BLASTX nr result
ID: Coptis21_contig00004474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004474
(1569 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258... 89 4e-34
emb|CBI15097.3| unnamed protein product [Vitis vinifera] 89 4e-34
ref|XP_004152454.1| PREDICTED: uncharacterized protein LOC101218... 86 2e-33
ref|XP_002511470.1| Arginine/serine-rich coiled coil protein, pu... 83 2e-30
ref|XP_002875879.1| predicted protein [Arabidopsis lyrata subsp.... 73 2e-27
>ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258813 [Vitis vinifera]
Length = 332
Score = 89.4 bits (220), Expect(3) = 4e-34
Identities = 45/68 (66%), Positives = 49/68 (72%)
Frame = +3
Query: 621 PAERVKAKMKLQLSQTADKDPDKGMGAGWERFEFNKDAPLXXXXXXXXXXXXXXXKKMSQ 800
PAERVKAKMKLQLS+TA+KD KGMG+GWERFEFNKDAPL K + Q
Sbjct: 196 PAERVKAKMKLQLSETAEKDATKGMGSGWERFEFNKDAPLDDEEIEAAEDDAMLVKHVGQ 255
Query: 801 SFRFSAVE 824
SFRFSAVE
Sbjct: 256 SFRFSAVE 263
Score = 80.9 bits (198), Expect(3) = 4e-34
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +1
Query: 847 RREEQIKAAHDEAMFGAPVAQPSMSTDEEAAIDDRTDNAIDQKATKENGVGTNHISDKVL 1026
RREEQIKAAHDEA+FG PS +D E +++ D K + E+ +GT+ IS+KVL
Sbjct: 265 RREEQIKAAHDEAIFGGSTIPPSNFSDNEPEVEN------DTKESNESSLGTSLISEKVL 318
Query: 1027 AKQQGSWRDRARKL 1068
AKQQGSWRDRAR++
Sbjct: 319 AKQQGSWRDRARRV 332
Score = 23.1 bits (48), Expect(3) = 4e-34
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 502 GTSSKKKVDYSRLIKGYQDM 561
G VDY+RLI GY M
Sbjct: 175 GKEKNGGVDYARLIDGYDKM 194
>emb|CBI15097.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 89.4 bits (220), Expect(3) = 4e-34
Identities = 45/68 (66%), Positives = 49/68 (72%)
Frame = +3
Query: 621 PAERVKAKMKLQLSQTADKDPDKGMGAGWERFEFNKDAPLXXXXXXXXXXXXXXXKKMSQ 800
PAERVKAKMKLQLS+TA+KD KGMG+GWERFEFNKDAPL K + Q
Sbjct: 138 PAERVKAKMKLQLSETAEKDATKGMGSGWERFEFNKDAPLDDEEIEAAEDDAMLVKHVGQ 197
Query: 801 SFRFSAVE 824
SFRFSAVE
Sbjct: 198 SFRFSAVE 205
Score = 80.9 bits (198), Expect(3) = 4e-34
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +1
Query: 847 RREEQIKAAHDEAMFGAPVAQPSMSTDEEAAIDDRTDNAIDQKATKENGVGTNHISDKVL 1026
RREEQIKAAHDEA+FG PS +D E +++ D K + E+ +GT+ IS+KVL
Sbjct: 207 RREEQIKAAHDEAIFGGSTIPPSNFSDNEPEVEN------DTKESNESSLGTSLISEKVL 260
Query: 1027 AKQQGSWRDRARKL 1068
AKQQGSWRDRAR++
Sbjct: 261 AKQQGSWRDRARRV 274
Score = 23.1 bits (48), Expect(3) = 4e-34
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 502 GTSSKKKVDYSRLIKGYQDM 561
G VDY+RLI GY M
Sbjct: 117 GKEKNGGVDYARLIDGYDKM 136
>ref|XP_004152454.1| PREDICTED: uncharacterized protein LOC101218261 [Cucumis sativus]
gi|449487790|ref|XP_004157802.1| PREDICTED:
uncharacterized LOC101218261 [Cucumis sativus]
Length = 366
Score = 85.9 bits (211), Expect(3) = 2e-33
Identities = 42/74 (56%), Positives = 56/74 (75%)
Frame = +1
Query: 844 ARREEQIKAAHDEAMFGAPVAQPSMSTDEEAAIDDRTDNAIDQKATKENGVGTNHISDKV 1023
AR+EEQIKAAHDEAMFGAPV Q +TD+E ++ + K + ++G+ TN +S+K+
Sbjct: 295 ARKEEQIKAAHDEAMFGAPVRQLLSTTDDEDKVEAENERV---KESCDSGMATNLLSEKI 351
Query: 1024 LAKQQGSWRDRARK 1065
+AKQQGSWRDRARK
Sbjct: 352 IAKQQGSWRDRARK 365
Score = 79.7 bits (195), Expect(3) = 2e-33
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3
Query: 618 APAERVKAKMKLQLSQTADKDPDKGMGAGWERFEFNKDAPLXXXXXXXXXXXXXXXKKMS 797
+PAERVKAKMKLQL++TA D KG G GWERFEF+KDAPL K +
Sbjct: 226 SPAERVKAKMKLQLAETARMDDTKGTGPGWERFEFDKDAPLDDEEIEAAEDDATLVKHIG 285
Query: 798 QSFRFSAVEVLSDK 839
QSFRFSA+E ++
Sbjct: 286 QSFRFSAIEARKEE 299
Score = 25.8 bits (55), Expect(3) = 2e-33
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 481 VEKSSNEGTSSKKKVDYSRLIKGYQDM 561
VE+ EG VDYSRLI+GY M
Sbjct: 205 VERQKTEG------VDYSRLIEGYDMM 225
>ref|XP_002511470.1| Arginine/serine-rich coiled coil protein, putative [Ricinus
communis] gi|223550585|gb|EEF52072.1|
Arginine/serine-rich coiled coil protein, putative
[Ricinus communis]
Length = 324
Score = 82.8 bits (203), Expect(3) = 2e-30
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +3
Query: 624 AERVKAKMKLQLSQTADKDPDKGMGAGWERFEFNKDAPLXXXXXXXXXXXXXXXKKMSQS 803
AE+VKA+MK QL++TA+KDP KGMG+GWERFEF+KDAPL K + QS
Sbjct: 187 AEKVKARMKFQLNETAEKDPTKGMGSGWERFEFDKDAPLDNEEIEAAEDDAALVKHIGQS 246
Query: 804 FRFSAVE 824
FRFSAVE
Sbjct: 247 FRFSAVE 253
Score = 73.6 bits (179), Expect(3) = 2e-30
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +1
Query: 844 ARREEQIKAAHDEAMFGAPVAQPSMSTDEEAAIDDRTDNAIDQKATKENGVGTNHISDKV 1023
AR+ EQIK AHDEAMFG P + SM +D E + + ++K + + V +S+KV
Sbjct: 254 ARKNEQIKVAHDEAMFGVPAIRGSMVSDNEPEVVN------NEKESTKTDVAAGLLSEKV 307
Query: 1024 LAKQQGSWRDRARK 1065
LAKQQGSWRDRARK
Sbjct: 308 LAKQQGSWRDRARK 321
Score = 24.3 bits (51), Expect(3) = 2e-30
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 523 VDYSRLIKGYQDM 561
VDYS+LI GY++M
Sbjct: 172 VDYSKLIHGYENM 184
>ref|XP_002875879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321717|gb|EFH52138.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 320
Score = 73.2 bits (178), Expect(3) = 2e-27
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +1
Query: 844 ARREEQIKAAHDEAMFGAPVAQ-PSMSTDEEAAIDDRTDNA-IDQKATKENGVGTNHISD 1017
A+REEQ+KAAHDEAMFGAP Q P+ +TD D+ TD + + N + +S+
Sbjct: 249 AKREEQLKAAHDEAMFGAPAGQTPTNNTD-----DNVTDTTYVKDDEGESNSGAISLLSE 303
Query: 1018 KVLAKQQGSWRDRARK 1065
KV+AKQQGSWRDRARK
Sbjct: 304 KVIAKQQGSWRDRARK 319
Score = 69.3 bits (168), Expect(3) = 2e-27
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +3
Query: 624 AERVKAKMKLQLSQTADKDPDKGMGAGWERFEFNKDAPL-XXXXXXXXXXXXXXXKKMSQ 800
AE+VKAKMKLQL +TA++D KG AGWERFEF+KDAP+ K+M Q
Sbjct: 183 AEKVKAKMKLQLDETAEQDTSKG--AGWERFEFDKDAPVDDEEVEEGTDDDAALVKRMGQ 240
Query: 801 SFRFSAVE 824
SFRFSA+E
Sbjct: 241 SFRFSAIE 248
Score = 28.1 bits (61), Expect(3) = 2e-27
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 514 KKKVDYSRLIKGYQDM 561
+KK+DYSRLI GY ++
Sbjct: 165 EKKIDYSRLINGYDEL 180