BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004497
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsi...   237   4e-69
ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arab...   235   3e-68
ref|XP_003540712.1| PREDICTED: cytochrome c-type biogenesis prot...   233   2e-66
ref|XP_003539061.1| PREDICTED: cytochrome c-type biogenesis prot...   230   7e-66
ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|2...   227   8e-66

>ref|NP_190747.1| transmembrane protein G1P-related 1 [Arabidopsis thaliana]
           gi|1657615|gb|AAB18126.1| G1p [Arabidopsis thaliana]
           gi|3068706|gb|AAC14406.1| putative transmembrane protein
           G1p [Arabidopsis thaliana] gi|28416645|gb|AAO42853.1|
           At3g51790 [Arabidopsis thaliana]
           gi|110743169|dbj|BAE99476.1| Cytochrome C Maturation G1p
           [Arabidopsis thaliana] gi|332645322|gb|AEE78843.1|
           transmembrane protein G1P-related 1 [Arabidopsis
           thaliana]
          Length = 256

 Score =  237 bits (605), Expect(2) = 4e-69
 Identities = 119/184 (64%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
 Frame = +2

Query: 107 FHSIPKIPP-----TSPSLQRFLSTLGRQPSRPTKQNIGLRARQLQNRRLWTYALTFSCI 271
           FHS+    P     +S +  R LS   R P+RP K +IG +ARQ+QNRRLWTYALTFSCI
Sbjct: 35  FHSLTTASPDPSRLSSLTFLRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCI 94

Query: 272 AGFIIIVLNNFQDQLVFYVTPSEALEKFNANPSKNKFRLGGLVLENSVTQPVSSPEMEFI 451
           AGF++IVLN FQDQLVFY+TPS+A+EKF  NP+KNKFRLGGLVLE SV QP +S EMEF+
Sbjct: 95  AGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFV 154

Query: 452 VTDLLTDILVKYEGSLPDLFREGHSVVVEGFIKPHNEESKDECASNRKKCAEKAMELGCY 631
           +TDL+TDILV+Y+GSLPDLFREGHSVVVEGFIKP+ +E + E ++  K  ++KA  L C+
Sbjct: 155 ITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRKEVST--KPISKKARNLDCF 212

Query: 632 FSAT 643
           FSAT
Sbjct: 213 FSAT 216



 Score = 51.2 bits (121), Expect(2) = 4e-69
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +1

Query: 700 EVLAKHDEKYMPQEVAAAIQRNKAKIEADNVLGMARVGA 816
           EVLAKHDEKYMPQEVAAAI++NK  IEA      A V A
Sbjct: 217 EVLAKHDEKYMPQEVAAAIEKNKKIIEAAATEQAAEVAA 255


>ref|XP_002877824.1| hypothetical protein ARALYDRAFT_485534 [Arabidopsis lyrata subsp.
           lyrata] gi|297323662|gb|EFH54083.1| hypothetical protein
           ARALYDRAFT_485534 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  235 bits (600), Expect(2) = 3e-68
 Identities = 118/184 (64%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
 Frame = +2

Query: 107 FHSIPKIPP-----TSPSLQRFLSTLGRQPSRPTKQNIGLRARQLQNRRLWTYALTFSCI 271
           F+S+    P     +S +  R LS   R P+RP K +IG +ARQ+QNRRLWTYALTFSCI
Sbjct: 34  FYSLTTASPDPSRLSSLTFLRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCI 93

Query: 272 AGFIIIVLNNFQDQLVFYVTPSEALEKFNANPSKNKFRLGGLVLENSVTQPVSSPEMEFI 451
           AGF++IVLN FQDQLVFY+TPS+A+EKF  NP+KNKFRLGGLVLE SV QP +S EMEF+
Sbjct: 94  AGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFV 153

Query: 452 VTDLLTDILVKYEGSLPDLFREGHSVVVEGFIKPHNEESKDECASNRKKCAEKAMELGCY 631
           +TDL+TDILV+Y+GSLPDLFREGHSVVVEGFIKP+ +E + E ++  K  ++KA  L C+
Sbjct: 154 ITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRKEVST--KPVSQKARNLDCF 211

Query: 632 FSAT 643
           FSAT
Sbjct: 212 FSAT 215



 Score = 50.4 bits (119), Expect(2) = 3e-68
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 700 EVLAKHDEKYMPQEVAAAIQRNKAKIEA 783
           EVLAKHDEKYMPQEVAAAI++NK  IEA
Sbjct: 216 EVLAKHDEKYMPQEVAAAIEKNKKIIEA 243


>ref|XP_003540712.1| PREDICTED: cytochrome c-type biogenesis protein CcmE-like [Glycine
           max]
          Length = 249

 Score =  233 bits (593), Expect(2) = 2e-66
 Identities = 128/206 (62%), Positives = 152/206 (73%), Gaps = 5/206 (2%)
 Frame = +2

Query: 41  MSSIFRLRHYSRLLHT--LTSQSHFHSIPKIPPTSP--SLQRFLSTLGRQPSRPTKQ-NI 205
           M+S   LR  S LLHT  L   S  H  P I P+ P  SL R LST  R P R  K  +I
Sbjct: 1   MASGLALRFRSHLLHTASLLPSSLLHH-PPIQPSPPHLSLHRLLSTARRTPPRSKKSVDI 59

Query: 206 GLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNANPSKNKFR 385
             RARQLQ RRLWTYALTF  +AGF++IVLNNFQDQLVFYVTP+EALEK+  NP+K +FR
Sbjct: 60  SARARQLQTRRLWTYALTFGGLAGFVVIVLNNFQDQLVFYVTPTEALEKYANNPTKARFR 119

Query: 386 LGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYEGSLPDLFREGHSVVVEGFIKPHNEE 565
           LGGLVLE SV  P SSPE+EF+VTDL++DI+V+YEGSLPDLFREGHSVVVEG +KP  +E
Sbjct: 120 LGGLVLEGSVVYPASSPEVEFVVTDLISDIVVRYEGSLPDLFREGHSVVVEGLVKPFTDE 179

Query: 566 SKDECASNRKKCAEKAMELGCYFSAT 643
            + E ++  K  +EKA ++ CYFSAT
Sbjct: 180 IRKEVSA--KNVSEKARKIECYFSAT 203



 Score = 47.4 bits (111), Expect(2) = 2e-66
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +1

Query: 700 EVLAKHDEKYMPQEVAAAIQRNKAKIE 780
           EVLAKHDEKYMP+EVAAAI++NK  IE
Sbjct: 204 EVLAKHDEKYMPKEVAAAIEKNKKIIE 230


>ref|XP_003539061.1| PREDICTED: cytochrome c-type biogenesis protein CcmE-like [Glycine
           max]
          Length = 240

 Score =  230 bits (587), Expect(2) = 7e-66
 Identities = 123/202 (60%), Positives = 148/202 (73%), Gaps = 1/202 (0%)
 Frame = +2

Query: 41  MSSIFRLRHYSRLLHTLTSQSHFHSIPKIPPTSPSLQRFLSTLGRQPSRPTKQ-NIGLRA 217
           M+S   LR  S LL T +       +  +PP   SL R LST  R P R  K  +IG RA
Sbjct: 1   MASRLALRFRSHLLRTASL------LQTLPPPPLSLHRLLSTSRRAPPRSKKSVDIGARA 54

Query: 218 RQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQLVFYVTPSEALEKFNANPSKNKFRLGGL 397
           RQLQ RRLWTYALTF  +AGF++IVLNNFQDQLVFYVTP+EALEK+  NP+K +FRLGGL
Sbjct: 55  RQLQTRRLWTYALTFGGLAGFVVIVLNNFQDQLVFYVTPTEALEKYATNPTKARFRLGGL 114

Query: 398 VLENSVTQPVSSPEMEFIVTDLLTDILVKYEGSLPDLFREGHSVVVEGFIKPHNEESKDE 577
           VLE SV  P SSPE+EF+VTDL++D++V+YEGSLPDLFREGHSVVVEG +KP  EE + E
Sbjct: 115 VLEGSVVYPASSPEVEFVVTDLISDMVVRYEGSLPDLFREGHSVVVEGLVKPFTEEIRKE 174

Query: 578 CASNRKKCAEKAMELGCYFSAT 643
            +   K  +EKA ++ CYFSAT
Sbjct: 175 VSV--KNVSEKARKIECYFSAT 194



 Score = 47.4 bits (111), Expect(2) = 7e-66
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +1

Query: 700 EVLAKHDEKYMPQEVAAAIQRNKAKIE 780
           EVLAKHDEKYMP+EVAAAI++NK  IE
Sbjct: 195 EVLAKHDEKYMPKEVAAAIEKNKKIIE 221


>ref|XP_002304766.1| predicted protein [Populus trichocarpa] gi|222842198|gb|EEE79745.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  227 bits (578), Expect(2) = 8e-66
 Identities = 118/169 (69%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
 Frame = +2

Query: 137 SPSLQRFLSTLGRQ-PSRPTKQNIGLRARQLQNRRLWTYALTFSCIAGFIIIVLNNFQDQ 313
           S S  RF S   R  P+RP   +IG RARQLQNRRLWTYALTFSCIAGFI+IVLNNFQDQ
Sbjct: 5   SLSTLRFFSASRRHSPTRPKPVDIGARARQLQNRRLWTYALTFSCIAGFIVIVLNNFQDQ 64

Query: 314 LVFYVTPSEALEKFNANPSKNKFRLGGLVLENSVTQPVSSPEMEFIVTDLLTDILVKYEG 493
           LVFY+TPS+A+EKF  NPSKNKFRLGGLVLE SV  P++SPEMEF+VTDL+TDILVKYEG
Sbjct: 65  LVFYITPSDAVEKFKNNPSKNKFRLGGLVLEGSVVHPLTSPEMEFVVTDLITDILVKYEG 124

Query: 494 SLPDLFREGHSVVVEGFIKPHNEESKDECASNRKKCAEKAMELGCYFSA 640
           SLPDLFREGHSVVVEGF+K  +++ + E     K  + KA    CYF A
Sbjct: 125 SLPDLFREGHSVVVEGFMKELDDKVRKEV--GLKNVSGKARSGECYFKA 171



 Score = 50.8 bits (120), Expect(2) = 8e-66
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 700 EVLAKHDEKYMPQEVAAAIQRNKAKIEA 783
           +VLAKHDEKYMPQEVAAAI+RNK  IEA
Sbjct: 173 DVLAKHDEKYMPQEVAAAIERNKKLIEA 200