BLASTX nr result

ID: Coptis21_contig00004602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004602
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vini...   335   1e-89
emb|CBI37700.3| unnamed protein product [Vitis vinifera]              333   8e-89
ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|2...   320   6e-85
ref|XP_002527793.1| expressed protein, putative [Ricinus communi...   320   7e-85
ref|XP_002280933.1| PREDICTED: protein BCCIP homolog [Vitis vini...   309   1e-81

>ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera]
          Length = 335

 Score =  335 bits (860), Expect = 1e-89
 Identities = 180/333 (54%), Positives = 224/333 (67%), Gaps = 9/333 (2%)
 Frame = -2

Query: 1287 EPVFPTMPRRPTKPQ-----LLLGFSPFCRFVALAXXXXXXXXXXXXXXXXXXXSP---G 1132
            +P    MPR+PT+ +     L   FSPF R VA                      P   G
Sbjct: 4    QPTIKEMPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAG 63

Query: 1131 NGVVGKSSNKEKRKRIQXXXXXXXXXXXEVQADFAFFDPKGDDFSGVKMLLKNYLDDKEW 952
            NG++  +  ++     Q             QA+FAFFDPK DDF GVK+LL+ YLD+K W
Sbjct: 64   NGIINHTLEEKSE---QSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLW 120

Query: 951  DLSGFVDLILGQPTVGTVIKIEGDEDDTPYSIVSVLNLGRYKDHRCIMEIKEFLLEVCR- 775
            DLSGFVDLILGQ TVGTV+KIEGDEDD  +S+++ LNLGRYK H+C+ME+KEFLL+V + 
Sbjct: 121  DLSGFVDLILGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQE 180

Query: 774  KDVTRDLRVLLEKQAHNVGLLVSQHVVNXXXXXXXXLFDGLFDEVSWATEDEPTKELQES 595
            KDV   LR+LL ++A NVGLLVSQ VVN        L+D LFDE+SWATEDEPT+EL+ S
Sbjct: 181  KDVKDALRLLLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSS 240

Query: 594  FRFRYYILATKVYKHKNTDQKGTSKGSTDDPIIYIKPEDEIFHKLSSWSFSFALRTEQHV 415
            F F++++L +++YKHKN  Q+  ++   D+ IIYIKPEDEIFHKLSSWSFSF L T+   
Sbjct: 241  FCFKFFLLISRIYKHKNAGQRKGTRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVT 300

Query: 414  AQELRNYRLTGLVMAIEADKVQFFRKELHSLIN 316
              ELRNYRL GLVMAIEADKV  FRKELH+LI+
Sbjct: 301  THELRNYRLMGLVMAIEADKVSTFRKELHTLID 333


>emb|CBI37700.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  333 bits (853), Expect = 8e-89
 Identities = 179/327 (54%), Positives = 222/327 (67%), Gaps = 9/327 (2%)
 Frame = -2

Query: 1269 MPRRPTKPQ-----LLLGFSPFCRFVALAXXXXXXXXXXXXXXXXXXXSP---GNGVVGK 1114
            MPR+PT+ +     L   FSPF R VA                      P   GNG++  
Sbjct: 63   MPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNGIINH 122

Query: 1113 SSNKEKRKRIQXXXXXXXXXXXEVQADFAFFDPKGDDFSGVKMLLKNYLDDKEWDLSGFV 934
            +  ++     Q             QA+FAFFDPK DDF GVK+LL+ YLD+K WDLSGFV
Sbjct: 123  TLEEKSE---QSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGFV 179

Query: 933  DLILGQPTVGTVIKIEGDEDDTPYSIVSVLNLGRYKDHRCIMEIKEFLLEVCR-KDVTRD 757
            DLILGQ TVGTV+KIEGDEDD  +S+++ LNLGRYK H+C+ME+KEFLL+V + KDV   
Sbjct: 180  DLILGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKDA 239

Query: 756  LRVLLEKQAHNVGLLVSQHVVNXXXXXXXXLFDGLFDEVSWATEDEPTKELQESFRFRYY 577
            LR+LL ++A NVGLLVSQ VVN        L+D LFDE+SWATEDEPT+EL+ SF F+++
Sbjct: 240  LRLLLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKFF 299

Query: 576  ILATKVYKHKNTDQKGTSKGSTDDPIIYIKPEDEIFHKLSSWSFSFALRTEQHVAQELRN 397
            +L +++YKHKN  Q+  ++   D+ IIYIKPEDEIFHKLSSWSFSF L T+     ELRN
Sbjct: 300  LLISRIYKHKNAGQRKGTRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHELRN 359

Query: 396  YRLTGLVMAIEADKVQFFRKELHSLIN 316
            YRL GLVMAIEADKV  FRKELH+LI+
Sbjct: 360  YRLMGLVMAIEADKVSTFRKELHTLID 386


>ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  320 bits (820), Expect = 6e-85
 Identities = 163/272 (59%), Positives = 203/272 (74%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1128 GVVGKSSNKEKRKRIQXXXXXXXXXXXEVQADFAFFDPKGDDFSGVKMLLKNYLDDKEWD 949
            G V K ++KEK +  Q           EVQADFAFFDPK DDF GVK+LL++YLD+ EWD
Sbjct: 66   GAVVKKTSKEKIE--QSESSEEEEFGGEVQADFAFFDPKPDDFHGVKILLQSYLDNTEWD 123

Query: 948  LSGFVDLILGQPTVGTVIKIEGDEDDTPYSIVSVLNLGRYKDHRCIMEIKEFLLEVC-RK 772
            LSGFVDLIL Q TVGTV+KIE DED+  +S+VS LNLGRYKDH+CI ++KE+LL++C  K
Sbjct: 124  LSGFVDLILEQTTVGTVVKIEDDEDNGLFSVVSALNLGRYKDHKCIADLKEYLLKLCLEK 183

Query: 771  DVTRDLRVLLEKQAHNVGLLVSQHVVNXXXXXXXXLFDGLFDEVSWATEDEPTKELQESF 592
             +  DLRVLL +QAHNVGLLVS+ VVN        L+D LFDE+SWATEDEPT+EL+ SF
Sbjct: 184  SIKGDLRVLLGEQAHNVGLLVSRRVVNLPPQLLPPLYDSLFDEISWATEDEPTEELRNSF 243

Query: 591  RFRYYILATKVYKHKNTDQKGTSKGSTDDPIIYIKPEDEIFHKLSSWSFSFALRTEQHVA 412
             F  Y+L +K+YKHKN D+K      +++ IIY+ PEDEIFHKLS WSF+F    EQ  A
Sbjct: 244  CFNSYVLVSKMYKHKNADKKNRLSSDSEEAIIYVNPEDEIFHKLSLWSFNFPFHAEQVTA 303

Query: 411  QELRNYRLTGLVMAIEADKVQFFRKELHSLIN 316
            +EL+NYR  GLVMA+EADK+  FR++L SLI+
Sbjct: 304  RELKNYRPMGLVMAVEADKISTFREQLRSLID 335


>ref|XP_002527793.1| expressed protein, putative [Ricinus communis]
            gi|223532828|gb|EEF34603.1| expressed protein, putative
            [Ricinus communis]
          Length = 324

 Score =  320 bits (819), Expect = 7e-85
 Identities = 166/276 (60%), Positives = 204/276 (73%), Gaps = 1/276 (0%)
 Frame = -2

Query: 1134 GNGVVGKSSNKEKRKRIQXXXXXXXXXXXEVQADFAFFDPKGDDFSGVKMLLKNYLDDKE 955
            G+G++ K S+KEK K  Q            +QADF FFDPK DDF GVK+LL+ YLD+KE
Sbjct: 53   GDGII-KHSSKEKNK--QSESSEEEELEGFIQADFVFFDPKPDDFHGVKILLQTYLDNKE 109

Query: 954  WDLSGFVDLILGQPTVGTVIKIEGDEDDTPYSIVSVLNLGRYKDHRCIMEIKEFLLEVC- 778
            WDLSGFVD+ILGQ TVGTV+KIE DED   +S+ +VLNL RYKDH+CIM+IKEFL++VC 
Sbjct: 110  WDLSGFVDIILGQTTVGTVVKIEDDEDGL-FSVTTVLNLRRYKDHKCIMDIKEFLIKVCL 168

Query: 777  RKDVTRDLRVLLEKQAHNVGLLVSQHVVNXXXXXXXXLFDGLFDEVSWATEDEPTKELQE 598
             +++  DLR+LL +QA  VGLLVSQ VVN        L+D LFDEV WATEDEPT+EL++
Sbjct: 169  ERNILDDLRLLLGEQAQYVGLLVSQRVVNLPPELLPPLYDALFDEVLWATEDEPTEELRK 228

Query: 597  SFRFRYYILATKVYKHKNTDQKGTSKGSTDDPIIYIKPEDEIFHKLSSWSFSFALRTEQH 418
            SF F+ Y+L TK+YKHKN DQK       ++ IIYIKPEDEIF+K  SWSF F L +E  
Sbjct: 229  SFCFKSYLLITKIYKHKNADQKKRQSSDNEEAIIYIKPEDEIFYKHCSWSFCFPLHSEHV 288

Query: 417  VAQELRNYRLTGLVMAIEADKVQFFRKELHSLINGS 310
               ELRNYRL GLVMA+EAD++  FR+ELHSLI+ S
Sbjct: 289  TTHELRNYRLMGLVMAVEADEISKFREELHSLIDES 324


>ref|XP_002280933.1| PREDICTED: protein BCCIP homolog [Vitis vinifera]
          Length = 333

 Score =  309 bits (792), Expect = 1e-81
 Identities = 172/325 (52%), Positives = 207/325 (63%), Gaps = 5/325 (1%)
 Frame = -2

Query: 1275 PTMPRRPTKPQLL----LGFSPFCRFVALAXXXXXXXXXXXXXXXXXXXSPGNGVVGKSS 1108
            P  P R  + QLL      FSPF R V+                      P        +
Sbjct: 2    PRKPARRRRRQLLRPLPFSFSPFSRTVSQVASYCKVNHQIHVSKLDRKSPPNAAGNRFIN 61

Query: 1107 NKEKRKRIQXXXXXXXXXXXEVQADFAFFDPKGDDFSGVKMLLKNYLDDKEWDLSGFVDL 928
            +  + K  +             QADFAFFDPK DDF GVK+LL+ YLD+K+WDLSGFVDL
Sbjct: 62   HTLEEKSARSESSEEDSSEVVAQADFAFFDPKPDDFHGVKILLQTYLDNKQWDLSGFVDL 121

Query: 927  ILGQPTVGTVIKIEGDEDDTPYSIVSVLNLGRYKDHRCIMEIKEFLLEV-CRKDVTRDLR 751
            ILG  TVGTV+KIE DEDD  +S+++ LNLGRYKDH+CIME+KEFLL+V   +DV   LR
Sbjct: 122  ILGNTTVGTVVKIEDDEDDGVFSLITALNLGRYKDHKCIMELKEFLLKVGPEEDVKDSLR 181

Query: 750  VLLEKQAHNVGLLVSQHVVNXXXXXXXXLFDGLFDEVSWATEDEPTKELQESFRFRYYIL 571
            +LL ++AHNVGL VSQ VVN        L D LFDEVSWATEDEPT EL+ SF F+ Y+L
Sbjct: 182  LLLGEEAHNVGLSVSQCVVNLPPQLLPPLCDALFDEVSWATEDEPTVELRSSFSFKIYLL 241

Query: 570  ATKVYKHKNTDQKGTSKGSTDDPIIYIKPEDEIFHKLSSWSFSFALRTEQHVAQELRNYR 391
             +++YKHKN DQK   +G  D+ IIYIK EDEIFHKL SWSFSF L T+      LRNY+
Sbjct: 242  ISRIYKHKNADQKKGPRGDVDEAIIYIKLEDEIFHKL-SWSFSFPLHTQHVATHRLRNYQ 300

Query: 390  LTGLVMAIEADKVQFFRKELHSLIN 316
            L  LVMAIEADK   F KELH+L++
Sbjct: 301  LMWLVMAIEADKASTFWKELHTLLD 325


Top