BLASTX nr result

ID: Coptis21_contig00004609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004609
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551879.1| PREDICTED: uncharacterized protein LOC100789...   104   2e-20
ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258...   103   6e-20
ref|XP_003600113.1| hypothetical protein MTR_3g052260 [Medicago ...    99   2e-18
ref|XP_002304472.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|NP_001242491.1| uncharacterized protein LOC100786583 [Glycin...    97   4e-18

>ref|XP_003551879.1| PREDICTED: uncharacterized protein LOC100789832 [Glycine max]
          Length = 183

 Score =  104 bits (260), Expect = 2e-20
 Identities = 60/132 (45%), Positives = 71/132 (53%)
 Frame = -3

Query: 832 VEWICWLNGQRKIAPTPXXXXXXXXXXXRVKLNXXXXXXXXXXXXXXXESSRQRMRIGKV 653
           VEWICWLNGQRK APTP           RV+ N                S  +R+  GKV
Sbjct: 57  VEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEEERITKEGSKGKRVSTGKV 116

Query: 652 GGPDLKSFIQQYPTTSSKGDGQEEDAKVVNGSTGRYRNSIQTEEERLTTEHAESLEPTGS 473
            GPDLKSFIQQ P  SS+G   EE    + G      +  + E++      +ES EPTGS
Sbjct: 117 SGPDLKSFIQQLPV-SSEGKEVEEPPSAMGGLRNPQESLAEKEKDE-----SESSEPTGS 170

Query: 472 GASFKPGTWQPP 437
           GASF+PGTWQPP
Sbjct: 171 GASFRPGTWQPP 182


>ref|XP_002279917.1| PREDICTED: uncharacterized protein LOC100258888 [Vitis vinifera]
           gi|297737442|emb|CBI26643.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  103 bits (256), Expect = 6e-20
 Identities = 60/132 (45%), Positives = 77/132 (58%)
 Frame = -3

Query: 832 VEWICWLNGQRKIAPTPXXXXXXXXXXXRVKLNXXXXXXXXXXXXXXXESSRQRMRIGKV 653
           VEWICWLNGQRK+APTP           RV+LN                S+R+ ++ GKV
Sbjct: 57  VEWICWLNGQRKVAPTPEEMIELEARRERVRLN-VALLKEEEERKAKEGSTRKVVKTGKV 115

Query: 652 GGPDLKSFIQQYPTTSSKGDGQEEDAKVVNGSTGRYRNSIQTEEERLTTEHAESLEPTGS 473
           GGPDLKSFI+Q+P  +S+GD  EE +  ++      RN  +T          ++ EPTG+
Sbjct: 116 GGPDLKSFIRQFP-AASEGDKMEEASDAMDD----MRNPKET----------DTTEPTGT 160

Query: 472 GASFKPGTWQPP 437
           GASFKPGTWQPP
Sbjct: 161 GASFKPGTWQPP 172


>ref|XP_003600113.1| hypothetical protein MTR_3g052260 [Medicago truncatula]
           gi|355489161|gb|AES70364.1| hypothetical protein
           MTR_3g052260 [Medicago truncatula]
          Length = 183

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 60/133 (45%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
 Frame = -3

Query: 832 VEWICWLNGQRKIAPTPXXXXXXXXXXXRVKLNXXXXXXXXXXXXXXXESSRQRM-RIGK 656
           VEWICWLNGQRK APTP           +VK N                S  +R+   G 
Sbjct: 57  VEWICWLNGQRKRAPTPEEQMELDARREQVKQNVALLKKEEEERKAKEGSRVRRVVNKGN 116

Query: 655 VGGPDLKSFIQQYPTTSSKGDGQEEDAKVVNGSTGRYRNSIQTEEERLTTEHAESLEPTG 476
           VGGPDLKSF+QQ+P  SS+G+  EE      G+    R S  +++     +  E+ EPTG
Sbjct: 117 VGGPDLKSFMQQFPV-SSEGNEVEESP----GTRDDLRKSQDSKDN--AEDELETSEPTG 169

Query: 475 SGASFKPGTWQPP 437
           SGASFKPGTWQPP
Sbjct: 170 SGASFKPGTWQPP 182


>ref|XP_002304472.1| predicted protein [Populus trichocarpa] gi|222841904|gb|EEE79451.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 58/132 (43%), Positives = 70/132 (53%)
 Frame = -3

Query: 832 VEWICWLNGQRKIAPTPXXXXXXXXXXXRVKLNXXXXXXXXXXXXXXXESSRQRMRIGKV 653
           VEWICWLNGQRK APTP            VK N                SS +    GK 
Sbjct: 57  VEWICWLNGQRKRAPTPEELIEMEARRELVKQNVALLKQEEEERRAREGSSCKSTSAGKT 116

Query: 652 GGPDLKSFIQQYPTTSSKGDGQEEDAKVVNGSTGRYRNSIQTEEERLTTEHAESLEPTGS 473
           GGPDLKSFI+Q+PT +S+G+  EE++  V+    R R+S                EPTGS
Sbjct: 117 GGPDLKSFIRQFPT-ASEGNKLEEESDAVD----RARHS----------------EPTGS 155

Query: 472 GASFKPGTWQPP 437
           G++FKPGTWQPP
Sbjct: 156 GSTFKPGTWQPP 167


>ref|NP_001242491.1| uncharacterized protein LOC100786583 [Glycine max]
           gi|255640704|gb|ACU20636.1| unknown [Glycine max]
          Length = 182

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 57/132 (43%), Positives = 69/132 (52%)
 Frame = -3

Query: 832 VEWICWLNGQRKIAPTPXXXXXXXXXXXRVKLNXXXXXXXXXXXXXXXESSRQRMRIGKV 653
           VEWICWLNGQRK APTP            V+ N                S  +R+  GKV
Sbjct: 57  VEWICWLNGQRKKAPTPEEMMELEARRECVRQNVALLKKEEERIAKEG-SKGKRVSTGKV 115

Query: 652 GGPDLKSFIQQYPTTSSKGDGQEEDAKVVNGSTGRYRNSIQTEEERLTTEHAESLEPTGS 473
            GPDLKSFIQQ+P  S +G    E    ++G         + E++      +ES EPTGS
Sbjct: 116 SGPDLKSFIQQFPVPS-EGKEVGESPSAMDGLRNPQDGLAEKEKDE-----SESSEPTGS 169

Query: 472 GASFKPGTWQPP 437
           GASF+PGTWQPP
Sbjct: 170 GASFRPGTWQPP 181


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