BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004425
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   181   7e-44
gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]     181   7e-44
ref|XP_002268523.1| PREDICTED: succinate dehydrogenase [ubiquino...   176   2e-42
ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus c...   175   3e-42
ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron s...   174   9e-42

>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Cucumis sativus]
           gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  181 bits (458), Expect = 7e-44
 Identities = 92/137 (67%), Positives = 109/137 (79%), Gaps = 9/137 (6%)
 Frame = +1

Query: 73  ATNLLRRTITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPDSP 225
           AT +LRR ++R S  AS+  R  +IR +ASE    Q          LKTF+IYRWNPDSP
Sbjct: 2   ATGILRRALSRVS--ASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSP 59

Query: 226 SKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLAC 405
           SKP+LQ+Y++DLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNI+GCNGLAC
Sbjct: 60  SKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC 119

Query: 406 LTKIEADNSKTMISPLP 456
           LTKI + +S T I+PLP
Sbjct: 120 LTKISSGDSST-ITPLP 135


>gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
          Length = 277

 Score =  181 bits (458), Expect = 7e-44
 Identities = 92/137 (67%), Positives = 109/137 (79%), Gaps = 9/137 (6%)
 Frame = +1

Query: 73  ATNLLRRTITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPDSP 225
           AT +LRR ++R S  AS+  R  +IR +ASE    Q          LKTF+IYRWNPDSP
Sbjct: 2   ATGILRRVLSRVS--ASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSP 59

Query: 226 SKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLAC 405
           SKP+LQ+Y++DLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNI+GCNGLAC
Sbjct: 60  SKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC 119

Query: 406 LTKIEADNSKTMISPLP 456
           LTKI + +S T I+PLP
Sbjct: 120 LTKIPSGDSST-ITPLP 135


>ref|XP_002268523.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           1, mitochondrial [Vitis vinifera]
          Length = 276

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/132 (66%), Positives = 103/132 (78%), Gaps = 4/132 (3%)
 Frame = +1

Query: 73  ATNLLRRTITRYSTPASNSLRHHQIRLYASETPTNQK----LKTFSIYRWNPDSPSKPQL 240
           AT LLRR ++R    A+  LR       A  +  N +    LKTFSIYRWNPD+PSKP+L
Sbjct: 2   ATGLLRRGMSRVPGQAAKLLRSRAHATGAQSSEVNSEVAKTLKTFSIYRWNPDNPSKPEL 61

Query: 241 QDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLACLTKIE 420
           Q+YQ++LKDCGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI+GCNGLACLTKI 
Sbjct: 62  QNYQINLKDCGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIP 121

Query: 421 ADNSKTMISPLP 456
           +  S T ++PLP
Sbjct: 122 SGESST-VTPLP 132


>ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223533696|gb|EEF35431.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 284

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/139 (64%), Positives = 104/139 (74%), Gaps = 11/139 (7%)
 Frame = +1

Query: 73  ATNLLRR--TITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPD 219
           AT LLR+  +I R S  A  + R    R +ASE    +          LKTF IYRWNPD
Sbjct: 2   ATGLLRKGLSIARVSKTAPFTSRLIPTRFHASEAEAQKVEPKASSTASLKTFQIYRWNPD 61

Query: 220 SPSKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGL 399
           +PSKP LQDY++DLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNI+GCNGL
Sbjct: 62  NPSKPTLQDYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 121

Query: 400 ACLTKIEADNSKTMISPLP 456
           ACLTKI + ++ + I+PLP
Sbjct: 122 ACLTKISSGSTSSTITPLP 140


>ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum] gi|270303918|gb|ACZ71182.1| mitochondrial
           succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum]
          Length = 274

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/132 (65%), Positives = 104/132 (78%), Gaps = 4/132 (3%)
 Frame = +1

Query: 73  ATNLLRRTITRY--STPASNSL--RHHQIRLYASETPTNQKLKTFSIYRWNPDSPSKPQL 240
           AT+L+RR I+R   S PA+  L  R H     A +  +   LK+F IYRW PD+P KP+L
Sbjct: 2   ATSLIRRAISRVQSSAPAARLLVARAHASDSQAQKVESKPNLKSFQIYRWTPDNPGKPEL 61

Query: 241 QDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLACLTKIE 420
           ++Y++DLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNI+GCNGLACLTKI 
Sbjct: 62  KEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIS 121

Query: 421 ADNSKTMISPLP 456
           +D+  T I+PLP
Sbjct: 122 SDSEST-ITPLP 132