BLASTX nr result

ID: Coptis21_contig00004481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004481
         (1751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518839.1| conserved hypothetical protein [Ricinus comm...   473   e-131
ref|XP_002264902.1| PREDICTED: uncharacterized protein LOC100253...   465   e-128
ref|XP_002315376.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
ref|XP_002311906.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|XP_002264942.1| PREDICTED: uncharacterized protein LOC100253...   456   e-126

>ref|XP_002518839.1| conserved hypothetical protein [Ricinus communis]
            gi|223542012|gb|EEF43557.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 397

 Score =  473 bits (1216), Expect = e-131
 Identities = 253/377 (67%), Positives = 287/377 (76%), Gaps = 7/377 (1%)
 Frame = +2

Query: 182  MEALSSTIHLQSSQTTCFIKPNVKPTKGYLSFDSRRFSGWDLSV--ERLGALS---TCG- 343
            M+ALSS++ +          P   PT    S  S   S   + +  +R+G+L    T G 
Sbjct: 1    MDALSSSVFVSRF-------PETYPTVQSNSSSSSASSSSVIKILNKRIGSLKFAETAGF 53

Query: 344  GGVIVRSLAREVSDDGGDAKGGVENNEFGFVDDEGGSSWFEGNLSQN-GGNKEVVKDSKT 520
             G+    LA EVS   G+ +  + NN FG V D+   S+ +GN+ +N    K+  K  K 
Sbjct: 54   HGLRAHCLAHEVSGGEGEDERPL-NNGFGLVSDDT-LSFSQGNIKRNESSKKDAEKIIKV 111

Query: 521  VTPLVVXXXXXXXXXXXXXLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTL 700
             TPLVV             LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCT+
Sbjct: 112  ETPLVVPHGSSTGGGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTI 171

Query: 701  MSRMHHRREGYPFGSLVDFAPDPLGHPIFSFSPLAIHTRNLLADPKCTLVVQIPGWSGLS 880
            MSRMHHRREGYPFGSLVDFAPD +GHPIFSFSPLAIHTRNLLADP+CTLVVQIPGWSGLS
Sbjct: 172  MSRMHHRREGYPFGSLVDFAPDSVGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLS 231

Query: 881  NARVTLFGDVFPLSADEQEWAHRQYVAKHQQGASQQWGNFYYYRMHNISDIYFIGGFGTV 1060
            NARVT+FGDVFPL  D+QEWAH+QY+AKHQQG SQQWGNFYY+RM NISDIYFIGGFGTV
Sbjct: 232  NARVTIFGDVFPLPEDQQEWAHKQYIAKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTV 291

Query: 1061 AWVDVKEYETVQPDKIAVNGGEQNLKELNAKFSKRIKELLSTETEIDDAALISIDSKGVD 1240
            AWVDVKEYE +QPDKIAV+G E NLKELNA FSK +KELLSTETE+DDAALISIDSKG D
Sbjct: 292  AWVDVKEYEALQPDKIAVDGEEHNLKELNAIFSKPLKELLSTETEVDDAALISIDSKGTD 351

Query: 1241 IRVREGAQFNVQRISFD 1291
            IRVR+GAQFNVQR+SF+
Sbjct: 352  IRVRQGAQFNVQRLSFE 368


>ref|XP_002264902.1| PREDICTED: uncharacterized protein LOC100253108 isoform 1 [Vitis
            vinifera] gi|297735773|emb|CBI18460.3| unnamed protein
            product [Vitis vinifera]
          Length = 396

 Score =  465 bits (1196), Expect = e-128
 Identities = 249/375 (66%), Positives = 282/375 (75%), Gaps = 5/375 (1%)
 Frame = +2

Query: 182  MEALSSTIHLQSSQTTCFIKPNVKPTKGYLSFDSRRFSGWDLSVERLGALSTC--GGGVI 355
            MEALSS++ +     T  +     P+    S  S   S   +S +R G+L        + 
Sbjct: 1    MEALSSSVFVSKFSETRPVFHTPPPSSS--SSSSFSCSLVKISNKRSGSLKIVDTSPSLR 58

Query: 356  VRSLAREVSDD--GGDAKGGVENNEFGFVDDEGGSSWFEGNLSQNGGNKEVVKD-SKTVT 526
            +R+L+ +VS D  G DA G      FG   +E  SS  +GNL+ N   ++ V + SK   
Sbjct: 59   LRALSGDVSGDVEGEDASG------FGLASEESVSSLSQGNLNHNQSPEKGVDEMSKMEM 112

Query: 527  PLVVXXXXXXXXXXXXXLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTLMS 706
            PL V             LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCT+MS
Sbjct: 113  PLTVSHGSITGGGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMS 172

Query: 707  RMHHRREGYPFGSLVDFAPDPLGHPIFSFSPLAIHTRNLLADPKCTLVVQIPGWSGLSNA 886
            RMHHRREGYPFGSLVDFAPD +GHPIFSFSPLAIHTRNLLADP+CTLVVQIPGWSGLSNA
Sbjct: 173  RMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNA 232

Query: 887  RVTLFGDVFPLSADEQEWAHRQYVAKHQQGASQQWGNFYYYRMHNISDIYFIGGFGTVAW 1066
            RVT+FGDVFPL   +QEWAH+QY+AKH QG SQQWGNFYY+RM NISDIYFIGGFGTVAW
Sbjct: 233  RVTIFGDVFPLPEHQQEWAHKQYIAKHLQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAW 292

Query: 1067 VDVKEYETVQPDKIAVNGGEQNLKELNAKFSKRIKELLSTETEIDDAALISIDSKGVDIR 1246
            VDVKEYE +QPDKIAV+GGEQNLKELNA FSK +KELLS E EIDDAALISIDSKG DIR
Sbjct: 293  VDVKEYEALQPDKIAVDGGEQNLKELNAVFSKPLKELLSMEAEIDDAALISIDSKGTDIR 352

Query: 1247 VREGAQFNVQRISFD 1291
            VR+GAQFN+QRI F+
Sbjct: 353  VRQGAQFNIQRIPFE 367


>ref|XP_002315376.1| predicted protein [Populus trichocarpa] gi|222864416|gb|EEF01547.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  464 bits (1194), Expect = e-128
 Identities = 229/313 (73%), Positives = 261/313 (83%), Gaps = 1/313 (0%)
 Frame = +2

Query: 356  VRSLAREVSDDGGDAKGGVENNEFGFVDDEGGSSWFEGNLSQN-GGNKEVVKDSKTVTPL 532
            +++LAR+VS D  D +G   NN FGF  D+   S+ + N+ Q+    K+     K  TPL
Sbjct: 3    LQALARDVSGDADD-QGPFTNNGFGFFSDDI-LSFPQDNIEQSESSEKDAENILKVETPL 60

Query: 533  VVXXXXXXXXXXXXXLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTLMSRM 712
            +V             LFRTPISGGVQSATS HGLPRPALAVRNLMEQARFAHLCT+MSRM
Sbjct: 61   IVPHGSGIGGGTRAGLFRTPISGGVQSATSVHGLPRPALAVRNLMEQARFAHLCTVMSRM 120

Query: 713  HHRREGYPFGSLVDFAPDPLGHPIFSFSPLAIHTRNLLADPKCTLVVQIPGWSGLSNARV 892
            HHRREGYPFGSLVDFAPDP+GHPIFSFSPLAIHTRNLL DP+CTLVVQIPGWSGLSNARV
Sbjct: 121  HHRREGYPFGSLVDFAPDPMGHPIFSFSPLAIHTRNLLVDPRCTLVVQIPGWSGLSNARV 180

Query: 893  TLFGDVFPLSADEQEWAHRQYVAKHQQGASQQWGNFYYYRMHNISDIYFIGGFGTVAWVD 1072
            T+FGDVFPL   +QEWAH+QY+AKHQQG +QQWGNFYY+R+ NISDIYFIGGFGTVAWVD
Sbjct: 181  TIFGDVFPLPEHQQEWAHKQYIAKHQQGPTQQWGNFYYFRLQNISDIYFIGGFGTVAWVD 240

Query: 1073 VKEYETVQPDKIAVNGGEQNLKELNAKFSKRIKELLSTETEIDDAALISIDSKGVDIRVR 1252
            VKEYE +QPDKIAV+GGEQNLKELNA FSK +KELLS++TE+DDAA ISIDSKG DIRVR
Sbjct: 241  VKEYEALQPDKIAVDGGEQNLKELNAIFSKLLKELLSSDTEVDDAAFISIDSKGTDIRVR 300

Query: 1253 EGAQFNVQRISFD 1291
            +GAQFN+QR+SF+
Sbjct: 301  QGAQFNIQRLSFE 313


>ref|XP_002311906.1| predicted protein [Populus trichocarpa] gi|222851726|gb|EEE89273.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  458 bits (1179), Expect = e-126
 Identities = 231/331 (69%), Positives = 259/331 (78%), Gaps = 21/331 (6%)
 Frame = +2

Query: 362  SLAREVSDDGGDAKGGVENNEFGFVDD--------------------EGGSSWFEGNLSQ 481
            +LAR VS   GD +G + N    F D+                    +G S   + N++Q
Sbjct: 56   ALARHVSGGDGDDQGPLTNGSAFFSDETLSLPQTITGFIKWLLRLSSDGLSHVMKDNINQ 115

Query: 482  N-GGNKEVVKDSKTVTPLVVXXXXXXXXXXXXXLFRTPISGGVQSATSAHGLPRPALAVR 658
            +    K+  K  K  TPL+V             LFRTPISGGVQSATSAHGLPRPALAVR
Sbjct: 116  SESSEKDAEKILKVETPLIVPHGNGTGGGARAGLFRTPISGGVQSATSAHGLPRPALAVR 175

Query: 659  NLMEQARFAHLCTLMSRMHHRREGYPFGSLVDFAPDPLGHPIFSFSPLAIHTRNLLADPK 838
            NLMEQARFAHLCT+MSRMHHRREGYPFGSLVDFAPD +GHPIFSFSPLAIHTRNLL DP+
Sbjct: 176  NLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLVDPR 235

Query: 839  CTLVVQIPGWSGLSNARVTLFGDVFPLSADEQEWAHRQYVAKHQQGASQQWGNFYYYRMH 1018
            CTLVVQIPGWSGLSNARVT+FGDVFPL   +QEWAH+QY+AKHQQG SQQWGNFYY+RM 
Sbjct: 236  CTLVVQIPGWSGLSNARVTIFGDVFPLPEHQQEWAHKQYIAKHQQGPSQQWGNFYYFRMQ 295

Query: 1019 NISDIYFIGGFGTVAWVDVKEYETVQPDKIAVNGGEQNLKELNAKFSKRIKELLSTETEI 1198
            NISDIYFIGGFGTVAWVDVKEYE +QPDKIAV+GGEQNLKELNA FSK +KELLS+ETE+
Sbjct: 296  NISDIYFIGGFGTVAWVDVKEYEALQPDKIAVDGGEQNLKELNAIFSKPLKELLSSETEV 355

Query: 1199 DDAALISIDSKGVDIRVREGAQFNVQRISFD 1291
            DDAA ISIDSKG DIRVR+GAQFN+QR+SF+
Sbjct: 356  DDAAFISIDSKGTDIRVRQGAQFNIQRLSFE 386


>ref|XP_002264942.1| PREDICTED: uncharacterized protein LOC100253108 isoform 2 [Vitis
            vinifera]
          Length = 389

 Score =  456 bits (1173), Expect = e-126
 Identities = 249/374 (66%), Positives = 279/374 (74%), Gaps = 4/374 (1%)
 Frame = +2

Query: 182  MEALSSTIHLQSSQTTCFIKPNVKPTKGYLSFDSRRFSGWDLSVERLGALSTC--GGGVI 355
            MEALSS++ +     T  +     P+    S  S   S   +S +R G+L        + 
Sbjct: 1    MEALSSSVFVSKFSETRPVFHTPPPSSS--SSSSFSCSLVKISNKRSGSLKIVDTSPSLR 58

Query: 356  VRSLAREVSDD--GGDAKGGVENNEFGFVDDEGGSSWFEGNLSQNGGNKEVVKDSKTVTP 529
            +R+L+ +VS D  G DA G      FG   +E  SS     LSQ+   K V + SK   P
Sbjct: 59   LRALSGDVSGDVEGEDASG------FGLASEESVSS-----LSQSP-EKGVDEMSKMEMP 106

Query: 530  LVVXXXXXXXXXXXXXLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTLMSR 709
            L V             LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCT+MSR
Sbjct: 107  LTVSHGSITGGGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSR 166

Query: 710  MHHRREGYPFGSLVDFAPDPLGHPIFSFSPLAIHTRNLLADPKCTLVVQIPGWSGLSNAR 889
            MHHRREGYPFGSLVDFAPD +GHPIFSFSPLAIHTRNLLADP+CTLVVQIPGWSGLSNAR
Sbjct: 167  MHHRREGYPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNAR 226

Query: 890  VTLFGDVFPLSADEQEWAHRQYVAKHQQGASQQWGNFYYYRMHNISDIYFIGGFGTVAWV 1069
            VT+FGDVFPL   +QEWAH+QY+AKH QG SQQWGNFYY+RM NISDIYFIGGFGTVAWV
Sbjct: 227  VTIFGDVFPLPEHQQEWAHKQYIAKHLQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWV 286

Query: 1070 DVKEYETVQPDKIAVNGGEQNLKELNAKFSKRIKELLSTETEIDDAALISIDSKGVDIRV 1249
            DVKEYE +QPDKIAV+GGEQNLKELNA FSK +KELLS E EIDDAALISIDSKG DIRV
Sbjct: 287  DVKEYEALQPDKIAVDGGEQNLKELNAVFSKPLKELLSMEAEIDDAALISIDSKGTDIRV 346

Query: 1250 REGAQFNVQRISFD 1291
            R+GAQFN+QRI F+
Sbjct: 347  RQGAQFNIQRIPFE 360


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