BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004401
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   448   e-123
gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]     447   e-123
ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus c...   439   e-121
ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyr...   436   e-120
gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like...   435   e-119

>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
            2, mitochondrial-like [Cucumis sativus]
            gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
            dehydrogenase [ubiquinone] iron-sulfur subunit 2,
            mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  448 bits (1152), Expect = e-123
 Identities = 217/279 (77%), Positives = 238/279 (85%), Gaps = 9/279 (3%)
 Frame = -1

Query: 1129 ATNLFRRTITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPDSP 977
            AT + RR ++R S  AS+  R  +IR +ASE    Q          LKTF+IYRWNPDSP
Sbjct: 2    ATGILRRALSRVS--ASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSP 59

Query: 976  SKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLAC 797
            SKP+LQ+Y++DLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNI+GCNGLAC
Sbjct: 60   SKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC 119

Query: 796  LTKIEADNSKTMISPLPHMFVVKDLVVDMTNFYNQYKSIEPWLKRKTEGSVDGKEILQSK 617
            LTKI + +S T I+PLPHMFV+KDLVVDMTNFYNQYKSIEPWLKRK+E  V GKEILQSK
Sbjct: 120  LTKISSGDSST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSK 178

Query: 616  KDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPATLLHAHRWISDSRDEYTTERLDAI 437
            KDRAKLDGMYECILCACCSTSCPSYWWNPE YLGPA LLHA+RWISDSRDEYT ERLDAI
Sbjct: 179  KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAI 238

Query: 436  NDEFKLYRCHTILNCASACPKGLNPGKQIQAIKAKEQWG 320
            NDEFKLYRCHTILNCA ACPKGLNPGKQIQ IK  +  G
Sbjct: 239  NDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQLVG 277


>gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
          Length = 277

 Score =  447 bits (1150), Expect = e-123
 Identities = 216/279 (77%), Positives = 239/279 (85%), Gaps = 9/279 (3%)
 Frame = -1

Query: 1129 ATNLFRRTITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPDSP 977
            AT + RR ++R S  AS+  R  +IR +ASE    Q          LKTF+IYRWNPDSP
Sbjct: 2    ATGILRRVLSRVS--ASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSP 59

Query: 976  SKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLAC 797
            SKP+LQ+Y++DLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNI+GCNGLAC
Sbjct: 60   SKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC 119

Query: 796  LTKIEADNSKTMISPLPHMFVVKDLVVDMTNFYNQYKSIEPWLKRKTEGSVDGKEILQSK 617
            LTKI + +S T I+PLPHMFV+KDLVVDMTNFYNQYKSIEPWLKRK+E  V GKEILQSK
Sbjct: 120  LTKIPSGDSST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSK 178

Query: 616  KDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPATLLHAHRWISDSRDEYTTERLDAI 437
            KDRAKLDGMYECILCACCSTSCPSYWWNPE YLGPA LLHA+RWISDSRDEYT ERL+AI
Sbjct: 179  KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI 238

Query: 436  NDEFKLYRCHTILNCASACPKGLNPGKQIQAIKAKEQWG 320
            NDEFKLYRCHTILNCA ACPKGLNPGKQIQ IK+ +  G
Sbjct: 239  NDEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277


>ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223533696|gb|EEF35431.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 284

 Score =  439 bits (1128), Expect = e-121
 Identities = 212/281 (75%), Positives = 230/281 (81%), Gaps = 11/281 (3%)
 Frame = -1

Query: 1129 ATNLFRR--TITRYSTPASNSLRHHQIRLYASETPTNQ---------KLKTFSIYRWNPD 983
            AT L R+  +I R S  A  + R    R +ASE    +          LKTF IYRWNPD
Sbjct: 2    ATGLLRKGLSIARVSKTAPFTSRLIPTRFHASEAEAQKVEPKASSTASLKTFQIYRWNPD 61

Query: 982  SPSKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGL 803
            +PSKP LQDY++DLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNI+GCNGL
Sbjct: 62   NPSKPTLQDYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 121

Query: 802  ACLTKIEADNSKTMISPLPHMFVVKDLVVDMTNFYNQYKSIEPWLKRKTEGSVDGKEILQ 623
            ACLTKI + ++ + I+PLPHMFV+KDLVVDMTNFYNQYKSIEPWLKRK    VDGKEI Q
Sbjct: 122  ACLTKISSGSTSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPVDGKEIPQ 181

Query: 622  SKKDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPATLLHAHRWISDSRDEYTTERLD 443
            SKKDRAKLDGMYECILCACCSTSCPSYWWNPE YLGPA LLHA+RWISDSRDEYT ERLD
Sbjct: 182  SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTNERLD 241

Query: 442  AINDEFKLYRCHTILNCASACPKGLNPGKQIQAIKAKEQWG 320
            AINDEFKLYRCHTILNCA ACPKGLNPGKQI  IK  +  G
Sbjct: 242  AINDEFKLYRCHTILNCARACPKGLNPGKQIMHIKQLQMVG 282


>ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata]
            gi|297316524|gb|EFH46947.1| succinate dehydrogenase 2-2
            [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  436 bits (1120), Expect = e-120
 Identities = 199/233 (85%), Positives = 215/233 (92%)
 Frame = -1

Query: 1018 LKTFSIYRWNPDSPSKPQLQDYQVDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 839
            LKTF IYRWNPD+P KP+LQDYQ+DLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICG
Sbjct: 48   LKTFQIYRWNPDNPGKPELQDYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 107

Query: 838  SCAMNIEGCNGLACLTKIEADNSKTMISPLPHMFVVKDLVVDMTNFYNQYKSIEPWLKRK 659
            SCAMNI+GCNGLACLTKIE+ + +T I+PLPHMFV+KDLVVDMTNFYNQYKSIEPWLKRK
Sbjct: 108  SCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK 167

Query: 658  TEGSVDGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPEKYLGPATLLHAHRWIS 479
               SV GKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPE YLGPA LLHA+RWIS
Sbjct: 168  NPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIS 227

Query: 478  DSRDEYTTERLDAINDEFKLYRCHTILNCASACPKGLNPGKQIQAIKAKEQWG 320
            DSRDEYT ERL+AI+DEFKLYRCHTILNCA ACPKGLNPGKQI  IK  ++ G
Sbjct: 228  DSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280


>gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like [Arabidopsis
            thaliana]
          Length = 280

 Score =  435 bits (1118), Expect = e-119
 Identities = 202/256 (78%), Positives = 223/256 (87%)
 Frame = -1

Query: 1087 PASNSLRHHQIRLYASETPTNQKLKTFSIYRWNPDSPSKPQLQDYQVDLKDCGPMVLDAL 908
            PA  + +  + +  AS       LKTF IYRWNPD+P KP+LQDY++DLKDCGPMVLDAL
Sbjct: 25   PARWTSKGSEAQSKASTGGGGASLKTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDAL 84

Query: 907  IKIKNEIDPTLTFRRSCREGICGSCAMNIEGCNGLACLTKIEADNSKTMISPLPHMFVVK 728
            IKIKNE+DP+LTFRRSCREGICGSCAMNI+GCNGLACLTKIE+ + +T I+PLPHMFV+K
Sbjct: 85   IKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIK 144

Query: 727  DLVVDMTNFYNQYKSIEPWLKRKTEGSVDGKEILQSKKDRAKLDGMYECILCACCSTSCP 548
            DLVVDMTNFYNQYKSIEPWLKRK   SV GKEILQSKKDRAKLDGMYECILCACCSTSCP
Sbjct: 145  DLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCP 204

Query: 547  SYWWNPEKYLGPATLLHAHRWISDSRDEYTTERLDAINDEFKLYRCHTILNCASACPKGL 368
            SYWWNPE YLGPA LLHA+RWISDSRDEYT ERL+AI+DEFKLYRCHTILNCA ACPKGL
Sbjct: 205  SYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGL 264

Query: 367  NPGKQIQAIKAKEQWG 320
            NPGKQI  IK  ++ G
Sbjct: 265  NPGKQITHIKQLQKSG 280