BLASTX nr result

ID: Coptis21_contig00004489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004489
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-22
emb|CBI15958.3| unnamed protein product [Vitis vinifera]               98   4e-22
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...    98   4e-22
sp|Q8S628.1|PDR13_ORYSJ RecName: Full=Pleiotropic drug resistanc...   100   7e-22
emb|CAD59564.1| PDR-like ABC transpoter [Oryza sativa Japonica G...   100   7e-22

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  105 bits (261), Expect(2) = 2e-22
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -2

Query: 481  LIEQ*SIPGWWIWFYYISPVAWTL*GIVSSQLGDSEDHIVGPGFEGTVKEFLETSLGFGP 302
            L+ Q SIPGWWIWFYYI P+AWTL G++ SQLGD E  IVGPGFEGTVK++LE + G+GP
Sbjct: 1340 LVPQPSIPGWWIWFYYICPIAWTLRGVICSQLGDVETIIVGPGFEGTVKKYLEVTFGYGP 1399

Query: 301  GMVG 290
             M+G
Sbjct: 1400 NMIG 1403



 Score = 25.8 bits (55), Expect(2) = 2e-22
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 266  FVIFFFGIFAISVRKLNF 213
            F + FF +FA+SV+ LNF
Sbjct: 1412 FCLLFFTVFALSVKFLNF 1429


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score = 98.2 bits (243), Expect(2) = 4e-22
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -2

Query: 481  LIEQ*SIPGWWIWFYYISPVAWTL*GIVSSQLGDSEDHIVGPGFEGTVKEFLETSLGFGP 302
            LI +  IPGWWIWFYYI PVAWTL GI+SSQLGD  +  +GPGF+G V ++L   LGFGP
Sbjct: 1391 LIPKPRIPGWWIWFYYICPVAWTLRGIISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGP 1450

Query: 301  GMVG 290
            GM+G
Sbjct: 1451 GMIG 1454



 Score = 31.2 bits (69), Expect(2) = 4e-22
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 269  CFVIFFFGIFAISVRKLNF 213
            CF + FF +FAISV+ LNF
Sbjct: 1462 CFSVLFFSVFAISVKVLNF 1480


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score = 98.2 bits (243), Expect(2) = 4e-22
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -2

Query: 481  LIEQ*SIPGWWIWFYYISPVAWTL*GIVSSQLGDSEDHIVGPGFEGTVKEFLETSLGFGP 302
            LI +  IPGWWIWFYYI PVAWTL GI+SSQLGD  +  +GPGF+G V ++L   LGFGP
Sbjct: 1323 LIPKPRIPGWWIWFYYICPVAWTLRGIISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGP 1382

Query: 301  GMVG 290
            GM+G
Sbjct: 1383 GMIG 1386



 Score = 31.2 bits (69), Expect(2) = 4e-22
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 269  CFVIFFFGIFAISVRKLNF 213
            CF + FF +FAISV+ LNF
Sbjct: 1394 CFSVLFFSVFAISVKVLNF 1412


>sp|Q8S628.1|PDR13_ORYSJ RecName: Full=Pleiotropic drug resistance protein 13
            gi|20279475|gb|AAM18755.1|AC099325_11 putatputative ABC
            transporter [Oryza sativa Japonica Group]
          Length = 1441

 Score =  100 bits (248), Expect(2) = 7e-22
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = -2

Query: 481  LIEQ*SIPGWWIWFYYISPVAWTL*GIVSSQLGDSEDHIVGPGFEGTVKEFLETSLGFGP 302
            LI Q  IPGWWIWFYYI PVAWTL G+++SQLGD +  IVGPGF+GTV EFL+ +LGF  
Sbjct: 1349 LIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGPGFDGTVHEFLQQNLGFEQ 1408

Query: 301  GMVG 290
            GM G
Sbjct: 1409 GMTG 1412



 Score = 28.5 bits (62), Expect(2) = 7e-22
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 266  FVIFFFGIFAISVRKLNF 213
            F +FFF I+AIS++ +NF
Sbjct: 1421 FSVFFFSIYAISIKMINF 1438


>emb|CAD59564.1| PDR-like ABC transpoter [Oryza sativa Japonica Group]
          Length = 1441

 Score =  100 bits (248), Expect(2) = 7e-22
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = -2

Query: 481  LIEQ*SIPGWWIWFYYISPVAWTL*GIVSSQLGDSEDHIVGPGFEGTVKEFLETSLGFGP 302
            LI Q  IPGWWIWFYYI PVAWTL G+++SQLGD +  IVGPGF+GTV EFL+ +LGF  
Sbjct: 1349 LIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGPGFDGTVHEFLQQNLGFEQ 1408

Query: 301  GMVG 290
            GM G
Sbjct: 1409 GMTG 1412



 Score = 28.5 bits (62), Expect(2) = 7e-22
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 266  FVIFFFGIFAISVRKLNF 213
            F +FFF I+AIS++ +NF
Sbjct: 1421 FSVFFFSIYAISIKMINF 1438


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