BLASTX nr result
ID: Coptis21_contig00004458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004458
(2523 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16359.3| unnamed protein product [Vitis vinifera] 155 5e-35
ref|XP_002282734.1| PREDICTED: uncharacterized protein LOC100260... 155 5e-35
ref|NP_001174723.1| Os06g0286351 [Oryza sativa Japonica Group] g... 79 5e-12
ref|XP_003603302.1| Sister chromatid cohesion protein PDS5-like ... 76 4e-11
gb|EEE65539.1| hypothetical protein OsJ_21006 [Oryza sativa Japo... 73 3e-10
>emb|CBI16359.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 155 bits (392), Expect = 5e-35
Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 13/197 (6%)
Frame = -2
Query: 2078 LPSEEKVEKPPQKRKRGADGEIVEAFLLSPKKDFSKLRPRTLVPSFRKIDLNESDFQRIV 1899
+PSEE K P KRKRGADGEIV+AFL S ++ S+LRPR VP+FRK++L E+D +RIV
Sbjct: 82 IPSEENF-KTPMKRKRGADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIV 140
Query: 1898 GKRVKVYWPQPRRWYAGHIESFDKEKKLHSIFYDDGEKEILDLRKERFELEVMSHEGFHL 1719
GKRVK+YW RRW+ G +++FD +K+ H+I Y+DGEKE LDLR+ERFELEV +GF+L
Sbjct: 141 GKRVKIYWSGSRRWFVGRVKAFDHDKRCHTIHYEDGEKEDLDLRQERFELEVFPGDGFNL 200
Query: 1718 XXXXXXXXXXXXXXXXXKDMKKSSSLNLGGVEGK------NNATINKTQVS-------RA 1578
+K+ + + GK NA K+ V RA
Sbjct: 201 IVEPKSEKKVKAWDGVKDSAEKNKESSKKAMSGKKVKVKVGNAKPMKSPVKSKKKRTVRA 260
Query: 1577 AKVDLRPENREGQTRSD 1527
K+++ NR+ +T+ +
Sbjct: 261 TKMNMSLLNRKEETKEE 277
Score = 106 bits (264), Expect = 3e-20
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Frame = -2
Query: 1484 ADTERAEAFLLSSEKCLSKLRPRKLVPSFQKVDLNESDFERIVGKRVKVYWPVPRRWYAG 1305
AD E +AFL S+E+ S+LRPRK VP+F+KV+L E+D ERIVGKRVK+YW RRW+ G
Sbjct: 98 ADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIVGKRVKIYWSGSRRWFVG 157
Query: 1304 CIKSFDMKKKLHRVCYDDXXXXXXXXXXXXXXXEVMSHEGFHXXXXXXXXXXXXXXXSDG 1125
+K+FD K+ H + Y+D EV +GF+ DG
Sbjct: 158 RVKAFDHDKRCHTIHYEDGEKEDLDLRQERFELEVFPGDGFN--LIVEPKSEKKVKAWDG 215
Query: 1124 GVVSEEMKKNG----------PLNVGDVK-AKNNALINENQVSRAAKKGGFQLHGGDITE 978
S E K + VG+ K K+ + + RA K L+ + T+
Sbjct: 216 VKDSAEKNKESSKKAMSGKKVKVKVGNAKPMKSPVKSKKKRTVRATKMNMSLLNRKEETK 275
Query: 977 EKTEDIAINIEVDVRPENIKDQKTGDVVVHVDESKSVNFGDGLGGSDPVKDYAELNIKVA 798
E+ ++ ++EVDV + +K ++ ++S VN+ + PVK+ + + +++
Sbjct: 276 EEA-NLTESVEVDVEHDEVKTDTLHSEII-TEKSAEVNYLENDKADSPVKNASGKHGEIS 333
Query: 797 LKTSKRASKLRAEKSSKDE 741
+ +K KS D+
Sbjct: 334 AQATKPNFNSEKGKSCLDD 352
>ref|XP_002282734.1| PREDICTED: uncharacterized protein LOC100260425 [Vitis vinifera]
Length = 494
Score = 155 bits (392), Expect = 5e-35
Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 13/197 (6%)
Frame = -2
Query: 2078 LPSEEKVEKPPQKRKRGADGEIVEAFLLSPKKDFSKLRPRTLVPSFRKIDLNESDFQRIV 1899
+PSEE K P KRKRGADGEIV+AFL S ++ S+LRPR VP+FRK++L E+D +RIV
Sbjct: 84 IPSEENF-KTPMKRKRGADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIV 142
Query: 1898 GKRVKVYWPQPRRWYAGHIESFDKEKKLHSIFYDDGEKEILDLRKERFELEVMSHEGFHL 1719
GKRVK+YW RRW+ G +++FD +K+ H+I Y+DGEKE LDLR+ERFELEV +GF+L
Sbjct: 143 GKRVKIYWSGSRRWFVGRVKAFDHDKRCHTIHYEDGEKEDLDLRQERFELEVFPGDGFNL 202
Query: 1718 XXXXXXXXXXXXXXXXXKDMKKSSSLNLGGVEGK------NNATINKTQVS-------RA 1578
+K+ + + GK NA K+ V RA
Sbjct: 203 IVEPKSEKKVKAWDGVKDSAEKNKESSKKAMSGKKVKVKVGNAKPMKSPVKSKKKRTVRA 262
Query: 1577 AKVDLRPENREGQTRSD 1527
K+++ NR+ +T+ +
Sbjct: 263 TKMNMSLLNRKEETKEE 279
Score = 106 bits (264), Expect = 3e-20
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Frame = -2
Query: 1484 ADTERAEAFLLSSEKCLSKLRPRKLVPSFQKVDLNESDFERIVGKRVKVYWPVPRRWYAG 1305
AD E +AFL S+E+ S+LRPRK VP+F+KV+L E+D ERIVGKRVK+YW RRW+ G
Sbjct: 100 ADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIVGKRVKIYWSGSRRWFVG 159
Query: 1304 CIKSFDMKKKLHRVCYDDXXXXXXXXXXXXXXXEVMSHEGFHXXXXXXXXXXXXXXXSDG 1125
+K+FD K+ H + Y+D EV +GF+ DG
Sbjct: 160 RVKAFDHDKRCHTIHYEDGEKEDLDLRQERFELEVFPGDGFN--LIVEPKSEKKVKAWDG 217
Query: 1124 GVVSEEMKKNG----------PLNVGDVK-AKNNALINENQVSRAAKKGGFQLHGGDITE 978
S E K + VG+ K K+ + + RA K L+ + T+
Sbjct: 218 VKDSAEKNKESSKKAMSGKKVKVKVGNAKPMKSPVKSKKKRTVRATKMNMSLLNRKEETK 277
Query: 977 EKTEDIAINIEVDVRPENIKDQKTGDVVVHVDESKSVNFGDGLGGSDPVKDYAELNIKVA 798
E+ ++ ++EVDV + +K ++ ++S VN+ + PVK+ + + +++
Sbjct: 278 EEA-NLTESVEVDVEHDEVKTDTLHSEII-TEKSAEVNYLENDKADSPVKNASGKHGEIS 335
Query: 797 LKTSKRASKLRAEKSSKDE 741
+ +K KS D+
Sbjct: 336 AQATKPNFNSEKGKSCLDD 354
>ref|NP_001174723.1| Os06g0286351 [Oryza sativa Japonica Group]
gi|55297386|dbj|BAD69240.1| putative Spo76 protein [Oryza
sativa Japonica Group] gi|215768096|dbj|BAH00325.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|255676941|dbj|BAH93451.1| Os06g0286351 [Oryza sativa
Japonica Group]
Length = 1561
Score = 79.3 bits (194), Expect = 5e-12
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Frame = -2
Query: 2102 EENAVTKGLPSEEKVEKPPQKRKRGADGEIVEAFLLSPKKD------------------F 1977
+++ T+ + S V+ P K K+GA E SPKK
Sbjct: 1270 DDSVDTELVTSPASVKTPVSKGKKGAKKPHAEILSSSPKKSDEAGSSKRTVDSGSLNGSI 1329
Query: 1976 SKLRPRTLVPSFRKIDLNESDFQRIVGKRVKVYWPQPRRWYAGHIESFDKEKKLHSIFYD 1797
+ +P+ LV K +++ + ++GKR+KV+WP +++Y G +ESFD K+ H++ YD
Sbjct: 1330 KRQKPK-LVSGLAKCTTHDTGSEDLIGKRIKVWWPLDKKFYEGVVESFDSSKRRHTVLYD 1388
Query: 1796 DGEKEILDLRKERFEL 1749
DG+ E+L+L KE++E+
Sbjct: 1389 DGDVEVLNLAKEKWEI 1404
Score = 60.1 bits (144), Expect = 3e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = -2
Query: 1502 PKIGNDADTERAEAFLLSSEKCLSKLRPRKLVPSFQKVDLNESDFERIVGKRVKVYWPVP 1323
PK ++A + + S + + +P KLV K +++ E ++GKR+KV+WP+
Sbjct: 1307 PKKSDEAGSSKRTVDSGSLNGSIKRQKP-KLVSGLAKCTTHDTGSEDLIGKRIKVWWPLD 1365
Query: 1322 RRWYAGCIKSFDMKKKLHRVCYDD 1251
+++Y G ++SFD K+ H V YDD
Sbjct: 1366 KKFYEGVVESFDSSKRRHTVLYDD 1389
>ref|XP_003603302.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
truncatula] gi|355492350|gb|AES73553.1| Sister chromatid
cohesion protein PDS5-like protein [Medicago truncatula]
Length = 802
Score = 76.3 bits (186), Expect = 4e-11
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 16/151 (10%)
Frame = -2
Query: 2153 KKHTGRSGSIADVER----EIEENAVTKGLPSEEKVEKPPQKRKRGADGEIVEAFLLSPK 1986
KK +G S S AD ++ ++++N G S + V+K +KRG E + SP+
Sbjct: 442 KKQSG-SASGADAKKHSVKKLDDNEGGGGSSSRQLVDK----KKRGQ-----EEMVSSPR 491
Query: 1985 KDFS-----KLRPRTLVPSFRKIDL---NESDF----QRIVGKRVKVYWPQPRRWYAGHI 1842
D KL T+ RK NESD Q +VG R++V+WP+ R++Y G I
Sbjct: 492 SDIKSSEDEKLEETTMTNGKRKHASGRKNESDIMEHDQNLVGVRLEVWWPKDRQFYKGVI 551
Query: 1841 ESFDKEKKLHSIFYDDGEKEILDLRKERFEL 1749
ESFD KK H + YDDGE E+L+L +E++ +
Sbjct: 552 ESFDSRKKKHKVVYDDGEVEVLNLAREKWNV 582
>gb|EEE65539.1| hypothetical protein OsJ_21006 [Oryza sativa Japonica Group]
Length = 1530
Score = 73.2 bits (178), Expect = 3e-10
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 26/144 (18%)
Frame = -2
Query: 2102 EENAVTKGLPSEEKVEKPPQKRKRGADGEIVEAFLLSPKKD------------------F 1977
+++ T+ + S V+ P K K+GA E SPKK
Sbjct: 1230 DDSVDTELVTSPASVKTPVSKGKKGAKKPHAEILSSSPKKSDEAGSSKRTVDSGSLNGSI 1289
Query: 1976 SKLRPRTL--------VPSFRKIDLNESDFQRIVGKRVKVYWPQPRRWYAGHIESFDKEK 1821
+ +P+ + + F +++ + ++GKR+KV+WP +++Y G +ESFD K
Sbjct: 1290 KRQKPKLVSGLAKVVSIVFFCSCTTHDTGSEDLIGKRIKVWWPLDKKFYEGVVESFDSSK 1349
Query: 1820 KLHSIFYDDGEKEILDLRKERFEL 1749
+ H++ YDDG+ E+L+L KE++E+
Sbjct: 1350 RRHTVLYDDGDVEVLNLAKEKWEI 1373