BLASTX nr result

ID: Coptis21_contig00004702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004702
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634717.1| PREDICTED: trigger factor isoform 2 [Vitis v...    85   5e-15
ref|XP_002321534.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002277545.1| PREDICTED: trigger factor isoform 1 [Vitis v...    80   2e-13
ref|XP_004161884.1| PREDICTED: trigger factor-like protein TIG-l...    79   5e-13
ref|XP_004149343.1| PREDICTED: trigger factor-like protein TIG-l...    79   5e-13

>ref|XP_003634717.1| PREDICTED: trigger factor isoform 2 [Vitis vinifera]
          Length = 491

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -1

Query: 159 DKLPADIEVTETKEPSSRVRLNVIVPPVVCEDCYKRVLAEFTKQAKVEGRAL 4
           D+LPAD+EVTET+EP+SRVRL+V VP VVCEDCY+RV+ EFTK AKV GRAL
Sbjct: 79  DRLPADVEVTETEEPNSRVRLSVEVPAVVCEDCYQRVIREFTKLAKVAGRAL 130


>ref|XP_002321534.1| predicted protein [Populus trichocarpa] gi|222868530|gb|EEF05661.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = -1

Query: 159 DKLPADIEVTETKEPSSRVRLNVIVPPVVCEDCYKRVLAEFTKQAKVEG 13
           D+LPADI+VTET EP+SR+RL+V VPP VCEDCYKRV+ EFTKQAKV G
Sbjct: 71  DRLPADIKVTETPEPNSRIRLSVEVPPAVCEDCYKRVMNEFTKQAKVPG 119


>ref|XP_002277545.1| PREDICTED: trigger factor isoform 1 [Vitis vinifera]
           gi|297737496|emb|CBI26697.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = -1

Query: 159 DKLPADIEVTETKEPSSRVRLNVIVPPVVCEDCYKRVLAEFTKQAKVEG 13
           D+LPAD+EVTET+EP+SRVRL+V VP VVCEDCY+RV+ EFTK AK+ G
Sbjct: 79  DRLPADVEVTETEEPNSRVRLSVEVPAVVCEDCYQRVIREFTKLAKIPG 127


>ref|XP_004161884.1| PREDICTED: trigger factor-like protein TIG-like [Cucumis sativus]
          Length = 538

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/51 (64%), Positives = 45/51 (88%)
 Frame = -1

Query: 165 KVDKLPADIEVTETKEPSSRVRLNVIVPPVVCEDCYKRVLAEFTKQAKVEG 13
           K+DKLPAD++++ET+EP+S VRL+V VPP VCEDC++RV+AEF KQ K+ G
Sbjct: 80  KIDKLPADLDISETEEPNSSVRLSVGVPPAVCEDCHRRVMAEFMKQVKIPG 130


>ref|XP_004149343.1| PREDICTED: trigger factor-like protein TIG-like [Cucumis sativus]
          Length = 538

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/51 (64%), Positives = 45/51 (88%)
 Frame = -1

Query: 165 KVDKLPADIEVTETKEPSSRVRLNVIVPPVVCEDCYKRVLAEFTKQAKVEG 13
           K+DKLPAD++++ET+EP+S VRL+V VPP VCEDC++RV+AEF KQ K+ G
Sbjct: 80  KIDKLPADLDISETEEPNSSVRLSVGVPPAVCEDCHRRVMAEFMKQVKIPG 130


Top