BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004397
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   311   6e-97
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   304   9e-96
ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycin...   306   1e-95
gb|ACU18529.1| unknown [Glycine max]                                  304   7e-95
ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23...   300   5e-94

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
            gi|297737829|emb|CBI27030.3| unnamed protein product
            [Vitis vinifera]
          Length = 397

 Score =  311 bits (798), Expect(2) = 6e-97
 Identities = 161/201 (80%), Positives = 171/201 (85%)
 Frame = -3

Query: 1110 QRELEYLYSGIPEQAEVPPVIRXXXXXXXXXXXXXXXXXXXXXPVPSSGPNANPLDLFPQ 931
            +R +EYLYSGIPEQAEVPPV R                       PSSGPNANPLDLFPQ
Sbjct: 201  ERAVEYLYSGIPEQAEVPPVARAPASGQAANPPAQSQQPVP---APSSGPNANPLDLFPQ 257

Query: 930  GLPNVGSNAAGAGTLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQ 751
            G+PNVGSN AGAGTL+FLRNSQQFQALR MVQANPQILQPMLQELGKQNP LMRLIQEHQ
Sbjct: 258  GIPNVGSNPAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQ 317

Query: 750  ADFLRLINEPVEGGAEGNVLGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFA 571
            ADFLRLINEPVEGG EGN+LGQLAAAMPQ+VTVTPEEREAI RLEAMGFDRA+VLEVFFA
Sbjct: 318  ADFLRLINEPVEGG-EGNILGQLAAAMPQAVTVTPEEREAIARLEAMGFDRALVLEVFFA 376

Query: 570  CNKNEELAANYLLDHINEFEE 508
            CNKNEELAANYLLDH++EFE+
Sbjct: 377  CNKNEELAANYLLDHMHEFED 397



 Score = 70.5 bits (171), Expect(2) = 6e-97
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = -2

Query: 1213 GNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERARIFIF 1085
            GNN E  IQQILDMGGGTWDRD V RALRAAYNNPERA  +++
Sbjct: 166  GNNFEEAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLY 208


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223531394|gb|EEF33228.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 409

 Score =  304 bits (779), Expect(2) = 9e-96
 Identities = 157/205 (76%), Positives = 169/205 (82%), Gaps = 4/205 (1%)
 Frame = -3

Query: 1110 QRELEYLYSGIPEQAEVPPVIRXXXXXXXXXXXXXXXXXXXXXPVPSSGPNANPLDLFPQ 931
            +R +EYLYSGIPEQAEVPPV                        VPS GPNANPLDLFPQ
Sbjct: 206  ERAVEYLYSGIPEQAEVPPVAPVSLSGQAANQPAQPQQPAQPAAVPSGGPNANPLDLFPQ 265

Query: 930  GLPNVGSNAAGAG----TLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLI 763
            GLPN+GS  AGAG    TL+FLRNSQQFQALR MVQANPQILQPMLQELGKQNPNL+RLI
Sbjct: 266  GLPNMGSGGAGAGAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLI 325

Query: 762  QEHQADFLRLINEPVEGGAEGNVLGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLE 583
            QEHQ DFLRLINEPVEGG EGN++GQLAAAMPQ+VTVTPEEREAIERLEAMGFDR +VLE
Sbjct: 326  QEHQTDFLRLINEPVEGG-EGNIMGQLAAAMPQAVTVTPEEREAIERLEAMGFDRGLVLE 384

Query: 582  VFFACNKNEELAANYLLDHINEFEE 508
            VFFACNKNEELAANYLLDH++EFE+
Sbjct: 385  VFFACNKNEELAANYLLDHMHEFED 409



 Score = 73.9 bits (180), Expect(2) = 9e-96
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = -2

Query: 1213 GNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERARIFIF 1085
            GNN EG IQQILDMGGGTWDRD V RALRAAYNNPERA  +++
Sbjct: 171  GNNLEGAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLY 213


>ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycine max]
            gi|255641670|gb|ACU21107.1| unknown [Glycine max]
          Length = 400

 Score =  306 bits (785), Expect(2) = 1e-95
 Identities = 156/201 (77%), Positives = 168/201 (83%)
 Frame = -3

Query: 1110 QRELEYLYSGIPEQAEVPPVIRXXXXXXXXXXXXXXXXXXXXXPVPSSGPNANPLDLFPQ 931
            +R +EYLYSGIPEQAE PPV                        VPSSGPNANPLDLFPQ
Sbjct: 201  ERAVEYLYSGIPEQAEAPPVTGVPASAQPSNPPADTPQAAQPASVPSSGPNANPLDLFPQ 260

Query: 930  GLPNVGSNAAGAGTLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQ 751
            GLPNVGS AAGAG+L+FLRNSQQFQALR MVQANPQILQPMLQELGKQNP+LMRLIQEHQ
Sbjct: 261  GLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQ 320

Query: 750  ADFLRLINEPVEGGAEGNVLGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFA 571
             DFLRLINEPVEGG EGN+LGQLA  MPQ+VTVTPEER+AIERLEAMGFDRA VLEV+FA
Sbjct: 321  VDFLRLINEPVEGG-EGNILGQLAGTMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFA 379

Query: 570  CNKNEELAANYLLDHINEFEE 508
            CNKNEELAANYLLDH++EF+E
Sbjct: 380  CNKNEELAANYLLDHMHEFDE 400



 Score = 70.9 bits (172), Expect(2) = 1e-95
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = -2

Query: 1213 GNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERARIFIF 1085
            G+N EGTIQQILDMGGG+WDRD V R LRAAYNNPERA  +++
Sbjct: 166  GSNLEGTIQQILDMGGGSWDRDTVVRTLRAAYNNPERAVEYLY 208


>gb|ACU18529.1| unknown [Glycine max]
          Length = 382

 Score =  304 bits (779), Expect(2) = 7e-95
 Identities = 156/201 (77%), Positives = 168/201 (83%)
 Frame = -3

Query: 1110 QRELEYLYSGIPEQAEVPPVIRXXXXXXXXXXXXXXXXXXXXXPVPSSGPNANPLDLFPQ 931
            +R +EYLYSGIPEQAE  PV                        VPSSGPNANPLDLFPQ
Sbjct: 183  ERAVEYLYSGIPEQAEALPVTGVPASAQPSNPPADTPQAAQPASVPSSGPNANPLDLFPQ 242

Query: 930  GLPNVGSNAAGAGTLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQ 751
            GLPNVGS AAGAG+L+FLRNSQQFQALR MVQANPQILQPMLQELGKQNP+LMRLIQEHQ
Sbjct: 243  GLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQ 302

Query: 750  ADFLRLINEPVEGGAEGNVLGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFA 571
             DFLRLINEPVEGG EGN+LGQLA AMPQ+VTVTPEER+AIERLEAMGFDRA VLEV+FA
Sbjct: 303  VDFLRLINEPVEGG-EGNILGQLAGAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFA 361

Query: 570  CNKNEELAANYLLDHINEFEE 508
            CNKNEELAANYLLDH++EF+E
Sbjct: 362  CNKNEELAANYLLDHMHEFDE 382



 Score = 70.9 bits (172), Expect(2) = 7e-95
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = -2

Query: 1213 GNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERARIFIF 1085
            G+N EGTIQQILDMGGG+WDRD V R LRAAYNNPERA  +++
Sbjct: 148  GSNLEGTIQQILDMGGGSWDRDTVVRTLRAAYNNPERAVEYLY 190


>ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
            [Glycine max]
          Length = 402

 Score =  300 bits (768), Expect(2) = 5e-94
 Identities = 152/201 (75%), Positives = 169/201 (84%)
 Frame = -3

Query: 1110 QRELEYLYSGIPEQAEVPPVIRXXXXXXXXXXXXXXXXXXXXXPVPSSGPNANPLDLFPQ 931
            +R +EYLY+GIPEQAE P V R                      V S+GPNANPLDLFPQ
Sbjct: 202  ERAVEYLYTGIPEQAEAPLVARAPVSAQPTNPPADAPQTAQPAAVTSAGPNANPLDLFPQ 261

Query: 930  GLPNVGSNAAGAGTLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQ 751
            GLPNVGS AAGAG+L+FLRNSQQFQALR MVQANPQILQPMLQELGKQNP+LMRLI++HQ
Sbjct: 262  GLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQ 321

Query: 750  ADFLRLINEPVEGGAEGNVLGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFA 571
            ADFLRLINEP EGG EGN+LGQ+A+ MPQ+VTVTPEER+AIERLEAMGFDRAIVLEV+FA
Sbjct: 322  ADFLRLINEPAEGG-EGNILGQMASGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFA 380

Query: 570  CNKNEELAANYLLDHINEFEE 508
            CNKNEELAANYLLDH++EFEE
Sbjct: 381  CNKNEELAANYLLDHMHEFEE 401



 Score = 72.4 bits (176), Expect(2) = 5e-94
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = -2

Query: 1213 GNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERARIFIF 1085
            G+N EGTIQQILDMGGG+WDRD V RALRAAYNNPERA  +++
Sbjct: 167  GSNLEGTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLY 209