BLASTX nr result
ID: Coptis21_contig00004415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00004415
(468 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631263.1| PREDICTED: LOW QUALITY PROTEIN: probable nuc... 79 2e-25
emb|CAN77321.1| hypothetical protein VITISV_008818 [Vitis vinifera] 79 2e-25
emb|CBI28541.3| unnamed protein product [Vitis vinifera] 79 2e-25
gb|ACJ85567.1| unknown [Medicago truncatula] gi|388516263|gb|AFK... 78 6e-25
ref|XP_002525368.1| nucleoredoxin, putative [Ricinus communis] g... 70 2e-24
>ref|XP_003631263.1| PREDICTED: LOW QUALITY PROTEIN: probable nucleoredoxin 1-like
[Vitis vinifera]
Length = 733
Score = 79.3 bits (194), Expect(2) = 2e-25
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
VY KL GESF++V+I LD+ EE+FKK F MPWL+LPF+DKSC KL +YFEL
Sbjct: 225 VYEKLRAKGESFEIVMISLDDEEESFKKYFGSMPWLALPFRDKSCEKLARYFEL 278
Score = 61.2 bits (147), Expect(2) = 2e-25
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 3 VISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQG 182
+I EYG AYPFT E+I Q+L ++L S SRD++IS +G +VPVSEL+G
Sbjct: 141 IIQEYGVEAYPFTPEKIKEMKEKEETARKEQSLRSILVSQSRDYVISTDGKKVPVSELEG 200
Query: 183 KIV 191
K V
Sbjct: 201 KFV 203
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 6 ISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQGK 185
I E+G AYPFT E+ QTL ++L SG RDF+I +G ++PVS+L GK
Sbjct: 302 IQEHGIQAYPFTPEKFAELEEIEKAKREAQTLESILVSGDRDFVIGKDGVKIPVSDLVGK 361
>emb|CAN77321.1| hypothetical protein VITISV_008818 [Vitis vinifera]
Length = 572
Score = 79.3 bits (194), Expect(2) = 2e-25
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
VY KL GESF++V+I LD+ EE+FKK F MPWL+LPF+DKSC KL +YFEL
Sbjct: 225 VYEKLRAKGESFEIVMISLDDEEESFKKYFGSMPWLALPFRDKSCEKLARYFEL 278
Score = 61.2 bits (147), Expect(2) = 2e-25
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 3 VISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQG 182
+I EYG AYPFT E+I Q+L ++L S SRD++IS +G +VPVSEL+G
Sbjct: 141 IIQEYGVEAYPFTPEKIKEMKEKEETARKEQSLRSILVSQSRDYVISTDGKKVPVSELEG 200
Query: 183 KIV 191
K V
Sbjct: 201 KFV 203
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 6 ISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQGK 185
I E+G AYPFT E+ QTL ++L SG RDF+I +G ++PVS+L GK
Sbjct: 302 IQEHGIQAYPFTPEKFAELEEIEKAKREAQTLESILVSGDRDFVIGKDGVKIPVSDLVGK 361
>emb|CBI28541.3| unnamed protein product [Vitis vinifera]
Length = 490
Score = 79.3 bits (194), Expect(2) = 2e-25
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
VY KL GESF++V+I LD+ EE+FKK F MPWL+LPF+DKSC KL +YFEL
Sbjct: 225 VYEKLRAKGESFEIVMISLDDEEESFKKYFGSMPWLALPFRDKSCEKLARYFEL 278
Score = 61.2 bits (147), Expect(2) = 2e-25
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 3 VISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQG 182
+I EYG AYPFT E+I Q+L ++L S SRD++IS +G +VPVSEL+G
Sbjct: 141 IIQEYGVEAYPFTPEKIKEMKEKEETARKEQSLRSILVSQSRDYVISTDGKKVPVSELEG 200
Query: 183 KIV 191
K V
Sbjct: 201 KFV 203
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 6 ISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQGK 185
I E+G AYPFT E+ QTL ++L SG RDF+I +G ++PVS+L GK
Sbjct: 302 IQEHGIQAYPFTPEKFAELEEIEKAKREAQTLESILVSGDRDFVIGKDGVKIPVSDLVGK 361
>gb|ACJ85567.1| unknown [Medicago truncatula] gi|388516263|gb|AFK46193.1| unknown
[Medicago truncatula]
Length = 570
Score = 77.8 bits (190), Expect(2) = 6e-25
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
VY KL E GE+F+VV I LD+ E+AFKK E PWLSLP +DK+C KLI+YFEL
Sbjct: 224 VYKKLKENGENFEVVFIPLDDEEDAFKKELESAPWLSLPLKDKTCAKLIQYFEL 277
Score = 61.2 bits (147), Expect(2) = 6e-25
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +3
Query: 3 VISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQG 182
+I YGA AYPFT +R+ Q+L ++LAS SRDFLIS++G ++P+ EL+G
Sbjct: 140 IIRVYGAEAYPFTSKRVQELKDIEEEAKRNQSLRSILASRSRDFLISSDGNEIPIPELEG 199
Query: 183 KIV 191
K V
Sbjct: 200 KTV 202
Score = 55.1 bits (131), Expect(2) = 1e-12
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +3
Query: 6 ISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQGK 185
I ++G AYPFT E+ QTL +VL SG +DF+I +G ++PVSEL GK
Sbjct: 301 IEDHGVDAYPFTPEKFSELDEIAKAKEASQTLESVLVSGDQDFVIDKDGKKIPVSELVGK 360
Query: 186 IV 191
V
Sbjct: 361 TV 362
Score = 42.4 bits (98), Expect(2) = 1e-12
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 308 YNKLN-EGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
Y+K+ ++ +VV I D ++E+F + F GMPWL+LPF D L + F++
Sbjct: 385 YHKIKARNNDALEVVFISSDRDQESFNEFFAGMPWLALPFGDTRKEFLSRKFKV 438
Score = 44.3 bits (103), Expect(2) = 8e-07
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCR 442
V ++L+ G F+VV + D+++EAFK F MPWL++PF D R
Sbjct: 64 VCDELSPNG-GFEVVFVSADKDDEAFKSYFSKMPWLAIPFSDSETR 108
Score = 33.5 bits (75), Expect(2) = 8e-07
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 99 LNTVLASGSRDFLISNNGTQVPVSELQGK 185
++++L+S RDFL+ N G QV + L+GK
Sbjct: 12 VHSILSSSDRDFLLRNTGDQVKIDSLKGK 40
>ref|XP_002525368.1| nucleoredoxin, putative [Ricinus communis]
gi|223535331|gb|EEF37006.1| nucleoredoxin, putative
[Ricinus communis]
Length = 553
Score = 69.7 bits (169), Expect(2) = 2e-24
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQDKSCRKLIKYFEL 466
VY KL E GE F+VVLI +D +E FK+ E MPWL+LPF+DKS +L +YFEL
Sbjct: 225 VYKKLKEKGEKFEVVLISMDYDENNFKQGLETMPWLALPFEDKSRERLARYFEL 278
Score = 67.8 bits (164), Expect(2) = 2e-24
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +3
Query: 6 ISEYGAGAYPFTHERIXXXXXXXXXXXXXQTLNTVLASGSRDFLISNNGTQVPVSELQGK 185
I EYGA YPFT ER+ QTL+++L S SRDFLIS +GT++PVSEL+GK
Sbjct: 142 IREYGAEGYPFTPERVEYFRQEEENAKKNQTLSSILVSSSRDFLISKDGTKIPVSELEGK 201
Query: 186 IV 191
+V
Sbjct: 202 MV 203
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 305 VYNKLNEGGESFKVVLICLDENEEAFKKSFEGMPWLSLPFQD-KSCRKLIKYFEL 466
VY +L+ G+ F+VV I D + E+F F MPWL++PF D ++C+ L F++
Sbjct: 65 VYEELSLKGD-FEVVFISSDRDAESFDAYFSKMPWLAIPFSDQETCKHLKDLFKV 118
Score = 36.6 bits (83), Expect(2) = 4e-07
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 99 LNTVLASGSRDFLISNNGTQVPVSELQGKIV 191
L ++L+S RDFLI +NG QV +S L GKIV
Sbjct: 13 LLSLLSSDDRDFLIRSNGDQVKISNLVGKIV 43