BLASTX nr result

ID: Coptis21_contig00004828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004828
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545095.1| PREDICTED: RPM1-interacting protein 4-like [...   128   2e-27
gb|AFK47855.1| unknown [Medicago truncatula]                          125   2e-26
ref|XP_002532206.1| NOI, putative [Ricinus communis] gi|22352810...   125   2e-26
ref|XP_002267619.2| PREDICTED: uncharacterized protein LOC100254...   123   4e-26
ref|XP_002320529.1| predicted protein [Populus trichocarpa] gi|2...   123   6e-26

>ref|XP_003545095.1| PREDICTED: RPM1-interacting protein 4-like [Glycine max]
          Length = 78

 Score =  128 bits (321), Expect = 2e-27
 Identities = 60/78 (76%), Positives = 63/78 (80%)
 Frame = -1

Query: 609 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPEKDEIRTFRQPTDPA 430
           MS+ GRPLPKFGEWDVNDPASAEG+TVIFNKARNEKKTGGKPDSP K      R P DP+
Sbjct: 1   MSDTGRPLPKFGEWDVNDPASAEGYTVIFNKARNEKKTGGKPDSPAKVNNPRTRPPLDPS 60

Query: 429 KPQSKSWFCCIQPSHAES 376
           K QSK WFCCIQ   AES
Sbjct: 61  KTQSKKWFCCIQSPPAES 78


>gb|AFK47855.1| unknown [Medicago truncatula]
          Length = 79

 Score =  125 bits (313), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -1

Query: 609 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPEKDEIRTFRQPT-DP 433
           MS+ GRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG P+SP K       +P  DP
Sbjct: 1   MSDNGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGNPESPGKTATEPHSKPALDP 60

Query: 432 AKPQSKSWFCCIQPSHAES 376
           AKPQSK WFCC+Q   AES
Sbjct: 61  AKPQSKKWFCCMQNPPAES 79


>ref|XP_002532206.1| NOI, putative [Ricinus communis] gi|223528102|gb|EEF30175.1| NOI,
           putative [Ricinus communis]
          Length = 77

 Score =  125 bits (313), Expect = 2e-26
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = -1

Query: 609 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPEKDEIRTFRQPTDPA 430
           M++KGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSP KD        T   
Sbjct: 1   MADKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKDNSGYKPGTTTLG 60

Query: 429 KPQSKSWFCCIQPSHAE 379
           KPQSK WFCCIQ + AE
Sbjct: 61  KPQSKKWFCCIQSAPAE 77


>ref|XP_002267619.2| PREDICTED: uncharacterized protein LOC100254625 [Vitis vinifera]
           gi|296085047|emb|CBI28462.3| unnamed protein product
           [Vitis vinifera]
          Length = 77

 Score =  123 bits (309), Expect = 4e-26
 Identities = 55/78 (70%), Positives = 66/78 (84%)
 Frame = -1

Query: 609 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPEKDEIRTFRQPTDPA 430
           MSEKG+PLPKFG+WDVNDP SA+GFT+IFNKAR+EKKTGGKPDSP K++   F+   D  
Sbjct: 1   MSEKGQPLPKFGDWDVNDPTSADGFTMIFNKARDEKKTGGKPDSPAKED-SAFKHGADLG 59

Query: 429 KPQSKSWFCCIQPSHAES 376
           KPQSK WFCC+Q ++AES
Sbjct: 60  KPQSKKWFCCMQSTYAES 77


>ref|XP_002320529.1| predicted protein [Populus trichocarpa] gi|222861302|gb|EEE98844.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score =  123 bits (308), Expect = 6e-26
 Identities = 59/79 (74%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
 Frame = -1

Query: 609 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPEKDEIRTFR--QPTD 436
           M+EK +PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSP KD   T++    T 
Sbjct: 1   MAEKDQPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKDS-STYKPGATTT 59

Query: 435 PAKPQSKSWFCCIQPSHAE 379
             KPQ+K WFCCIQ +HAE
Sbjct: 60  LGKPQTKKWFCCIQATHAE 78


Top