BLASTX nr result

ID: Coptis21_contig00004637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004637
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   297   3e-78
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...   291   1e-76
emb|CBI16424.3| unnamed protein product [Vitis vinifera]              291   1e-76

>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  306 bits (785), Expect = 4e-81
 Identities = 163/262 (62%), Positives = 195/262 (74%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1056 KLSLEFPISLRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLKTGTNTSQLDWITAI 877
            KLSL+ PISLRTEAI DDR + ASIQAILYGPYLLAG +SGDW+LK G+  S  D IT I
Sbjct: 594  KLSLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPI 653

Query: 876  PPSYNXXXXXXXXXXSNETFVLMNSNNTITVEKIPESGTDAALQATFRFVSEDLNSSHSF 697
            P SYN           N TFVL NSN +IT+E+ P+SGTDA LQATFR V  D +SS   
Sbjct: 654  PASYNEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVL 713

Query: 696  SENNFIGKTVMMEPFDLPGLLVVQQGKNQTLAVGDT---EGSSMFRVVKGLD-KKGTVSL 529
              N+ I K+VM+EPFDLPG+L+VQQGK+ +LAV ++   +GSS+F VV GLD K GTVSL
Sbjct: 714  GINDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSL 773

Query: 528  ESVSQKGCFLYTGVNYKAGTKIKLSCQSGLKDVAFPQATSFKLSKGLSEYHPISFVANGA 349
            ES SQ+GC++Y+GVNYK+G  +KLSC+ G  D  F Q  SF ++KGLSEYHPISFVA G 
Sbjct: 774  ESGSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGD 833

Query: 348  KRKFLLMPLLSMRDESYTVYFN 283
            KR FLL PL S+RDE YT+YFN
Sbjct: 834  KRNFLLAPLHSLRDEFYTIYFN 855


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  301 bits (770), Expect = 2e-79
 Identities = 159/263 (60%), Positives = 197/263 (74%), Gaps = 5/263 (1%)
 Frame = -3

Query: 1056 KLSLEFPISLRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLKTGTNTSQLDWITAI 877
            KL+L+ PISLRTEAI D+R E AS+QAILYGPYLLAG +SGDW+LK+G+  S  D IT I
Sbjct: 593  KLTLQIPISLRTEAIKDERHEYASVQAILYGPYLLAGHTSGDWNLKSGSGNSLSDSITPI 652

Query: 876  PPSYNXXXXXXXXXXSNETFVLMNSNNTITVEKIPESGTDAALQATFRFVSEDLNSSHSF 697
            P SYN             TFVL NSN +I++EK+PESGTDA+LQATFR V +D +SS   
Sbjct: 653  PGSYNGQLVSFSQESGISTFVLTNSNQSISMEKLPESGTDASLQATFRLVFKDSSSSKLS 712

Query: 696  SENNFIGKTVMMEPFDLPGLLVVQQGKNQTLAV---GDTEGSSMFRVVKGLD-KKGTVSL 529
            S  + IGK+VM+EPF LPG+L+VQQGK+++  +    D +GSS+FRVV GLD K GTVSL
Sbjct: 713  SVKDVIGKSVMLEPFHLPGMLLVQQGKDRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSL 772

Query: 528  ESVSQKGCFLYTGVNYKAGTKIKLSCQSG-LKDVAFPQATSFKLSKGLSEYHPISFVANG 352
            ES  Q GC++Y+GV+YK+G  +KLSC+SG   D  F Q  SF ++KGLS+YHPISFVA G
Sbjct: 773  ESGIQNGCYVYSGVDYKSGQSMKLSCKSGSSSDTGFNQGASFVMNKGLSQYHPISFVAKG 832

Query: 351  AKRKFLLMPLLSMRDESYTVYFN 283
             KR FLL PL S+RDESYT+YFN
Sbjct: 833  DKRNFLLAPLHSLRDESYTIYFN 855


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  297 bits (760), Expect = 3e-78
 Identities = 156/263 (59%), Positives = 189/263 (71%), Gaps = 5/263 (1%)
 Frame = -3

Query: 1056 KLSLEFPISLRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLKTGTNTSQLDWITAI 877
            KL+L+ PI LRTEAI DDRP+ ASIQAILYGPYLLAGL+S DWD+KTG+ TS  DWIT I
Sbjct: 599  KLTLQLPIRLRTEAIKDDRPKYASIQAILYGPYLLAGLTSDDWDIKTGSATSLSDWITPI 658

Query: 876  PPSYNXXXXXXXXXXSNETFVLMNSNNTITVEKIPESGTDAALQATFRFVSEDLNSSHSF 697
            P S N           N +FV  NSN +IT+EK PE GTDA+L ATFR V +D  S    
Sbjct: 659  PASDNSRLVSLSQESGNSSFVFSNSNQSITMEKFPEEGTDASLHATFRLVLKDATSLKVL 718

Query: 696  SENNFIGKTVMMEPFDLPGLLVVQQGKNQTLAVGDTEG--SSMFRVVKGLD-KKGTVSLE 526
            S  + IGK+VM+EP DLPG++VVQQG NQ L + ++     S+F +V GLD K GTVSLE
Sbjct: 719  SPKDAIGKSVMLEPIDLPGMVVVQQGTNQNLGIANSAAGKGSLFHLVAGLDGKDGTVSLE 778

Query: 525  SVSQKGCFLYTGVNYKAGTKIKLS--CQSGLKDVAFPQATSFKLSKGLSEYHPISFVANG 352
            S SQK C++Y+G++Y +GT IKL    +SG  D  F +ATSF L +G+S+YHPISFVA G
Sbjct: 779  SESQKDCYVYSGIDYNSGTSIKLKSLSESGSSDEDFNKATSFILKEGISQYHPISFVAKG 838

Query: 351  AKRKFLLMPLLSMRDESYTVYFN 283
             KR FLL PLL +RDESYTVYFN
Sbjct: 839  MKRNFLLTPLLGLRDESYTVYFN 861


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score =  291 bits (746), Expect = 1e-76
 Identities = 150/267 (56%), Positives = 189/267 (70%), Gaps = 4/267 (1%)
 Frame = -3

Query: 1056 KLSLEFPISLRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLKTGTNTSQLDWITAI 877
            KL+L+ PI+LRTEAI DDRP+ A +QAILYGPYLL GL++ DWD++T    S  DWIT I
Sbjct: 602  KLTLQLPIALRTEAIKDDRPKYACLQAILYGPYLLVGLTNNDWDIQTDLAASLSDWITPI 661

Query: 876  PPSYNXXXXXXXXXXSNETFVLMNSNNTITVEKIPESGTDAALQATFRFVSEDLNSSHSF 697
            P S+N           N +F   NSN ++T+E+ PESGTDA+L ATFR + ED  SS   
Sbjct: 662  PASHNSHLISLSQESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKIS 721

Query: 696  SENNFIGKTVMMEPFDLPGLLVVQQGKNQTLAVGDTE---GSSMFRVVKGLD-KKGTVSL 529
            S  + IGK VM+EP + PG+ VVQ+G N++L + ++    GSS+F +V GLD K GTVSL
Sbjct: 722  SPKDAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSL 781

Query: 528  ESVSQKGCFLYTGVNYKAGTKIKLSCQSGLKDVAFPQATSFKLSKGLSEYHPISFVANGA 349
            ES +QKGCF+Y+ VNY +G+ IKL C+    DV F QATSF L  G+SEYHPISFVA G 
Sbjct: 782  ESKTQKGCFVYSDVNYDSGSAIKLKCKLASSDVVFNQATSFTLKHGISEYHPISFVAKGL 841

Query: 348  KRKFLLMPLLSMRDESYTVYFNRGA*N 268
            +R +LL PLLS+RDESYTVYFN  A N
Sbjct: 842  RRDYLLAPLLSLRDESYTVYFNIQASN 868


>emb|CBI16424.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  291 bits (746), Expect = 1e-76
 Identities = 150/267 (56%), Positives = 189/267 (70%), Gaps = 4/267 (1%)
 Frame = -3

Query: 1056 KLSLEFPISLRTEAISDDRPESASIQAILYGPYLLAGLSSGDWDLKTGTNTSQLDWITAI 877
            KL+L+ PI+LRTEAI DDRP+ A +QAILYGPYLL GL++ DWD++T    S  DWIT I
Sbjct: 469  KLTLQLPIALRTEAIKDDRPKYACLQAILYGPYLLVGLTNNDWDIQTDLAASLSDWITPI 528

Query: 876  PPSYNXXXXXXXXXXSNETFVLMNSNNTITVEKIPESGTDAALQATFRFVSEDLNSSHSF 697
            P S+N           N +F   NSN ++T+E+ PESGTDA+L ATFR + ED  SS   
Sbjct: 529  PASHNSHLISLSQESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKIS 588

Query: 696  SENNFIGKTVMMEPFDLPGLLVVQQGKNQTLAVGDTE---GSSMFRVVKGLD-KKGTVSL 529
            S  + IGK VM+EP + PG+ VVQ+G N++L + ++    GSS+F +V GLD K GTVSL
Sbjct: 589  SPKDAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSL 648

Query: 528  ESVSQKGCFLYTGVNYKAGTKIKLSCQSGLKDVAFPQATSFKLSKGLSEYHPISFVANGA 349
            ES +QKGCF+Y+ VNY +G+ IKL C+    DV F QATSF L  G+SEYHPISFVA G 
Sbjct: 649  ESKTQKGCFVYSDVNYDSGSAIKLKCKLASSDVVFNQATSFTLKHGISEYHPISFVAKGL 708

Query: 348  KRKFLLMPLLSMRDESYTVYFNRGA*N 268
            +R +LL PLLS+RDESYTVYFN  A N
Sbjct: 709  RRDYLLAPLLSLRDESYTVYFNIQASN 735


Top