BLASTX nr result
ID: Coptis21_contig00004419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004419 (2516 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,... 555 e-155 ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2... 555 e-155 ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267... 551 e-154 ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 547 e-153 emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera] 547 e-153 >ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Length = 478 Score = 555 bits (1431), Expect = e-155 Identities = 283/477 (59%), Positives = 322/477 (67%) Frame = +2 Query: 518 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 697 MESDLGKLFIGGISWDT+E+RLKEYF YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 698 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 877 ERV+++KH IDGRTVEAKKAVPRDDQHILNRN+SSIHGSPGP RTKKIFVGGLASTVT++ Sbjct: 61 ERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDN 120 Query: 878 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 1057 DFKKYF+QFG ITDVVVMYDHNTQRPRGFGFITYDSEDAV++VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180 Query: 1058 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1237 AVPKELSPGPSRSPL GYNYGLSR N+FLN Y QGYN NS+G +G+RMD Sbjct: 181 AVPKELSPGPSRSPLIGYNYGLSRTNNFLNAYAQGYNMNSVGGFGMRMDSRFSPLASGRS 240 Query: 1238 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1417 YGMSMN EPGL+PSYGG +NF S +GR L+PYYSG+ +RY Sbjct: 241 GFPPFGTTGYGMSMNLEPGLTPSYGGGSNFGNSPGYGRMLSPYYSGNSSRYSTPIGYGVG 300 Query: 1418 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1597 VW GLN ++NPAS NWG S +SA Sbjct: 301 NARNDSVLSPTTRNVWGNGGLNSAANPASPGAFLGSGSGSFGVSFGNSGTNWGPS-HVSA 359 Query: 1598 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXAVGPTPSLSASNGGFDGAYGELYG 1777 + P S + SN G++G+YG+LY Sbjct: 360 QGGGSASAYTSGSMGYGSGDSSYGLGGGAYGRNNGSNAAPNSSFAGSNSGYEGSYGDLYR 419 Query: 1778 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSRGI 1948 GSVYGD TWRS T EL+ A+DVT+K+S GY+G Y VT+RQS+RGI Sbjct: 420 SGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQSNRGI 476 >ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa] Length = 478 Score = 555 bits (1429), Expect = e-155 Identities = 285/478 (59%), Positives = 324/478 (67%) Frame = +2 Query: 518 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 697 MESDLGKLFIGGISWDT+E+RLKEYF YG+VVEAVIM+DR TGRARGFGFVVFADP+VA Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60 Query: 698 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 877 ERV+MEKH +DGRTVEAKKAVPRDDQHIL+RN+SSIHGSPGP RTKKIFVGGLASTVTE+ Sbjct: 61 ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTEN 120 Query: 878 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 1057 DFKKYF+QFG ITDVVVMYDHNT RPRGFGFITYDSE+AV++VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180 Query: 1058 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1237 AVPKELSPGPSRSPL GYNYGL+R N+FLN Y QGYN NSIG +G+RMD Sbjct: 181 AVPKELSPGPSRSPLMGYNYGLTRANNFLNAYAQGYNMNSIGGFGMRMDSRFNPLATGRS 240 Query: 1238 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1417 YGMSMN EP LSPSYGG +NF+ + A+GR +PYYSG+P+RY Sbjct: 241 GFAPFSTAGYGMSMNLEPALSPSYGGVSNFSNTPAYGRISSPYYSGNPSRYSTPVGYGEG 300 Query: 1418 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1597 VW N ++NPAS NWG SP +SA Sbjct: 301 NARNDSLLSPTTWNVWGNGSHNTATNPASPGPLLGSRTGNFGVSFGNSGSNWGTSP-VSA 359 Query: 1598 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXAVGPTPSLSASNGGFDGAYGELYG 1777 + PT S S S GG++G+YG+LY Sbjct: 360 QGRGSASGYTTGSMGYGSGDNNYGLSGAGYVRNSGTGAPPTSSFSGSAGGYEGSYGDLYR 419 Query: 1778 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSRGIA 1951 GSVYGD TW+SAT ELD ASDVT+K+S GY+G Y VT+RQS+RGIA Sbjct: 420 SGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQSNRGIA 477 >ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera] Length = 478 Score = 551 bits (1421), Expect = e-154 Identities = 286/479 (59%), Positives = 320/479 (66%) Frame = +2 Query: 518 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 697 MESDLGKLFIGGISWDT+EDRLKEYF++YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 698 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 877 ERVVM+KH IDGRTVEAKKAVPRDDQH+LNRN+ SIHGSPGP RTKKIFVGGLASTVTES Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120 Query: 878 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 1057 DFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYDSE+AVE+VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180 Query: 1058 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1237 AVPKE SPGPSRSPL GYNYGL R N+FLN Y QGYN +S+G+YG+RMD Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240 Query: 1238 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1417 YGM MN E GLSPSY GN++F+ + +GR LNPYYSG+ NRY Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300 Query: 1418 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1597 VW LN ++NPAS NWG SP I A Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSP-IPA 359 Query: 1598 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXAVGPTPSLSASNGGFDGAYGELYG 1777 N+ V S + S GG++G+Y ELY Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYR 419 Query: 1778 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSRGIAA 1954 GSVY D TWR+ TSELD ASDVT+ ++ Y+G YSV NRQS+RGIAA Sbjct: 420 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRGIAA 478 >ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera] Length = 478 Score = 547 bits (1409), Expect = e-153 Identities = 287/480 (59%), Positives = 322/480 (67%), Gaps = 1/480 (0%) Frame = +2 Query: 518 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 697 M+SDLGKLFIGGISWDTNEDRLK+YF +YG+VVEAVIMKDRTTGRARGFGFVVFADP VA Sbjct: 1 MQSDLGKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA 60 Query: 698 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 877 ERV+ EKH IDGR VEAKKAVP+DDQ IL+RNS SIHGSPGP RT+KIFVGGLASTVTES Sbjct: 61 ERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTES 120 Query: 878 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 1057 DFKKYFDQFG ITDVVVMYDHNTQRPRGFGFITY+SE+AV+KVL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKR 180 Query: 1058 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1237 AVPKELSPGP RS LGG+NYGLSRVNSFL+ Y QGY P+++G YGVRMD Sbjct: 181 AVPKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAGGRS 240 Query: 1238 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1417 YGM MNFEPGLS SYGG+ NFN +L +GRGLNPYY G+ NR+ Sbjct: 241 GFPPFGS-GYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGYDGG 299 Query: 1418 XXXXXXXXXXXXXXVWSTAGLNYSSNPA-STXXXXXXXXXXXXXXXXXXXXNWGLSPSIS 1594 +W GLN+ +N A S+ +WG S IS Sbjct: 300 NGGNSSFFSSATRNLWGNGGLNFGTNSATSSAFTGSASGTTGGGAFGNSGTSWG-SSLIS 358 Query: 1595 AXXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXAVGPTPSLSASNGGFDGAYGELY 1774 A + +V PT S +ASN G+DGA E Y Sbjct: 359 AQGGGSNISSNSGNLGYGGGDSSYGLGVGGYGRNSGTSVAPTSSYAASNSGYDGALAEFY 418 Query: 1775 GVGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSRGIAA 1954 GSVYGD TWR + +E D ASDV +K+S GYVGGYSVT RQS+RGIAA Sbjct: 419 SGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGIAA 478 >emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera] Length = 482 Score = 547 bits (1409), Expect = e-153 Identities = 283/476 (59%), Positives = 317/476 (66%) Frame = +2 Query: 518 MESDLGKLFIGGISWDTNEDRLKEYFQSYGDVVEAVIMKDRTTGRARGFGFVVFADPVVA 697 MESDLGKLFIGGISWDT+EDRLKEYF++YG+VVEAVIM+DRTTGRARGFGFVVFADP VA Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60 Query: 698 ERVVMEKHQIDGRTVEAKKAVPRDDQHILNRNSSSIHGSPGPARTKKIFVGGLASTVTES 877 ERVVM+KH IDGRTVEAKKAVPRDDQH+LNRN+ SIHGSPGP RTKKIFVGGLASTVTES Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120 Query: 878 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVEKVLFKTFHELNGKMVEVKR 1057 DFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYDSE+AVE+VL KTFHELNGKMVEVKR Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180 Query: 1058 AVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYNPNSIGNYGVRMDXXXXXXXXXXX 1237 AVPKE SPGPSRSPL GYNYGL R N+FLN Y QGYN +S+G+YG+RMD Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240 Query: 1238 XXXXXXXXAYGMSMNFEPGLSPSYGGNTNFNTSLAFGRGLNPYYSGSPNRYXXXXXXXXX 1417 YGM MN E GLSPSY GN++F+ + +GR LNPYYSG+ NRY Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300 Query: 1418 XXXXXXXXXXXXXXVWSTAGLNYSSNPASTXXXXXXXXXXXXXXXXXXXXNWGLSPSISA 1597 VW LN ++NPAS NWG SP I A Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSP-IPA 359 Query: 1598 XXXXXXXXXXXXXXNFXXXXXXXXXXXXXXXXXXXXAVGPTPSLSASNGGFDGAYGELYG 1777 N+ V S + S GG++G+Y ELY Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYR 419 Query: 1778 VGSVYGDPTWRSATSELDXXXXXXXXXXXXASDVTSKNSAGYVGGYSVTNRQSSRG 1945 GSVY D TWR+ TSELD ASDVT+ ++ Y+G YSV NRQS+RG Sbjct: 420 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRG 475