BLASTX nr result

ID: Coptis21_contig00004553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004553
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79046.1| hypothetical protein VITISV_035826 [Vitis vinifera]    98   8e-19
emb|CAN68065.1| hypothetical protein VITISV_014899 [Vitis vinifera]    97   1e-18
emb|CAN69497.1| hypothetical protein VITISV_033826 [Vitis vinifera]    97   2e-18
ref|XP_002266199.1| PREDICTED: uncharacterized protein LOC100244...    96   2e-18
ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783...    96   4e-18

>emb|CAN79046.1| hypothetical protein VITISV_035826 [Vitis vinifera]
          Length = 435

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/81 (62%), Positives = 60/81 (74%)
 Frame = -1

Query: 245 VGLSKLSKVADVFARRLQDPQRLADEVCSSLYNGIRPACVGVVLQCWHIEFPQVDCTCRD 66
           VGLSKLS+VADVFA+RLQDPQRLADEVCS+L +GI+PA V VVLQC HI FP ++    D
Sbjct: 114 VGLSKLSRVADVFAKRLQDPQRLADEVCSALNHGIKPAGVAVVLQCLHIHFPNLELGFLD 173

Query: 65  QINHPTVMDMQGWSKVSVCAG 3
             +       Q W KVSVC+G
Sbjct: 174 STH-------QEWVKVSVCSG 187


>emb|CAN68065.1| hypothetical protein VITISV_014899 [Vitis vinifera]
          Length = 445

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/81 (61%), Positives = 60/81 (74%)
 Frame = -1

Query: 245 VGLSKLSKVADVFARRLQDPQRLADEVCSSLYNGIRPACVGVVLQCWHIEFPQVDCTCRD 66
           VGLSKLS+VADVFA+RLQDPQRLAD+VCS+L +GI+PA V VVLQC HI FP ++    D
Sbjct: 124 VGLSKLSRVADVFAKRLQDPQRLADDVCSALNHGIKPAGVAVVLQCLHIHFPNLELGLLD 183

Query: 65  QINHPTVMDMQGWSKVSVCAG 3
             +       Q W KVSVC+G
Sbjct: 184 STH-------QEWVKVSVCSG 197


>emb|CAN69497.1| hypothetical protein VITISV_033826 [Vitis vinifera]
          Length = 404

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/81 (61%), Positives = 60/81 (74%)
 Frame = -1

Query: 245 VGLSKLSKVADVFARRLQDPQRLADEVCSSLYNGIRPACVGVVLQCWHIEFPQVDCTCRD 66
           VGLSKLS+VADVFA+RLQDPQRLAD+VCS+L +GI+PA V VVLQC HI FP ++    D
Sbjct: 83  VGLSKLSRVADVFAKRLQDPQRLADDVCSALNHGIKPAGVAVVLQCLHIHFPNLELGFLD 142

Query: 65  QINHPTVMDMQGWSKVSVCAG 3
             +       Q W KVSVC+G
Sbjct: 143 STH-------QEWVKVSVCSG 156


>ref|XP_002266199.1| PREDICTED: uncharacterized protein LOC100244016 [Vitis vinifera]
          Length = 455

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/81 (61%), Positives = 59/81 (72%)
 Frame = -1

Query: 245 VGLSKLSKVADVFARRLQDPQRLADEVCSSLYNGIRPACVGVVLQCWHIEFPQVDCTCRD 66
           VGLSKLS+VADVFA+RLQDPQRLADEVCS+L +GI+P  V VVLQC HI FP ++    D
Sbjct: 134 VGLSKLSRVADVFAKRLQDPQRLADEVCSALNHGIKPTGVAVVLQCLHIHFPNLELGFLD 193

Query: 65  QINHPTVMDMQGWSKVSVCAG 3
             +       Q W KVSVC+G
Sbjct: 194 STH-------QEWVKVSVCSG 207


>ref|XP_003552105.1| PREDICTED: uncharacterized protein LOC100783814 [Glycine max]
          Length = 467

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/81 (58%), Positives = 59/81 (72%)
 Frame = -1

Query: 245 VGLSKLSKVADVFARRLQDPQRLADEVCSSLYNGIRPACVGVVLQCWHIEFPQVDCTCRD 66
           VGLSKLS+VADVFA+RLQ+PQRLADEVCS+L+ GIRPA V ++LQC HI FP ++    D
Sbjct: 138 VGLSKLSRVADVFAKRLQEPQRLADEVCSALHQGIRPAGVAIILQCSHIHFPDIESVFLD 197

Query: 65  QINHPTVMDMQGWSKVSVCAG 3
                   + QGW K+ V +G
Sbjct: 198 S-------NYQGWVKILVSSG 211


Top