BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004405
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, ch...   741   0.0  
emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]   741   0.0  
emb|CBI22803.3| unnamed protein product [Vitis vinifera]              740   0.0  
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var....   729   0.0  
dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum...   719   0.0  

>ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
            vinifera]
          Length = 452

 Score =  741 bits (1913), Expect = 0.0
 Identities = 350/449 (77%), Positives = 384/449 (85%), Gaps = 7/449 (1%)
 Frame = -2

Query: 1583 MASWVLSECGIRPLPQNLYQPRTRF--NANNNGYKVKLSVSRINDVGRKNLSLIGC-RSR 1413
            MASWVLSECGIRPLPQ   +PRT    N+ NN  +++   S  +    K    IGC + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1412 DWCLKVSAPLKVATLDGEGGG----MRNGVEEKVEFDPSLPPPFGIADIRASIPKHCWVK 1245
            +W LKVSAPL+V   + E  G      NGVEE+ EFDP  PPPF +ADIRA+IPKHCWVK
Sbjct: 61   NWALKVSAPLRVEYGEEEERGEIINRVNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVK 120

Query: 1244 DPWKSMSYVFRDVVIVFGLAAAAAYFNSWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 1065
            DPW+SMSYV RDVV+V GLAAAAAY N+W+VWPLYWAAQGTMFWALFVLGHDCGHGSFSN
Sbjct: 121  DPWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 180

Query: 1064 DHKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPVSESLFNKMDFITRK 885
            +  LNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVE DESWHP+ E ++  +D +TR 
Sbjct: 181  NPTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRM 240

Query: 884  LRFTVPFPMLAYPFYLWGRSPGKKGSHFNPSSDLFVPSERKDVITSTTCWTAMAALLVGL 705
            LRFTVPFPMLAYPFYLW RSPGK GSHF+PSSDLFVPSERK+VITST CWTAMAALLVGL
Sbjct: 241  LRFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGL 300

Query: 704  SFVAGPIQMLKLYGGPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRD 525
            SFV GPIQMLKLYG PYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRD
Sbjct: 301  SFVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRD 360

Query: 524  YGIINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRVPKKSEGPLPFHLIGS 345
            YG INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYR PK S GPLPFHLIGS
Sbjct: 361  YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGS-GPLPFHLIGS 419

Query: 344  LIRSMKQDHYVSDTGEILYYQADPQLSES 258
            L+RS+K+DHYV+DT EI+YYQ+DPQLS S
Sbjct: 420  LVRSLKKDHYVNDTDEIVYYQSDPQLSGS 448


>emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]
          Length = 452

 Score =  741 bits (1913), Expect = 0.0
 Identities = 350/449 (77%), Positives = 384/449 (85%), Gaps = 7/449 (1%)
 Frame = -2

Query: 1583 MASWVLSECGIRPLPQNLYQPRTRF--NANNNGYKVKLSVSRINDVGRKNLSLIGC-RSR 1413
            MASWVLSECGIRPLPQ   +PRT    N+ NN  +++   S  +    K    IGC + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1412 DWCLKVSAPLKVATLDGEGGG----MRNGVEEKVEFDPSLPPPFGIADIRASIPKHCWVK 1245
            +W LKVSAPL+V   + E  G      NGVEE+ EFDP  PPPF +ADIRA+IPKHCWVK
Sbjct: 61   NWALKVSAPLRVXYGEEEERGEIINRVNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVK 120

Query: 1244 DPWKSMSYVFRDVVIVFGLAAAAAYFNSWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 1065
            DPW+SMSYV RDVV+V GLAAAAAY N+W+VWPLYWAAQGTMFWALFVLGHDCGHGSFSN
Sbjct: 121  DPWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 180

Query: 1064 DHKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPVSESLFNKMDFITRK 885
            +  LNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVE DESWHP+ E ++  +D +TR 
Sbjct: 181  NPTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRM 240

Query: 884  LRFTVPFPMLAYPFYLWGRSPGKKGSHFNPSSDLFVPSERKDVITSTTCWTAMAALLVGL 705
            LRFTVPFPMLAYPFYLW RSPGK GSHF+PSSDLFVPSERK+VITST CWTAMAALLVGL
Sbjct: 241  LRFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGL 300

Query: 704  SFVAGPIQMLKLYGGPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRD 525
            SFV GPIQMLKLYG PYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRD
Sbjct: 301  SFVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRD 360

Query: 524  YGIINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRVPKKSEGPLPFHLIGS 345
            YG INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYR PK S GPLPFHLIGS
Sbjct: 361  YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGS-GPLPFHLIGS 419

Query: 344  LIRSMKQDHYVSDTGEILYYQADPQLSES 258
            L+RS+K+DHYV+DT EI+YYQ+DPQLS S
Sbjct: 420  LVRSLKKDHYVNDTDEIVYYQSDPQLSGS 448


>emb|CBI22803.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  740 bits (1911), Expect = 0.0
 Identities = 348/445 (78%), Positives = 381/445 (85%), Gaps = 3/445 (0%)
 Frame = -2

Query: 1583 MASWVLSECGIRPLPQNLYQPRTRF--NANNNGYKVKLSVSRINDVGRKNLSLIGC-RSR 1413
            MASWVLSECGIRPLPQ   +PRT    N+ NN  +++   S  +    K    IGC + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1412 DWCLKVSAPLKVATLDGEGGGMRNGVEEKVEFDPSLPPPFGIADIRASIPKHCWVKDPWK 1233
            +W LKVSAPL+V           NGVEE+ EFDP  PPPF +ADIRA+IPKHCWVKDPW+
Sbjct: 61   NWALKVSAPLRVEV---------NGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVKDPWR 111

Query: 1232 SMSYVFRDVVIVFGLAAAAAYFNSWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKL 1053
            SMSYV RDVV+V GLAAAAAY N+W+VWPLYWAAQGTMFWALFVLGHDCGHGSFSN+  L
Sbjct: 112  SMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPTL 171

Query: 1052 NSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPVSESLFNKMDFITRKLRFT 873
            NSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVE DESWHP+ E ++  +D +TR LRFT
Sbjct: 172  NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRMLRFT 231

Query: 872  VPFPMLAYPFYLWGRSPGKKGSHFNPSSDLFVPSERKDVITSTTCWTAMAALLVGLSFVA 693
            VPFPMLAYPFYLW RSPGK GSHF+PSSDLFVPSERK+VITST CWTAMAALLVGLSFV 
Sbjct: 232  VPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGLSFVM 291

Query: 692  GPIQMLKLYGGPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGII 513
            GPIQMLKLYG PYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRDYG I
Sbjct: 292  GPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRDYGWI 351

Query: 512  NNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRVPKKSEGPLPFHLIGSLIRS 333
            NNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYR PK S GPLPFHLIGSL+RS
Sbjct: 352  NNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGS-GPLPFHLIGSLVRS 410

Query: 332  MKQDHYVSDTGEILYYQADPQLSES 258
            +K+DHYV+DT EI+YYQ+DPQLS S
Sbjct: 411  LKKDHYVNDTDEIVYYQSDPQLSGS 435


>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
          Length = 457

 Score =  729 bits (1881), Expect = 0.0
 Identities = 344/456 (75%), Positives = 379/456 (83%), Gaps = 14/456 (3%)
 Frame = -2

Query: 1583 MASWVLSECGIRPLPQNLYQPRTRFNANNNGYKVKLSVSRINDVGRKNLSLIG--CRSRD 1410
            MASWVLSECG+ PLP    +PRT  N +   +    S   I D+   ++   G   R R+
Sbjct: 1    MASWVLSECGLTPLPHIFPRPRTGINPSKARFLH--SKKSITDLKLPSVKCSGDFSRDRN 58

Query: 1409 WCLKVSAPLKVATLDGE----------GGGMRNGVEEKV--EFDPSLPPPFGIADIRASI 1266
            W LKVSAPL+VA L+GE          G G   GVEE+   EFDP  PPPF +ADIRA+I
Sbjct: 59   WGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAI 118

Query: 1265 PKHCWVKDPWKSMSYVFRDVVIVFGLAAAAAYFNSWIVWPLYWAAQGTMFWALFVLGHDC 1086
            PKHCWVKDPWKSMSYV RDVV+VFGLAAAAAY N+W+VWPLYWAAQGTMFWALFVLGHDC
Sbjct: 119  PKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDC 178

Query: 1085 GHGSFSNDHKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPVSESLFNK 906
            GHGSFSNDHKLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVE DESWHP+SE +F  
Sbjct: 179  GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFRT 238

Query: 905  MDFITRKLRFTVPFPMLAYPFYLWGRSPGKKGSHFNPSSDLFVPSERKDVITSTTCWTAM 726
            +D  TR LRF +PFP+LAYPFYLW RSPGK GSHF+P+SDLFVPSERKDVITST CWTAM
Sbjct: 239  LDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAM 298

Query: 725  AALLVGLSFVAGPIQMLKLYGGPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGG 546
            AALLVGLSFV GP+Q+LKLYG PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGG
Sbjct: 299  AALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG 358

Query: 545  LTTLDRDYGIINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRVPKKSEGPL 366
            LTTLDRDYG  NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYR PKKS GP+
Sbjct: 359  LTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKS-GPI 417

Query: 365  PFHLIGSLIRSMKQDHYVSDTGEILYYQADPQLSES 258
            PF+L G LIRSM +DHYVSD G+++YYQ DPQL+ S
Sbjct: 418  PFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGS 453


>dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum]
            gi|21668486|dbj|BAC01274.1| plastid omega-3 fatty acid
            desaturase [Nicotiana tabacum]
          Length = 441

 Score =  719 bits (1855), Expect = 0.0
 Identities = 334/441 (75%), Positives = 379/441 (85%), Gaps = 1/441 (0%)
 Frame = -2

Query: 1583 MASWVLSECGIRPLPQNLYQPRTRFNANNNGYKVKLSVSRINDVGRKNLSLIGC-RSRDW 1407
            MASWVLSECG+RPLP+   +PRT    + + + +KL +SR  D+    +SL    + R+W
Sbjct: 1    MASWVLSECGLRPLPRIYPKPRTGAATSASSH-IKLRISR-TDLSGSAISLSNTNKERNW 58

Query: 1406 CLKVSAPLKVATLDGEGGGMRNGVEEKVEFDPSLPPPFGIADIRASIPKHCWVKDPWKSM 1227
             L+VSAPL++ T+ GE    R        FDP  PPPF ++DI+A+IPKHCWVK+PWKSM
Sbjct: 59   ALRVSAPLRIQTV-GEEESERTNNSGGEFFDPGAPPPFKLSDIKAAIPKHCWVKNPWKSM 117

Query: 1226 SYVFRDVVIVFGLAAAAAYFNSWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNS 1047
            SYV RDV IVFGLAAAAAYFN+W+VWPLYW AQ TMFWALFVLGHDCGHGSFSN+HKLNS
Sbjct: 118  SYVVRDVAIVFGLAAAAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNNHKLNS 177

Query: 1046 VVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPVSESLFNKMDFITRKLRFTVP 867
            VVGHILHSSILVPYHGWRISHRTHHQNHGHVE DESWHP+ E ++N +D  T+KLRFT+P
Sbjct: 178  VVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPIPEKIYNSLDLATKKLRFTLP 237

Query: 866  FPMLAYPFYLWGRSPGKKGSHFNPSSDLFVPSERKDVITSTTCWTAMAALLVGLSFVAGP 687
            FP+LAYPFYLW RSPGKKGSHF+P+SDLFVPSE+KDV+TST CWTAMAALLVGLSFV GP
Sbjct: 238  FPLLAYPFYLWSRSPGKKGSHFDPNSDLFVPSEKKDVMTSTLCWTAMAALLVGLSFVMGP 297

Query: 686  IQMLKLYGGPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGIINN 507
             Q+LKLYG PYW FVMWLD VTYLHHHGH+DKLPWYRG+EWSYLRGGLTTLDRDYG INN
Sbjct: 298  FQVLKLYGIPYWGFVMWLDLVTYLHHHGHDDKLPWYRGEEWSYLRGGLTTLDRDYGWINN 357

Query: 506  IHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRVPKKSEGPLPFHLIGSLIRSMK 327
            IHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYY+ PKKS GPLPF+L+G LI+SMK
Sbjct: 358  IHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPKKS-GPLPFYLLGVLIKSMK 416

Query: 326  QDHYVSDTGEILYYQADPQLS 264
            QDHYVSDTG+I+YY+ DPQLS
Sbjct: 417  QDHYVSDTGDIVYYRTDPQLS 437