 0.0
 Identities = 411/489 (84%), Positives = 455/489 (93%)
 Frame = -1

Query: 1779 VKQGEKVREFRKRLRIVDVKGGPDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCL 1600
            V +GEKV EFRK+LRI ++KGG DEG+D LG+  VV GWVRTLRVQSSVTF+EVNDGSC+
Sbjct: 74   VTRGEKVGEFRKKLRISEIKGGRDEGVDRLGQTFVVMGWVRTLRVQSSVTFMEVNDGSCI 133

Query: 1599 SNMQCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSS 1420
            SNMQCVI+S  +GYDQVESG I+TGASVWVEGVVV SQGSKQKVEL + KVI VG+SD S
Sbjct: 134  SNMQCVIDSTTEGYDQVESGLITTGASVWVEGVVVASQGSKQKVELKLQKVIVVGKSDPS 193

Query: 1419 FPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS 1240
            FP+QKK+VSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS
Sbjct: 194  FPVQKKKVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS 253

Query: 1239 DCEGAGEQFCVTTLIPTSGESMDSPICSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAET 1060
            DCEGAGEQFCVTTLIP+SGE   S + SIP T+ G IDWSQDFFGKPAFLTVSGQLNAET
Sbjct: 254  DCEGAGEQFCVTTLIPSSGEPARSDVGSIPKTKEGFIDWSQDFFGKPAFLTVSGQLNAET 313

Query: 1059 YAFAFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVL 880
            YA A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADL+DDM+CATAYLQY+V+++L
Sbjct: 314  YATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMSCATAYLQYVVRHIL 373

Query: 879  DNCKEDMDFFNTWIEKGIIDRLSDVAEKNFVQLTYTDAIELLLRANKKFEFPVKWGCDLQ 700
            +NCKED+DFFNTWIEKGIIDRL+++ E +FVQL YTDAIELLLRANKKFE+PVKWG DLQ
Sbjct: 374  ENCKEDLDFFNTWIEKGIIDRLTNLVENDFVQLPYTDAIELLLRANKKFEYPVKWGSDLQ 433

Query: 699  SEHERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQRE 520
            SEHERYITEVA+ GCPVIIRDYP++IKAFYMRQN+DG+TVAAMD+LVP++GEL+GGSQRE
Sbjct: 434  SEHERYITEVAFGGCPVIIRDYPRDIKAFYMRQNDDGKTVAAMDMLVPKIGELIGGSQRE 493

Query: 519  ERLDYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPF 340
            ERLDYL+ARLD+LKLNKESYWWY DLRR+GSVPHAGFGLGFERLVQF TGIDNIRD IPF
Sbjct: 494  ERLDYLEARLDDLKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIRDAIPF 553

Query: 339  PRTPGSAEF 313
            PR+PGSAEF
Sbjct: 554  PRSPGSAEF 562


>ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|222837389|gb|EEE75768.1|
            predicted protein [Populus trichocarpa]
          Length = 574

 Score =  857 bits (2215), Expect = 0.0
 Identities = 406/486 (83%), Positives = 454/486 (93%)
 Frame = -1

Query: 1770 GEKVREFRKRLRIVDVKGGPDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 1591
            G +V EFR++L+I D+KGGPDEGLD +GK ++V GWVRTLRVQSSVTF+EVNDGSCLSN+
Sbjct: 89   GNRVGEFRRKLKIADIKGGPDEGLDRVGKTIIVMGWVRTLRVQSSVTFIEVNDGSCLSNL 148

Query: 1590 QCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSSFPI 1411
            QCV++ +A+GYDQVESG ++TGAS+W++G VV SQGSKQKVEL V K++ VG+SD S+PI
Sbjct: 149  QCVMDLEAEGYDQVESGLVTTGASIWMQGTVVKSQGSKQKVELKVIKIVAVGKSDPSYPI 208

Query: 1410 QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE 1231
            QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE
Sbjct: 209  QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE 268

Query: 1230 GAGEQFCVTTLIPTSGESMDSPICSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAETYAF 1051
            GAGEQFCVTTLIP S E+ +SP+  IP T+ GLIDWSQDFFGKPAFLTVSGQLNAETYA 
Sbjct: 269  GAGEQFCVTTLIPGSQEAANSPVDGIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYAT 328

Query: 1050 AFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVLDNC 871
            A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQY+V+++L+NC
Sbjct: 329  ALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVRHILENC 388

Query: 870  KEDMDFFNTWIEKGIIDRLSDVAEKNFVQLTYTDAIELLLRANKKFEFPVKWGCDLQSEH 691
            KEDM+FFNTWIEKGIIDRLSDV EK+FVQLTYTDAIELLL+A KKFEFP++WGCDLQSEH
Sbjct: 389  KEDMEFFNTWIEKGIIDRLSDVVEKDFVQLTYTDAIELLLKAKKKFEFPLEWGCDLQSEH 448

Query: 690  ERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQREERL 511
            ERYITE  + GCPVIIRDYPK+IKAFYMRQN+DG+TVAAMD+LVPRVGEL+GGSQREERL
Sbjct: 449  ERYITEEVFGGCPVIIRDYPKDIKAFYMRQNDDGKTVAAMDMLVPRVGELIGGSQREERL 508

Query: 510  DYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPRT 331
            +Y++ RLDELKLNKES+WWY DLRR+GSVPHAGFGLGFERLVQFATGIDNIRD IPFPR 
Sbjct: 509  EYIEDRLDELKLNKESFWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRV 568

Query: 330  PGSAEF 313
            PGSAEF
Sbjct: 569  PGSAEF 574


>ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|222852701|gb|EEE90248.1|
            predicted protein [Populus trichocarpa]
          Length = 578

 Score =  856 bits (2211), Expect = 0.0
 Identities = 410/486 (84%), Positives = 452/486 (93%)
 Frame = -1

Query: 1770 GEKVREFRKRLRIVDVKGGPDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNM 1591
            G +V EFRK+L+I D+KGGPDEGLD +GK +VV GWVRTLRVQSSVTF+EVNDGSCLSNM
Sbjct: 93   GNRVGEFRKKLKIADIKGGPDEGLDRVGKTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNM 152

Query: 1590 QCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSSFPI 1411
            QCV+  +A+GYDQVESG I+TGAS+ V+G VV SQGSKQKVEL V K++ VG+SD S+PI
Sbjct: 153  QCVMGLEAEGYDQVESGLITTGASILVQGTVVESQGSKQKVELKVNKIVLVGKSDPSYPI 212

Query: 1410 QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE 1231
            QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE
Sbjct: 213  QKKRVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCE 272

Query: 1230 GAGEQFCVTTLIPTSGESMDSPICSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAETYAF 1051
            GAGEQFCVTTLIP S E  +SP+  IP T+ GLIDWSQDFFGKPAFLTVSGQLNAETYA 
Sbjct: 273  GAGEQFCVTTLIPGSQEVANSPVDRIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYAT 332

Query: 1050 AFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVLDNC 871
            A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADL DDMACATAYLQY+VK++L+NC
Sbjct: 333  ALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLTDDMACATAYLQYVVKHILENC 392

Query: 870  KEDMDFFNTWIEKGIIDRLSDVAEKNFVQLTYTDAIELLLRANKKFEFPVKWGCDLQSEH 691
            KEDM+FFNTWIEKGIIDRL+DVAEK+FVQLTYTDA+ELLL+A KKFEFPV+WGCDLQSEH
Sbjct: 393  KEDMEFFNTWIEKGIIDRLTDVAEKDFVQLTYTDAVELLLKAKKKFEFPVEWGCDLQSEH 452

Query: 690  ERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQREERL 511
            ERYITE A+ GCPVIIRDYPK+IKAFYMRQN+DG+TVAAMD+LVPRVGEL+GGSQREERL
Sbjct: 453  ERYITEEAFGGCPVIIRDYPKDIKAFYMRQNDDGKTVAAMDMLVPRVGELIGGSQREERL 512

Query: 510  DYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPRT 331
            +YL+ RLDELKLNKES+WWY DLRR+GSVPHAGFGLGFERLVQFATG++NIRD IPFPR 
Sbjct: 513  EYLEDRLDELKLNKESFWWYLDLRRYGSVPHAGFGLGFERLVQFATGLENIRDAIPFPRV 572

Query: 330  PGSAEF 313
            PGSAEF
Sbjct: 573  PGSAEF 578


>ref|XP_003550908.1| PREDICTED: asparaginyl-tRNA synthetase,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 550

 Score =  837 bits (2162), Expect = 0.0
 Identities = 410/540 (75%), Positives = 471/540 (87%), Gaps = 5/540 (0%)
 Frame = -1

Query: 1917 IATDHTTFTPYHHPTSQ----FSLYSIVTISTAND-KKRYISCSAGGKTVDVKQGEKVRE 1753
            IA  H    PY   T+      SL+  + +  ++    R   C+A  +T D     +V++
Sbjct: 17   IAVRHLRTKPYAAATTTALALLSLHKPLFLPHSSPFSSRRAFCAATLRTSD----NRVQQ 72

Query: 1752 FRKRLRIVDVKGGPDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNMQCVINS 1573
            FR++LR+ ++K G  +G D LG+ LVV+GWVRTLR+QSSVTFLE+NDGSCLSNMQCV+NS
Sbjct: 73   FRRKLRVSEIKEG--DGADVLGRNLVVQGWVRTLRIQSSVTFLEINDGSCLSNMQCVLNS 130

Query: 1572 DADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSSFPIQKKRVS 1393
            +A+GYDQVESG ++TGASVWV+GVVV SQGSKQKVEL V K++ +G+SD SFPIQKKR S
Sbjct: 131  EAEGYDQVESGLVTTGASVWVQGVVVKSQGSKQKVELKVNKIVLIGKSDPSFPIQKKRAS 190

Query: 1392 REFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQF 1213
            REFLRTKAHLR RTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQF
Sbjct: 191  REFLRTKAHLRARTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQF 250

Query: 1212 CVTTLIPTSGESMDSPICSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAETYAFAFSDVY 1033
            CVTTLIP+S E+ DSP+ +IP T  GLIDWSQDFFGKPAFLTVSGQLN ETYA A SDVY
Sbjct: 251  CVTTLIPSSHETNDSPVDAIPKTNDGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVY 310

Query: 1032 TFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVLDNCKEDMDF 853
            TFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQ+++++VLDNCKEDM+F
Sbjct: 311  TFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQFVIRHVLDNCKEDMEF 370

Query: 852  FNTWIEKGIIDRLSDVAEKNFVQLTYTDAIELLLRANKKFEFPVKWGCDLQSEHERYITE 673
            F+ WI KGIIDRLSDVA+K+ VQ+TYT+AI+LL  ANKKFEFPVKWG DLQSEHERYITE
Sbjct: 371  FDAWINKGIIDRLSDVADKDVVQITYTEAIDLLSGANKKFEFPVKWGSDLQSEHERYITE 430

Query: 672  VAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQREERLDYLDAR 493
              ++GCPVIIRDYPK+IKAFYMRQN+DGRTVAAMD+LVP +GEL+GGSQREERL+YL+AR
Sbjct: 431  EVFSGCPVIIRDYPKDIKAFYMRQNDDGRTVAAMDMLVPGIGELIGGSQREERLEYLEAR 490

Query: 492  LDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPRTPGSAEF 313
            LD+LKLNK++YWWY DLRR+GSVPHAGFGLGFERLVQFATG+DNIRDVIPFPRTPGSAEF
Sbjct: 491  LDDLKLNKDAYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDVIPFPRTPGSAEF 550


Top