BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004417
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT...   242   7e-62
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]   240   2e-61
ref|XP_002522996.1| conserved hypothetical protein [Ricinus comm...   236   5e-60
ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycin...   232   7e-59

>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
           gi|297735982|emb|CBI23956.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  242 bits (617), Expect = 7e-62
 Identities = 126/176 (71%), Positives = 140/176 (79%), Gaps = 4/176 (2%)
 Frame = +1

Query: 49  MASIPCTFHPTFPC----SSSSRWKTSCQLLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 216
           MASIPCT H  F      S S+    + QLLG  RKL W    S  + +GP+NGS+  CW
Sbjct: 1   MASIPCTTHLLFTSKPQISPSNPPIFTSQLLGIPRKLSW----STPTRLGPSNGSRATCW 56

Query: 217 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLRLDIHPVD 396
           F+FG  GVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 397 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 564
           ILLMMAASEGD+PKIEELLRAGASYTVKD DGRTA++RAAN+EIK  IL FS QKA
Sbjct: 117 ILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172


>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
          Length = 172

 Score =  240 bits (612), Expect = 2e-61
 Identities = 125/176 (71%), Positives = 139/176 (78%), Gaps = 4/176 (2%)
 Frame = +1

Query: 49  MASIPCTFHPTFPC----SSSSRWKTSCQLLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 216
           MASIPCT H  F      S S+    + Q LG  RKL W    S  + +GP+NGS+  CW
Sbjct: 1   MASIPCTTHLLFTSKPQISPSNPPIFTSQXLGIPRKLSW----STPTRLGPSNGSRATCW 56

Query: 217 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLRLDIHPVD 396
           F+FG  GVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 397 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 564
           ILLMMAASEGD+PKIEELLRAGASYTVKD DGRTA++RAAN+EIK  IL FS QKA
Sbjct: 117 ILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFSTQKA 172


>ref|XP_002522996.1| conserved hypothetical protein [Ricinus communis]
           gi|223537808|gb|EEF39426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 175

 Score =  236 bits (601), Expect = 5e-60
 Identities = 133/178 (74%), Positives = 144/178 (80%), Gaps = 6/178 (3%)
 Frame = +1

Query: 49  MASIP---CTFHPTFPCSSSSRWKTSCQLLGNGRK-LGW-FKVCSVRSI-IGPTNGSKTK 210
           MASIP   CT H T P +   + KT+  L       LG   KVC VR   IGP+NGS+ K
Sbjct: 1   MASIPSSSCTAH-TLPITCKPQ-KTATFLPNFSTPFLGTKSKVCLVRPCRIGPSNGSRVK 58

Query: 211 CWFKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLRLDIHP 390
           CWFKFGKNGVDAEGAGIYGSQSR+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  DIHP
Sbjct: 59  CWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHP 118

Query: 391 VDILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 564
           VDILLM+AASEGDKPKIEELLRAGASY VKD DGRTA+DR ANEEI++FI+ FSVQKA
Sbjct: 119 VDILLMLAASEGDKPKIEELLRAGASYNVKDADGRTALDR-ANEEIREFIVGFSVQKA 175


>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  234 bits (597), Expect = 1e-59
 Identities = 123/176 (69%), Positives = 136/176 (77%), Gaps = 4/176 (2%)
 Frame = +1

Query: 49  MASIPCTFHPTFPCSSSSRW----KTSCQLLGNGRKLGWFKVCSVRSIIGPTNGSKTKCW 216
           MASI  T H T   +  S      K + Q LG    +GW + C     IGP+NGS+ KCW
Sbjct: 1   MASILSTTHLTLASNPQSSQPFLPKLNSQFLGLQSNVGWLRPCR----IGPSNGSRAKCW 56

Query: 217 FKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALLRLDIHPVD 396
           FKFGKNGVDAEGAGIYGSQ+R+DFDRDDVEQYFNYMGMLAVEGTYDKMEALL  +IHPVD
Sbjct: 57  FKFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 116

Query: 397 ILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFSVQKA 564
           ILLM+AASEGDKPKIEELLRAGA Y +KD DGRTA+DR ANEE K FIL  SV+KA
Sbjct: 117 ILLMLAASEGDKPKIEELLRAGAGYDIKDADGRTALDR-ANEETKDFILGLSVRKA 171


>ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycine max]
           gi|255630625|gb|ACU15672.1| unknown [Glycine max]
          Length = 181

 Score =  232 bits (591), Expect = 7e-59
 Identities = 122/184 (66%), Positives = 140/184 (76%), Gaps = 12/184 (6%)
 Frame = +1

Query: 49  MASIPCTFHPTFPCSSS------------SRWKTSCQLLGNGRKLGWFKVCSVRSIIGPT 192
           MASIPC  H   P +S+            S    + + LG  R++G   + S   IIGP+
Sbjct: 1   MASIPCITHHHHPITSNPNNNNAFPSPHVSASNLASRFLGTRRRVGSHSLTS--RIIGPS 58

Query: 193 NGSKTKCWFKFGKNGVDAEGAGIYGSQSREDFDRDDVEQYFNYMGMLAVEGTYDKMEALL 372
           NGSK+ CWF+FGKNGVDA+GAGIYGSQ R+DFDRDDVEQYFNYMGML VEGTYDKMEALL
Sbjct: 59  NGSKSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLTVEGTYDKMEALL 118

Query: 373 RLDIHPVDILLMMAASEGDKPKIEELLRAGASYTVKDVDGRTAIDRAANEEIKQFILEFS 552
             +IHPVDILL++AASEGDKPKIEELLRAGA Y VKD DGRTA+DRAA +EIK FIL FS
Sbjct: 119 SQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAA-DEIKDFILNFS 177

Query: 553 VQKA 564
           VQ+A
Sbjct: 178 VQRA 181