BLASTX nr result

ID: Coptis21_contig00004423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004423
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252...   115   1e-23
ref|XP_004144999.1| PREDICTED: uncharacterized protein LOC101205...   105   1e-20
ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_004160663.1| PREDICTED: uncharacterized LOC101205981 isof...    77   4e-12
ref|XP_003534600.1| PREDICTED: uncharacterized protein LOC100785...    77   6e-12

>ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252268 [Vitis vinifera]
           gi|296089095|emb|CBI38798.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  115 bits (289), Expect = 1e-23
 Identities = 85/242 (35%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
 Frame = +2

Query: 20  MGGKGQRRREKNYRAAHGDGGGGYSRLPPPPKTSEIDALPSKLRRLIDVTNNPPTQKRKI 199
           MGGKG+RRREKNYRAAHG    G+ RLPPPP  S++DALPSKLR+L+  T+    Q+ + 
Sbjct: 1   MGGKGRRRREKNYRAAHG----GHERLPPPPDLSKLDALPSKLRKLMAFTSPSTPQRPQG 56

Query: 200 SXXXXXXXXXXXXXXXXXXVVVKELNQKEESSSKT------------------NNRLXXX 325
           S                     K+L+ K+E + KT                   +     
Sbjct: 57  SAKASIDKEKKGKRGDAEE---KKLHPKDELNYKTTKIDAAGDGDHFMTSQDMEDNDGTV 113

Query: 326 XXXXXXXXXXXXXXXXXXDLRFDTIKELGGSYGSXXXXXXXXXXXXXXXXXXXXXXXXXQ 505
                             DLRF+   E     GS                          
Sbjct: 114 PSSTHEKGKRKRKRKQVKDLRFEAELEKVAGLGSKRRERKKKYLESRKKKHKKAKTEENL 173

Query: 506 EFPGHEEIKFGDIV--VXXXXXXXXXXXXXXXVQDASHERLRLQAVEAYRKRKGWESRPG 679
           +FP HE+IKFG++V                  VQDAS ERLRLQAV+AYRKRKGW SRPG
Sbjct: 174 DFPRHEKIKFGEVVEAPPKLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPG 233

Query: 680 LH 685
           +H
Sbjct: 234 IH 235


>ref|XP_004144999.1| PREDICTED: uncharacterized protein LOC101205981 [Cucumis sativus]
           gi|449473473|ref|XP_004153891.1| PREDICTED:
           uncharacterized protein LOC101210645 [Cucumis sativus]
          Length = 232

 Score =  105 bits (263), Expect = 1e-20
 Identities = 82/234 (35%), Positives = 102/234 (43%), Gaps = 13/234 (5%)
 Frame = +2

Query: 20  MGGKGQRRREKNYRAAHGDGGGGYSRLPPPPKTSEIDALPSKLRRLIDVTNNPPTQKRKI 199
           MGGKG RRRE+NYRAAHG    GY RLPPPP TS+ D LPSKLR+L+  T++   +  K+
Sbjct: 1   MGGKGMRRRERNYRAAHG----GYDRLPPPPDTSQPDTLPSKLRKLMSFTSSRSQEPEKV 56

Query: 200 SXXXXXXXXXXXXXXXXXXVVVKELNQKEESSSKT---NNRLXXXXXXXXXXXXXXXXXX 370
           S                     K+ NQK+ S SK    N+++                  
Sbjct: 57  SEDIQRKRKREAVNTD------KKSNQKDASGSKANGGNSQMPQRMGSDDDNNVHSKSSE 110

Query: 371 XXX---------DLRF-DTIKELGGSYGSXXXXXXXXXXXXXXXXXXXXXXXXXQEFPGH 520
                       DLRF D+++E   S                             +FP H
Sbjct: 111 KKNKKRKRKQVTDLRFEDSLEE--SSRRLKKRERWKKYQEAKKNKHKKAKTEEYLDFPKH 168

Query: 521 EEIKFGDIVVXXXXXXXXXXXXXXXVQDASHERLRLQAVEAYRKRKGWESRPGL 682
           E+IKFGD VV                Q AS ER RLQA+  YR RKGW SRPG+
Sbjct: 169 EKIKFGD-VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGI 221


>ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|222861513|gb|EEE99055.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +2

Query: 20  MGGKGQRRREKNYRAAHGDGGGGYSRLPPPPKTSEIDALPSKLRRLIDVTN 172
           MGGKG+RRREKNYRAAHG   G +S LPPPPK+S++DALPSKLR+LI +T+
Sbjct: 1   MGGKGRRRREKNYRAAHG---GSHSLLPPPPKSSQVDALPSKLRKLISLTS 48



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/61 (59%), Positives = 40/61 (65%)
 Frame = +2

Query: 503 QEFPGHEEIKFGDIVVXXXXXXXXXXXXXXXVQDASHERLRLQAVEAYRKRKGWESRPGL 682
           Q+FPG E+I+FGD VV               V DAS ERLRLQA+EAYR RKGW SRPGL
Sbjct: 237 QDFPGCEQIQFGD-VVQAPPKFTAPSKLLKNVHDASRERLRLQAIEAYRGRKGWTSRPGL 295

Query: 683 H 685
           H
Sbjct: 296 H 296


>ref|XP_004160663.1| PREDICTED: uncharacterized LOC101205981 isoform 1 [Cucumis sativus]
           gi|449498896|ref|XP_004160664.1| PREDICTED:
           uncharacterized LOC101205981 isoform 2 [Cucumis sativus]
          Length = 237

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +2

Query: 20  MGGKGQRRREKNYRAAHGDGGGGYSRLPPPPKTSEIDALPSKLRRLIDVTNNPPTQKRKI 199
           MGGKG RRRE+NYRAAHG    GY RLPPPP TS+ D LPSKLR+L+  T++   +  K+
Sbjct: 1   MGGKGMRRRERNYRAAHG----GYDRLPPPPDTSQPDTLPSKLRKLMSFTSSRSQEPEKV 56

Query: 200 S 202
           S
Sbjct: 57  S 57



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 30/59 (50%), Positives = 34/59 (57%)
 Frame = +2

Query: 506 EFPGHEEIKFGDIVVXXXXXXXXXXXXXXXVQDASHERLRLQAVEAYRKRKGWESRPGL 682
           +FP HE+IKFGD VV                Q AS ER RLQA+  YR RKGW SRPG+
Sbjct: 169 DFPKHEKIKFGD-VVEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGI 226


>ref|XP_003534600.1| PREDICTED: uncharacterized protein LOC100785748 [Glycine max]
          Length = 230

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 37/53 (69%), Positives = 42/53 (79%)
 Frame = +2

Query: 20  MGGKGQRRREKNYRAAHGDGGGGYSRLPPPPKTSEIDALPSKLRRLIDVTNNP 178
           MGGKG+RRREKNYRAAHG    GY+ LPPPP  S+ DALPSKLR++I  T NP
Sbjct: 1   MGGKGKRRREKNYRAAHG----GYTGLPPPPDASKHDALPSKLRQIISFTQNP 49



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = +2

Query: 506 EFPGHEEIKFGDIVVXXXXXXXXXXXXXXXVQDASHERLRLQAVEAYRKRKGWESRPGLH 685
           +FPG E+IKFGDIV                 ++AS ERLRLQA+E YR RKGW SRPG H
Sbjct: 165 DFPGQEKIKFGDIV----QAPPKLAVPPKAFKNASQERLRLQAIEEYRSRKGWASRPGSH 220


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