BLASTX nr result

ID: Coptis21_contig00004475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004475
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523102.1| conserved hypothetical protein [Ricinus comm...   130   2e-28
ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263...   129   3e-28
gb|ABK94827.1| unknown [Populus trichocarpa]                          128   7e-28
ref|NP_001237332.1| uncharacterized protein LOC100500136 precurs...   127   1e-27
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   127   1e-27

>ref|XP_002523102.1| conserved hypothetical protein [Ricinus communis]
           gi|223537664|gb|EEF39287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  130 bits (327), Expect = 2e-28
 Identities = 68/127 (53%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = +2

Query: 143 TPSSATVLSAYDVLGSYGFPEGLLPQGITGYEIDQS-GKFTAYLKGSCNVHIAG-HHLKY 316
           T ++    +AY+VL  Y FP G+LP+G+TGYE+D++ GKF AYL GSC+  + G + LKY
Sbjct: 19  TAAAGDTPTAYEVLAGYNFPVGILPKGVTGYELDRTTGKFRAYLNGSCSFSLQGSYQLKY 78

Query: 317 KSTITGNISNDKLTDLEGVSVKVLLFWIGIDKVTVTGNDLHFKVGIYNADYSTDTFSWSP 496
           KSTI+G IS+ KLT+L GVSVKVL  W+ I +V    NDL F VGI +A +S D F   P
Sbjct: 79  KSTISGYISDRKLTNLSGVSVKVLFLWLNIVEVVRAENDLQFSVGIASASFSLDNFYVCP 138

Query: 497 TCG*CGL 517
            CG CGL
Sbjct: 139 QCG-CGL 144


>ref|XP_002283241.1| PREDICTED: uncharacterized protein LOC100263080 [Vitis vinifera]
           gi|296089728|emb|CBI39547.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  129 bits (325), Expect = 3e-28
 Identities = 71/150 (47%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
 Frame = +2

Query: 80  TTMSPRLRFRFSSLCITLLPTTPSSATVLS--AYDVLGSYGFPEGLLPQGITGYEIDQS- 250
           +T + RL    ++LC+ L+ +TP+S++  S   Y+VL  Y FP GLLP+G+ GY+++ S 
Sbjct: 3   STKTQRLISLAATLCLILIHSTPASSSNDSPTVYEVLQDYNFPVGLLPKGVIGYDLNTST 62

Query: 251 GKFTAYLKGSCNVHIAG-HHLKYKSTITGNISNDKLTDLEGVSVKVLLFWIGIDKVTVTG 427
           GKF+A   GSC+  + G + LKYKSTI GNIS  KL+ LEGVSVK+   W+ I +V  +G
Sbjct: 63  GKFSASFNGSCSFSLEGSYQLKYKSTIKGNISKGKLSSLEGVSVKLFFIWVDIIEVRRSG 122

Query: 428 NDLHFKVGIYNADYSTDTFSWSPTCG*CGL 517
           +D+ F VGI +A +S D F   P CG CGL
Sbjct: 123 DDIDFSVGIASAGFSIDNFEECPQCG-CGL 151


>gb|ABK94827.1| unknown [Populus trichocarpa]
          Length = 175

 Score =  128 bits (322), Expect = 7e-28
 Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 13/149 (8%)
 Frame = +2

Query: 110 FSSLCITLL--PTTPSSATVL---------SAYDVLGSYGFPEGLLPQGITGYEIDQS-G 253
           F++LC+ L+   + PSS+ +          +AYD+LG Y  P+GLLP+G+ GY +D + G
Sbjct: 7   FTALCLILMLSQSLPSSSLLQETNFLDQNPTAYDILGDYNLPKGLLPKGVVGYSLDTTAG 66

Query: 254 KFTAYLKGSCNVHIAG-HHLKYKSTITGNISNDKLTDLEGVSVKVLLFWIGIDKVTVTGN 430
           KF+A+  G+C+  + G + L+YKSTI G IS  +L+ LEGVSVK+  FW+ I  VT  G+
Sbjct: 67  KFSAFWNGTCSFSLEGSYQLRYKSTINGYISKGRLSRLEGVSVKLFFFWVDIIDVTRNGD 126

Query: 431 DLHFKVGIYNADYSTDTFSWSPTCG*CGL 517
           DL F VGI  AD+S D F   P CG CGL
Sbjct: 127 DLEFSVGIAGADFSVDNFEECPQCG-CGL 154


>ref|NP_001237332.1| uncharacterized protein LOC100500136 precursor [Glycine max]
           gi|255629426|gb|ACU15059.1| unknown [Glycine max]
          Length = 152

 Score =  127 bits (320), Expect = 1e-27
 Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +2

Query: 107 RFSSLCITLLPTTPSSATVLSAYDVLGSYGFPEGLLPQGITGYEIDQ-SGKFTAYLKGSC 283
           R S + + +L      A  LSAYDVL  Y  P GLLP+G TGYE+++ +G FTAYL G+C
Sbjct: 2   RSSIIFLCILVYLNVVAAELSAYDVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTC 61

Query: 284 NVHIAGHHLKYKSTITGNISNDKLTDLEGVSVKVLLFWIGIDKVTVTGNDLHFKVGIYNA 463
              I  + LKYKSTI G IS  KL+ L+GVSVK+ + W+ I ++T  G+DL F VG+ +A
Sbjct: 62  YFSIESYELKYKSTIKGVISKGKLSKLKGVSVKIEVLWLKIVELTRDGDDLQFSVGVASA 121

Query: 464 DYSTDTFSWSPTCG*CG 514
            +S D+FS SP CG CG
Sbjct: 122 GFSVDSFSESPQCG-CG 137


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  127 bits (320), Expect = 1e-27
 Identities = 70/159 (44%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
 Frame = +2

Query: 59  LVYSGNSTTMSPRLRFRFSSLCITLLPTTPSSATVLS----AYDVLGSYGFPEGLLPQGI 226
           L+Y+ + +++S       + LCI LL ++   A  ++    AY++L  Y FP+GLLP+G+
Sbjct: 3   LIYTNSYSSLS-------AILCIVLLFSSSWLAKSVNEEPTAYEILSDYNFPKGLLPKGV 55

Query: 227 TGYEIDQ-SGKFTAYLKGSCNVHIAG-HHLKYKSTITGNISNDKLTDLEGVSVKVLLFWI 400
            GY++D  SGKF+A+L G+C+  + G + L+YKSTI G+IS  KL+ L+GVSVK+L  W+
Sbjct: 56  IGYDLDTTSGKFSAFLNGTCSFSLEGSYQLRYKSTIRGHISKGKLSSLQGVSVKLLFMWV 115

Query: 401 GIDKVTVTGNDLHFKVGIYNADYSTDTFSWSPTCG*CGL 517
            I +V+ +G+DL F VGI  A +  D F  SP CG CGL
Sbjct: 116 DIVEVSRSGDDLEFSVGIAGAGFPIDNFEESPQCG-CGL 153


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