BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004471
         (1654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   538   e-150
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   530   e-148
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   494   e-137
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   487   e-135
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   481   e-133

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  538 bits (1385), Expect = e-150
 Identities = 283/451 (62%), Positives = 341/451 (75%), Gaps = 11/451 (2%)
 Frame = +1

Query: 94   MEQRLANTWRMTVNEKKFIETALLADLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 273
            MEQRLA+T+RMTVNEKKFIE ALL+DLR+DGR+P+D+RR++IKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 274  MGFVTSQLVQPYRERPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 453
            MGFVT QL+QPYR+RPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+IDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 454  VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 633
            VD ESLCVLAGKLVWSIR+DLH+ID                 +TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 634  TVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGSMTATLNMNGEIC 813
             VHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGG MTATLN NG++C
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 814  AIQKAGGEGVMQSMIMQCLRIASVKAADVTSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 993
            AIQKAGGEG++QS+IMQCLRIASVKAAD+TSKIK+AVE ++TERA RKIKRH        
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDV 300

Query: 994  XXXXIRMKQ-QNQSTSHKVVGELSKLQMD----EPEGSCSSKGDGIDSQTKSTAKTSKGR 1158
                 +M++ +NQS   KVV ELS   M+    E E SC ++   ++ +T+ + +    R
Sbjct: 301  SGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQLSEQGRTNR 360

Query: 1159 SD-SVKKLGGAPSSWDPYPSCIDYDSLKTSVASPERI--TPKREDDQGPM---EVTLEEP 1320
            SD + +   G PSSWDPY   ID D LK S+AS   I    K++D +G M   +V  EEP
Sbjct: 361  SDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMKAPDVKSEEP 420

Query: 1321 VIDLHTTKSTPVAAEDSGQQTSIATTLQDAV 1413
              D+      P+    +  QT+   TL+DAV
Sbjct: 421  NADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 450


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  530 bits (1365), Expect = e-148
 Identities = 283/460 (61%), Positives = 341/460 (74%), Gaps = 20/460 (4%)
 Frame = +1

Query: 94   MEQRLANTWRMTVNEKKFIETALLADLRVDGRKPYDYRRLTIKFGK---------EDGSS 246
            MEQRLA+T+RMTVNEKKFIE ALL+DLR+DGR+P+D+RR++IKFG+         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 247  EVQLGQTHVMGFVTSQLVQPYRERPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARII 426
            EVQLGQTHVMGFVT QL+QPYR+RPNEGTLSIYTEFSPMADPSFEAGRPGE+AVEL R+I
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 427  DRGLRESRAVDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECT 606
            DRGLRESRAVD ESLCVLAGKLVWSIR+DLH+ID                 +TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 607  LGGEDGQEVTVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGSMTA 786
             GGEDGQE+ VHPPEV+EPLPLI+HHLPIAVTFA +G+ NIMVIDP+HSEEAVMGG MTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 787  TLNMNGEICAIQKAGGEGVMQSMIMQCLRIASVKAADVTSKIKDAVEVYSTERAQRKIKR 966
            TLN NG++CAIQKAGGEG++QS+IMQCLRIASVKAAD+TSKIK+AVE ++TERA RKIKR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 967  HXXXXXXXXXXXXIRMKQ-QNQSTSHKVVGELSKLQMD----EPEGSCSSKGDGIDSQTK 1131
            H             +M++ +NQS   KVV ELS   M+    E E SC ++   ++ +T+
Sbjct: 301  HSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQ 360

Query: 1132 STAKTSKGRSD-SVKKLGGAPSSWDPYPSCIDYDSLKTSVASPERI--TPKREDDQGPM- 1299
             + +    RSD + +   G PSSWDPY   ID D LK S+AS   I    K++D +G M 
Sbjct: 361  LSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMK 420

Query: 1300 --EVTLEEPVIDLHTTKSTPVAAEDSGQQTSIATTLQDAV 1413
              +V  EEP  D+      P+    +  QT+   TL+DAV
Sbjct: 421  APDVKSEEPNADIDPA-LCPMKTVGTTPQTNGEKTLKDAV 459


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
            gi|223529292|gb|EEF31262.1| exosome complex exonuclease
            rrp45, putative [Ricinus communis]
          Length = 463

 Score =  494 bits (1271), Expect = e-137
 Identities = 266/448 (59%), Positives = 319/448 (71%), Gaps = 8/448 (1%)
 Frame = +1

Query: 94   MEQRLANTWRMTVNEKKFIETALLADLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 273
            ME R+A+TWRM+VNEKKFIE+AL +DLR+DGR  +++R+LTIKFG+EDGSSEVQLGQTHV
Sbjct: 1    MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 274  MGFVTSQLVQPYRERPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 453
            MGFVTSQLVQPYR+RPNEG+LSI++EFSPMADPSFE GRPGESAVEL RIIDRGLRESRA
Sbjct: 61   MGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 454  VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 633
            VDTESLCVLAGKLVW+IR+DLH++D                 +TFRRPECTLGGEDGQ+V
Sbjct: 121  VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQQV 180

Query: 634  TVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGSMTATLNMNGEIC 813
             VHPPEVKEPLPLI+HHLPIAVTFAF    + MV+DP+H+EEAVM G MT T+N NG+IC
Sbjct: 181  IVHPPEVKEPLPLIVHHLPIAVTFAFFSSEHTMVVDPTHNEEAVMTGRMTVTVNANGDIC 240

Query: 814  AIQKAGGEGVMQSMIMQCLRIASVKAADVTSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 993
            +IQKAGGEGVMQS IM CLR+AS  A  +T KIKDAVE Y+TERA RKIKRH        
Sbjct: 241  SIQKAGGEGVMQSRIMHCLRVASRNAESITKKIKDAVEAYNTERALRKIKRHSTSVAVNV 300

Query: 994  XXXXIRMKQQNQSTSHKVVGELSKLQMDE----PEGSCSSKGDGIDSQTKSTAK--TSKG 1155
                   + +N+    K + E+S+ QM+      E S  S+ +GIDS  +S+ +  TS  
Sbjct: 301  STAIDVRELENKPFIQKGISEISRHQMERLKLTSEESSVSQSNGIDSGLRSSEQGGTSNR 360

Query: 1156 RSDSVKKLGGAPSSWDPYPSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLH 1335
              ++   LGG PS WDPY   +D D LK S+AS     P +E   G  + T         
Sbjct: 361  EGNATNFLGG-PSRWDPYSKGVDSDFLKASLASHGVSAPNKEKG-GEQKSTQAVDEKAPE 418

Query: 1336 TTKSTPVAAE--DSGQQTSIATTLQDAV 1413
            T K      E  ++G QTS   TL+DAV
Sbjct: 419  TAKPATSVGETFETGIQTSGEKTLKDAV 446


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  487 bits (1253), Expect = e-135
 Identities = 262/449 (58%), Positives = 311/449 (69%), Gaps = 9/449 (2%)
 Frame = +1

Query: 94   MEQRLANTWRMTVNEKKFIETALLADLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 273
            MEQRLANTWR++ NEKKFIETALL+DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 274  MGFVTSQLVQPYRERPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 453
            MGFVT+QLVQPYR+RPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 454  VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 633
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 634  TVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGSMTATLNMNGEIC 813
             VHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGG MT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 814  AIQKAGGEGVMQSMIMQCLRIASVKAADVTSKIKDAVEVYSTERAQRKIKRHXXXXXXXX 993
            AIQKAGGEGV++S+IMQCLRIASVKA D+T+KIK+AVE YS+ R  RKIKRH        
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 994  XXXXIRMKQQNQSTSHKVVGELSKLQMDEPEGSCSSKGDGIDSQTKSTAKTSKG----RS 1161
                     Q  S   K         +++ E   S  G       K+ A T++G    R 
Sbjct: 301  GGTGSLKDSQGISDGQK--------SINDQESVVSQSG-----SIKNDASTNQGQLDKRD 347

Query: 1162 DSVKKLGGAPSSWDPYPSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLHTT 1341
               K   G PS WDP+    D D LK ++AS   +T  +++D    E+   E ++D    
Sbjct: 348  SDAKNFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQEA 406

Query: 1342 K-----STPVAAEDSGQQTSIATTLQDAV 1413
            K      +PVAA+   ++     TL+DAV
Sbjct: 407  KVDEVNLSPVAAKTLSEENG-KKTLKDAV 434


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  481 bits (1237), Expect = e-133
 Identities = 262/451 (58%), Positives = 311/451 (68%), Gaps = 11/451 (2%)
 Frame = +1

Query: 94   MEQRLANTWRMTVNEKKFIETALLADLRVDGRKPYDYRRLTIKFGKEDGSSEVQLGQTHV 273
            MEQRLANTWR++ NEKKFIETALL+DLRVDGR P+DYR LTI FGK+DGSSEVQLGQTHV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 274  MGFVTSQLVQPYRERPNEGTLSIYTEFSPMADPSFEAGRPGESAVELARIIDRGLRESRA 453
            MGFVT+QLVQPYR+RPNEGTLSIYTEFSPMADPSFE GRPGESAVEL R+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 454  VDTESLCVLAGKLVWSIRVDLHVIDXXXXXXXXXXXXXXXXXMTFRRPECTLGGEDGQEV 633
            VDTESLCV++GK VW+IRVDLH++D                  TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 634  TVHPPEVKEPLPLIIHHLPIAVTFAFLGDGNIMVIDPSHSEEAVMGGSMTATLNMNGEIC 813
             VHPPEV+EPLPLIIHHLPIAVTFAF    +I+VIDP+H EEAVMGG MT TLN N ++C
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 814  AIQKAGGEGVMQSMIMQCLRIASVKAADVTSKIK--DAVEVYSTERAQRKIKRHXXXXXX 987
            AIQKAGGEGV++S+IMQCLRIASVKA D+T+KIK   AVE YS+ R  RKIKRH      
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHPSVNLD 300

Query: 988  XXXXXXIRMKQQNQSTSHKVVGELSKLQMDEPEGSCSSKGDGIDSQTKSTAKTSKGRSD- 1164
                       Q  S   K         +++ E   S  G       K+ A T++G+ D 
Sbjct: 301  VGGGTGSLKDSQGISDGQK--------SINDQESVVSQSG-----SIKNDASTNQGQLDK 347

Query: 1165 ---SVKKLGGAPSSWDPYPSCIDYDSLKTSVASPERITPKREDDQGPMEVTLEEPVIDLH 1335
                 K   G PS WDP+    D D LK ++AS   +T  +++D    E+   E ++D  
Sbjct: 348  RDVDAKNFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSD-EMMSSESMVDEQ 406

Query: 1336 TTK-----STPVAAEDSGQQTSIATTLQDAV 1413
              K      +PVAA+   ++     TL+DAV
Sbjct: 407  EAKVDEVNLSPVAAKTLSEENG-KKTLKDAV 436