BLASTX nr result

ID: Coptis21_contig00004420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004420
         (1452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG28404.1| glyceraldehyde-3-phosphate dehydrogenase A [Pyrus...   619   e-175
gb|AEH04452.1| glyceraldehyde-3-phosphate dehydrogenase [Arachis...   616   e-174
gb|ADX97321.1| glyceraldehyde-3-phosphate dehydrogenase [Mangife...   615   e-174
ref|XP_003548805.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   614   e-173
ref|NP_001238484.1| glyceraldehyde-3-phosphate dehydrogenase A s...   613   e-173

>gb|AFG28404.1| glyceraldehyde-3-phosphate dehydrogenase A [Pyrus x bretschneideri]
          Length = 403

 Score =  619 bits (1597), Expect = e-175
 Identities = 320/383 (83%), Positives = 333/383 (86%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1449 SEFSGLRSSSNCIPFPRKSSDDFLSLIAFQTSAVGGNG-YKKGVVEAKLKVAINGFGRIG 1273
            +EFSGLR+SS C+PF RK+SDD  S+IAFQTSAVG NG YKKGV EAKLKVAINGFGRIG
Sbjct: 21   AEFSGLRTSSACLPFGRKTSDDLFSVIAFQTSAVGSNGGYKKGVTEAKLKVAINGFGRIG 80

Query: 1272 RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDAVVKPIFPDVISVDGKE 1093
            RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDA VKP+  + +SVDGK 
Sbjct: 81   RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNGLSVDGKI 140

Query: 1092 IKVVSSRNPIDLPWKDLGIDLVIEGTGVFVDREGAGRHILAGAKKVLITAPGKGDIPTYV 913
            IKVVSSRNPIDLPWKDL IDLVIEGTGVFVDREGAG+H+LAGAKKVLITAPGKGDIPTYV
Sbjct: 141  IKVVSSRNPIDLPWKDLEIDLVIEGTGVFVDREGAGKHLLAGAKKVLITAPGKGDIPTYV 200

Query: 912  VGVNADAYDPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXX 733
            VGVNADAY P E IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ       
Sbjct: 201  VGVNADAYSPDETIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 260

Query: 732  XXXXXXXXXXLNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKT 553
                      LNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKT
Sbjct: 261  RDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKT 320

Query: 552  FAEEVNAAFRESADNELNGILSVCDEPLVSMDFRCXXXXXXXXXXXXXXMGDDMVKVIAW 373
            FAEEVNAAFR+SA+ EL GILSVCDE LVS+DFRC              MGDDMVKVIAW
Sbjct: 321  FAEEVNAAFRDSAEKELAGILSVCDESLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAW 380

Query: 372  YDNEWGYSQRVVDLADIVANNWK 304
            YDNEWGYSQRVVDLADIVANNWK
Sbjct: 381  YDNEWGYSQRVVDLADIVANNWK 403


>gb|AEH04452.1| glyceraldehyde-3-phosphate dehydrogenase [Arachis hypogaea]
          Length = 405

 Score =  616 bits (1589), Expect = e-174
 Identities = 318/384 (82%), Positives = 336/384 (87%), Gaps = 2/384 (0%)
 Frame = -1

Query: 1449 SEFSGLR-SSSNCIPFPRKSSDDFLSLIAFQTSAVGGNG-YKKGVVEAKLKVAINGFGRI 1276
            SEFSGLR SSS+ +PF RK+SDDF S+I+FQTSAVG +G Y+KGV EAKLKVAINGFGRI
Sbjct: 22   SEFSGLRNSSSSYLPFSRKTSDDFHSIISFQTSAVGSSGGYRKGVTEAKLKVAINGFGRI 81

Query: 1275 GRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDAVVKPIFPDVISVDGK 1096
            GRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDA VKP+  D ISVDGK
Sbjct: 82   GRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGEDAISVDGK 141

Query: 1095 EIKVVSSRNPIDLPWKDLGIDLVIEGTGVFVDREGAGRHILAGAKKVLITAPGKGDIPTY 916
             IKVVS+RNP +LPWK+LG+DLVIEGTGVFVDREGAG+HI AGAKKVLITAPGKGDIPTY
Sbjct: 142  VIKVVSNRNPANLPWKELGVDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTY 201

Query: 915  VVGVNADAYDPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXX 736
            VVGVNADAY P EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ      
Sbjct: 202  VVGVNADAYSPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS 261

Query: 735  XXXXXXXXXXXLNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKK 556
                       LNIVPTSTGAAKAVALVLP+LKGKLNGIALRVPTPNVSVVDLVVQV+KK
Sbjct: 262  HRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKK 321

Query: 555  TFAEEVNAAFRESADNELNGILSVCDEPLVSMDFRCXXXXXXXXXXXXXXMGDDMVKVIA 376
            TFAEEVNAAFRESA+ ELNGILSVCDEPLVS+DFRC              MGDDMVKVIA
Sbjct: 322  TFAEEVNAAFRESAEKELNGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIA 381

Query: 375  WYDNEWGYSQRVVDLADIVANNWK 304
            WYDNEWGYSQRVVDLADIVAN+WK
Sbjct: 382  WYDNEWGYSQRVVDLADIVANSWK 405


>gb|ADX97321.1| glyceraldehyde-3-phosphate dehydrogenase [Mangifera indica]
          Length = 401

 Score =  615 bits (1587), Expect = e-174
 Identities = 313/382 (81%), Positives = 335/382 (87%)
 Frame = -1

Query: 1449 SEFSGLRSSSNCIPFPRKSSDDFLSLIAFQTSAVGGNGYKKGVVEAKLKVAINGFGRIGR 1270
            ++FSGLR+S++ +PF RK+S+DFLS+IAFQTSAVG +GY+KG  EAKLKVAINGFGRIGR
Sbjct: 21   TDFSGLRNSAS-LPFSRKTSEDFLSVIAFQTSAVGNSGYRKGAAEAKLKVAINGFGRIGR 79

Query: 1269 NFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDAVVKPIFPDVISVDGKEI 1090
            NFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDA VKP+  + ISVDGK I
Sbjct: 80   NFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDANVKPVGDNAISVDGKVI 139

Query: 1089 KVVSSRNPIDLPWKDLGIDLVIEGTGVFVDREGAGRHILAGAKKVLITAPGKGDIPTYVV 910
            KVV++RNP+DLPW DLG+DLVIEGTGVFVDR+GAG+HI AGAKKVLITAPGKGDIPTYVV
Sbjct: 140  KVVTNRNPLDLPWGDLGVDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVV 199

Query: 909  GVNADAYDPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXX 730
            GVNADAY+P EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ        
Sbjct: 200  GVNADAYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHR 259

Query: 729  XXXXXXXXXLNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKTF 550
                     LNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQV+KKTF
Sbjct: 260  DLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTF 319

Query: 549  AEEVNAAFRESADNELNGILSVCDEPLVSMDFRCXXXXXXXXXXXXXXMGDDMVKVIAWY 370
            AEEVNAAFRESAD EL GILSVCDEPLVS+DFRC              MGDDMVKVIAWY
Sbjct: 320  AEEVNAAFRESADKELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWY 379

Query: 369  DNEWGYSQRVVDLADIVANNWK 304
            DNEWGYSQRVVDLADIVAN WK
Sbjct: 380  DNEWGYSQRVVDLADIVANKWK 401


>ref|XP_003548805.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A,
            chloroplastic-like [Glycine max]
          Length = 403

 Score =  614 bits (1584), Expect = e-173
 Identities = 318/383 (83%), Positives = 329/383 (85%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1449 SEFSGLRSSSNCIPFPRKSSDDFLSLIAFQTSAVGGNG-YKKGVVEAKLKVAINGFGRIG 1273
            SEFSGLRSSS  +PF RKSS+DF S+IAFQT AVG +G YKKGV EAKLKVAINGFGRIG
Sbjct: 21   SEFSGLRSSSGFLPFSRKSSEDFHSVIAFQTYAVGSSGGYKKGVTEAKLKVAINGFGRIG 80

Query: 1272 RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDAVVKPIFPDVISVDGKE 1093
            RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDS LG FDA VKP+  D+ISVDGKE
Sbjct: 81   RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSILGTFDADVKPVGSDIISVDGKE 140

Query: 1092 IKVVSSRNPIDLPWKDLGIDLVIEGTGVFVDREGAGRHILAGAKKVLITAPGKGDIPTYV 913
            IKVVS RNP +LPWKDLGIDLVIEGTGVFVDREGAG+HI AGAKKVLITAPGKGDIPTYV
Sbjct: 141  IKVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYV 200

Query: 912  VGVNADAYDPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXX 733
            VGVN   Y P EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ       
Sbjct: 201  VGVNEYDYSPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 260

Query: 732  XXXXXXXXXXLNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKT 553
                      LNIVPTSTGAAKAVALVLP+LKGKLNGIALRVPTPNVSVVDLVVQV+KKT
Sbjct: 261  RDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKT 320

Query: 552  FAEEVNAAFRESADNELNGILSVCDEPLVSMDFRCXXXXXXXXXXXXXXMGDDMVKVIAW 373
            FAEEVNAAFRESADNEL GILSVCDEPLVS+DFRC              MGDDMVKVIAW
Sbjct: 321  FAEEVNAAFRESADNELQGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAW 380

Query: 372  YDNEWGYSQRVVDLADIVANNWK 304
            YDNEWGYSQRVVDLADIVAN WK
Sbjct: 381  YDNEWGYSQRVVDLADIVANKWK 403


>ref|NP_001238484.1| glyceraldehyde-3-phosphate dehydrogenase A subunit [Glycine max]
            gi|77540210|gb|ABA86963.1| glyceraldehyde-3-phosphate
            dehydrogenase A subunit [Glycine max]
          Length = 403

 Score =  613 bits (1580), Expect = e-173
 Identities = 318/383 (83%), Positives = 329/383 (85%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1449 SEFSGLRSSSNCIPFPRKSSDDFLSLIAFQTSAVGGNG-YKKGVVEAKLKVAINGFGRIG 1273
            SEFSGLRSSS  +PF RKSS+DF S+IAFQT AVG +G YKKGV EAKLKVAINGFGRIG
Sbjct: 21   SEFSGLRSSSGFLPFSRKSSEDFHSVIAFQTYAVGSSGGYKKGVTEAKLKVAINGFGRIG 80

Query: 1272 RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDAVVKPIFPDVISVDGKE 1093
            RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDS LG FDA VKP+  +VISVDGKE
Sbjct: 81   RNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSILGTFDADVKPVGSNVISVDGKE 140

Query: 1092 IKVVSSRNPIDLPWKDLGIDLVIEGTGVFVDREGAGRHILAGAKKVLITAPGKGDIPTYV 913
            IKVVS RNP +LPWKDLGIDLVIEGTGVFVDREGAG+HI AGAKKVLITAPGKGDIPTYV
Sbjct: 141  IKVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYV 200

Query: 912  VGVNADAYDPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXX 733
            VGVN   Y P EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ       
Sbjct: 201  VGVNEYDYSPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 260

Query: 732  XXXXXXXXXXLNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVTKKT 553
                      LNIVPTSTGAAKAVALVLP+LKGKLNGIALRVPTPNVSVVDLVVQV+KKT
Sbjct: 261  RDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKT 320

Query: 552  FAEEVNAAFRESADNELNGILSVCDEPLVSMDFRCXXXXXXXXXXXXXXMGDDMVKVIAW 373
            FAEEVNAAFRESADNEL GILSVCDEPLVS+DFRC              MGDDMVKVIAW
Sbjct: 321  FAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAW 380

Query: 372  YDNEWGYSQRVVDLADIVANNWK 304
            YDNEWGYSQRVVDLADIVAN WK
Sbjct: 381  YDNEWGYSQRVVDLADIVANKWK 403


Top