BLASTX nr result

ID: Coptis21_contig00004428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004428
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V...   568   e-160
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   564   e-158
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   555   e-156
ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus...   530   e-148

>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
            gi|296087508|emb|CBI34097.3| unnamed protein product
            [Vitis vinifera]
          Length = 513

 Score =  568 bits (1465), Expect = e-160
 Identities = 285/411 (69%), Positives = 323/411 (78%)
 Frame = +1

Query: 4    MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 183
            MA+  EL  +YNT+T++KE F P  +GKV MYVCGVTAYD SH+GHARA V FD+LYRYL
Sbjct: 1    MAETTEL-RVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYL 59

Query: 184  QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 363
            Q+LGYEVTYVRNFTDVDDKII+RANE GE+PL LS RFCQE+L+DM DLQCL PT QPRV
Sbjct: 60   QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRV 119

Query: 364  SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 543
            SDHM++I DMI QI +ND AY   DGDVYF++D    K+ N    Y RLSGRK EDNR G
Sbjct: 120  SDHMDQIKDMITQIINNDCAYII-DGDVYFAVD----KSPN----YGRLSGRKLEDNRAG 170

Query: 544  ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 723
            ERV V S+KRNP+DFALWKAAKP EPSWDSPWG GRPGWHIECSAMSA YLT  FDIHGG
Sbjct: 171  ERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230

Query: 724  GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 903
            G+DLIFPHHENE  QSCAAC + N+ YWMHNG VT  +EKMSKS GNFFTIR IT  YHP
Sbjct: 231  GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290

Query: 904  LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVEGPKGKVE 1083
            LALRYFL+ THYRSPVN+S  QLEIAS++VFYIYQTL D E+ LS F+E N     G+  
Sbjct: 291  LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVN-----GQNV 345

Query: 1084 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLLNKSLDSFKK 1236
             IT  A++ I KL TDF+TKM DDL T  ILNA+  EALR +N  L+  KK
Sbjct: 346  CITPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKK 396


>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
            gi|297735988|emb|CBI23962.3| unnamed protein product
            [Vitis vinifera]
          Length = 513

 Score =  564 bits (1454), Expect = e-158
 Identities = 282/411 (68%), Positives = 321/411 (78%)
 Frame = +1

Query: 4    MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 183
            MA+  EL  +YNT+T++KE   P  +GKV MYVCGVTAYD SH+GH RA V+FD+LYRYL
Sbjct: 1    MAEMTEL-RVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYL 59

Query: 184  QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 363
            Q+LGYEVTYVRNFTDVDDKII+RANE GE+PL LS  FCQE+L+DM DL CL PTHQPRV
Sbjct: 60   QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRV 119

Query: 364  SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 543
            SDHM++I DMI QI +ND AY T DGDVYF++D    K+ N    Y RLSGRK E+NR G
Sbjct: 120  SDHMDQIKDMITQIINNDCAY-TIDGDVYFAVD----KSPN----YGRLSGRKLENNRAG 170

Query: 544  ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 723
            ERV V S+KRNP+DFALWKAAKPGEPSWDSPWG GRPGWHIECSAMSA YLT  FDIHGG
Sbjct: 171  ERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230

Query: 724  GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 903
            G+DLIFPHHENE  QSCAAC + N+ YWMHNG VT  +EKMSKS GNFFTIR IT  YHP
Sbjct: 231  GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290

Query: 904  LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVEGPKGKVE 1083
            LALRYFL+ THYRSPVN+S  QLEIAS++VFYIYQTL D E+ LS F+E N     G+  
Sbjct: 291  LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVN-----GRNV 345

Query: 1084 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLLNKSLDSFKK 1236
             I   AQ+ I  L TDF+TKM DDL T  ILNA+  EALR +N  L+  KK
Sbjct: 346  CIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKK 396


>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
            gi|449508099|ref|XP_004163218.1| PREDICTED:
            cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 562

 Score =  555 bits (1430), Expect = e-156
 Identities = 265/410 (64%), Positives = 322/410 (78%), Gaps = 3/410 (0%)
 Frame = +1

Query: 16   KELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYLG 195
            KE F +YN++T++KE F  KE GKVGMYVCG+TAYD+SHIGHARA V FD+LYRYL++LG
Sbjct: 3    KEEFRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLG 62

Query: 196  YEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDHM 375
            YEVTYVRNFTDVDDKII+RANE+GE+P  LS RFCQE+L+DMADLQCL PTHQPRVSDH+
Sbjct: 63   YEVTYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHL 122

Query: 376  NEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERVE 555
             +I DMI QI  N Y Y   DGDV+FS+D + +        Y +LSG+K E++R GERV 
Sbjct: 123  EQIKDMITQIIKNGYGYAV-DGDVFFSVDKFPN--------YGQLSGQKLENHRAGERVA 173

Query: 556  VSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMDL 735
            V S+K NP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA YLT  FDIHGGG+DL
Sbjct: 174  VDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDL 233

Query: 736  IFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLALR 915
            IFPHHENE  QSCAAC +  I YWMHNG VT  +EKMSKS GNFFTIR IT++YHPL LR
Sbjct: 234  IFPHHENEVAQSCAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLR 293

Query: 916  YFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPKGKVER 1086
            +FL+S HYRSP+N++  QL+ ASD+V+YIYQT+ D E+ALS  +  N+    G  GK + 
Sbjct: 294  HFLISAHYRSPLNYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDP 353

Query: 1087 ITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLLNKSLDSFKK 1236
            ++S A+  I  L ++F+T+M DDL+T  IL  AF EAL+ +N +L S KK
Sbjct: 354  VSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKK 403


>ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|222864972|gb|EEF02103.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  551 bits (1419), Expect = e-154
 Identities = 267/414 (64%), Positives = 327/414 (78%), Gaps = 3/414 (0%)
 Frame = +1

Query: 4    MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 183
            MA+ +EL  +YN++T++KE F  +  GKV MYVCGVT+YD+SH+GHARA VAFDIL+RYL
Sbjct: 1    MANNEEL-KLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYL 59

Query: 184  QYLGYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 363
            Q+LGYEVTYVRNFTD+DDKII+RANE GEDPL LS RFC+E+L DM DLQCL PTHQPRV
Sbjct: 60   QHLGYEVTYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRV 119

Query: 364  SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 543
            +DH+ +I DMI QI + D AY  E GDV+F++        N    Y +LSG++ E+NR G
Sbjct: 120  TDHVEQIKDMITQIIEKDCAYAVE-GDVFFAV--------NKSPNYGQLSGQRLENNRAG 170

Query: 544  ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 723
            ERV V S+KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT  FDIHGG
Sbjct: 171  ERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGG 230

Query: 724  GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 903
            G+DLIFPHHENE  QSCAAC + ++ YWMHNG VT  +EKMSKS GNFFTIR IT++YHP
Sbjct: 231  GIDLIFPHHENEIAQSCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 290

Query: 904  LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPKG 1074
            LALR+FL+S HYRSP+N+S  QLE +SD+VFYIYQTL D E+AL  F+E +++   G   
Sbjct: 291  LALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNA 350

Query: 1075 KVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLLNKSLDSFKK 1236
             +  IT++AQ  I +LH DF+TKM DDL+T  +L  AF EAL+++N SL   KK
Sbjct: 351  NLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKK 404


>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
            gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 530

 Score =  530 bits (1366), Expect = e-148
 Identities = 252/411 (61%), Positives = 320/411 (77%), Gaps = 3/411 (0%)
 Frame = +1

Query: 13   QKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYL 192
            +K  F +YNT+ ++ E+F P   GKVGMYVCGVTAY +SHIGHARA V FD+L+RYLQ+L
Sbjct: 3    KKVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHL 62

Query: 193  GYEVTYVRNFTDVDDKIIQRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDH 372
            GYEVTY RNFTD+DDKII+RANE+GEDP  LS RFC+E+L DM  LQCL PTHQPRV+DH
Sbjct: 63   GYEVTYARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDH 122

Query: 373  MNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERV 552
            + +I DMI QI +N +AY +E GDV+F++D + +        Y +LSG+K E++R GER 
Sbjct: 123  IEQIKDMITQIINNGFAYPSE-GDVFFAVDKFPN--------YGQLSGQKLENHRAGER- 172

Query: 553  EVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMD 732
               ++KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT  FDIHGGG D
Sbjct: 173  NPDTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSD 232

Query: 733  LIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLAL 912
            LIFPHHENE  QS AAC + N+ YW+HNG VT  +EKMSKS GN+FTIR++T++YHPLA+
Sbjct: 233  LIFPHHENEITQSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAV 292

Query: 913  RYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPKGKVE 1083
            R+FL+S HYRSP+N++  QLE ASD++FYIYQTL D E+ALS F++ +++       KV 
Sbjct: 293  RHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVV 352

Query: 1084 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLLNKSLDSFKK 1236
             IT++A+  I+KL  +F+TKM DDL T  IL  AF +AL+ +N S+   KK
Sbjct: 353  GITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKK 403


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