BLASTX nr result

ID: Coptis21_contig00004488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004488
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
emb|CBI15958.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   167   2e-39
ref|XP_004169718.1| PREDICTED: ABC transporter G family member 3...   163   4e-38
ref|XP_003544291.1| PREDICTED: ABC transporter G family member 3...   162   6e-38

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  168 bits (425), Expect = 1e-39
 Identities = 79/126 (62%), Positives = 93/126 (73%)
 Frame = -2

Query: 774  FYGMMAVGLTPNATLAAVVSSAFYSLWNLLSGFLLPKPSIPGWWIWFYYISPVAWTLRGI 595
            FYGMMAVGLTP+  LAAV+SSAFYSLWNLLSGFL+P+PSIPGWWIWFYYI P+AWTLRG+
Sbjct: 1307 FYGMMAVGLTPSQHLAAVISSAFYSLWNLLSGFLVPQPSIPGWWIWFYYICPIAWTLRGV 1366

Query: 594  VSSQLGDSEDHIVGPGFDGTVKEFLETSLGFGPGMXXXXXXXXXXXXXXXXXXXXXXVRK 415
            + SQLGD E  IVGPGF+GTVK++LE + G+GP M                      V+ 
Sbjct: 1367 ICSQLGDVETIIVGPGFEGTVKKYLEVTFGYGPNMIGASIAALVGFCLLFFTVFALSVKF 1426

Query: 414  LNFQRR 397
            LNFQ+R
Sbjct: 1427 LNFQKR 1432


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score =  167 bits (424), Expect = 2e-39
 Identities = 81/126 (64%), Positives = 89/126 (70%)
 Frame = -2

Query: 774  FYGMMAVGLTPNATLAAVVSSAFYSLWNLLSGFLLPKPSIPGWWIWFYYISPVAWTLRGI 595
            FYGMMAVGLTPN  LAAVVSSAFYSLWNLLSGFL+PKP IPGWWIWFYYI PVAWTLRGI
Sbjct: 1358 FYGMMAVGLTPNQQLAAVVSSAFYSLWNLLSGFLIPKPRIPGWWIWFYYICPVAWTLRGI 1417

Query: 594  VSSQLGDSEDHIVGPGFDGTVKEFLETSLGFGPGMXXXXXXXXXXXXXXXXXXXXXXVRK 415
            +SSQLGD  +  +GPGF G V ++L   LGFGPGM                      V+ 
Sbjct: 1418 ISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGPGMIGVSAVVLICFSVLFFSVFAISVKV 1477

Query: 414  LNFQRR 397
            LNFQ+R
Sbjct: 1478 LNFQKR 1483


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  167 bits (424), Expect = 2e-39
 Identities = 81/126 (64%), Positives = 89/126 (70%)
 Frame = -2

Query: 774  FYGMMAVGLTPNATLAAVVSSAFYSLWNLLSGFLLPKPSIPGWWIWFYYISPVAWTLRGI 595
            FYGMMAVGLTPN  LAAVVSSAFYSLWNLLSGFL+PKP IPGWWIWFYYI PVAWTLRGI
Sbjct: 1290 FYGMMAVGLTPNQQLAAVVSSAFYSLWNLLSGFLIPKPRIPGWWIWFYYICPVAWTLRGI 1349

Query: 594  VSSQLGDSEDHIVGPGFDGTVKEFLETSLGFGPGMXXXXXXXXXXXXXXXXXXXXXXVRK 415
            +SSQLGD  +  +GPGF G V ++L   LGFGPGM                      V+ 
Sbjct: 1350 ISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGPGMIGVSAVVLICFSVLFFSVFAISVKV 1409

Query: 414  LNFQRR 397
            LNFQ+R
Sbjct: 1410 LNFQKR 1415


>ref|XP_004169718.1| PREDICTED: ABC transporter G family member 31-like, partial
           [Cucumis sativus]
          Length = 699

 Score =  163 bits (412), Expect = 4e-38
 Identities = 80/127 (62%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = -2

Query: 774 FYGMMAVGLTPNATLAAVVSSAFYSLWNLLSGFLLPKPSIPGWWIWFYYISPVAWTLRGI 595
           FYGMM VGLTP+  +AAVVSSAFYSLWNLLSGFL+PKPSIPGWWIWFYYI P++WTLRGI
Sbjct: 573 FYGMMTVGLTPSQHMAAVVSSAFYSLWNLLSGFLVPKPSIPGWWIWFYYICPISWTLRGI 632

Query: 594 VSSQLGDSEDHIVGPGFDGTVKEFLETSLGF-GPGMXXXXXXXXXXXXXXXXXXXXXXVR 418
           ++SQLGD E  IVGPGF G+VK++LE SLG+ G GM                      V+
Sbjct: 633 ITSQLGDVETIIVGPGFKGSVKQYLEVSLGYGGNGMIGVSVVVLVAFILLFFTVFAVSVK 692

Query: 417 KLNFQRR 397
            +NFQRR
Sbjct: 693 LINFQRR 699


>ref|XP_003544291.1| PREDICTED: ABC transporter G family member 31-like [Glycine max]
          Length = 1440

 Score =  162 bits (411), Expect = 6e-38
 Identities = 73/91 (80%), Positives = 82/91 (90%)
 Frame = -2

Query: 774  FYGMMAVGLTPNATLAAVVSSAFYSLWNLLSGFLLPKPSIPGWWIWFYYISPVAWTLRGI 595
            FYGMMAVGLTP+  LAAV+SSAFYSLWNLLSGFL+PK SIPGWWIWFYYI P+AWTLRGI
Sbjct: 1310 FYGMMAVGLTPSQHLAAVISSAFYSLWNLLSGFLIPKSSIPGWWIWFYYICPIAWTLRGI 1369

Query: 594  VSSQLGDSEDHIVGPGFDGTVKEFLETSLGF 502
            ++SQLGD E  I+GPGF+GTVKE+L  SLGF
Sbjct: 1370 ITSQLGDVETKIIGPGFEGTVKEYLVVSLGF 1400


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