BLASTX nr result

ID: Coptis21_contig00004396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004396
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21656.3| unnamed protein product [Vitis vinifera]              284   5e-74
emb|CAH67201.1| OSIGBa0152K17.13 [Oryza sativa Indica Group]          240   8e-61
emb|CAD40870.2| OSJNBa0064H22.13 [Oryza sativa Japonica Group] g...   240   8e-61
ref|XP_003581288.1| PREDICTED: F-box protein FBW2-like [Brachypo...   222   2e-55
gb|EAY94316.1| hypothetical protein OsI_16083 [Oryza sativa Indi...   196   1e-47

>emb|CBI21656.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  284 bits (726), Expect = 5e-74
 Identities = 137/238 (57%), Positives = 176/238 (73%)
 Frame = -1

Query: 1132 PEVLALIFTRNPIDEIIRSVPFVCKSWREVVAGSYCWNEIDIERWCRRCNRSDLIDVVVR 953
            PE+LALI  R P++E+++++P VCKSW   VAG YCW+ ID+E WCRR +R D +D +VR
Sbjct: 22   PEILALILVRIPVEELLQTIPLVCKSWWSAVAGPYCWSNIDVEDWCRRWSRFDRVDSLVR 81

Query: 952  KLMRRSSGNCRKLSAYKIGDAGFAFVANCGRCLKVLQMPMSDVTDKIVKKHAESLKLLTF 773
            KL+RRS G CR+LSAY++GD GFAF AN  RCLKVLQ+PMS+V+DK+V+KHA  +  LT 
Sbjct: 82   KLVRRSRGMCRRLSAYRLGDPGFAFAANWVRCLKVLQIPMSEVSDKMVEKHA--VATLTV 139

Query: 772  LDISYCVKITCQGIEAFGKYCTSLVHLRRNMPLPEWQHDTGSLNSQTDDGEALVIADTMP 593
            LDISYC++IT +G+EA GK C  L+ L+RNMP P    +T     + DDGEA+ IA+TMP
Sbjct: 140  LDISYCLRITSKGLEAVGKSCKFLIQLKRNMP-PLELEETEKRAKKMDDGEAMAIANTMP 198

Query: 592  VLRNLELGYGRFTDVGLDAILAKCMKLTHLDIIGCYGVKMEGDFEEKCDRLEVFKAPW 419
             L  LEL YGRF D GL+AIL  C  LTHLDI GC  V++ GD E++C +L  FK PW
Sbjct: 199  GLNRLELAYGRFGDHGLNAILTNCKALTHLDIEGCLYVELNGDLEQRCGQLMDFKPPW 256


>emb|CAH67201.1| OSIGBa0152K17.13 [Oryza sativa Indica Group]
          Length = 274

 Score =  240 bits (612), Expect = 8e-61
 Identities = 120/239 (50%), Positives = 161/239 (67%), Gaps = 1/239 (0%)
 Frame = -1

Query: 1132 PEVLALIFT-RNPIDEIIRSVPFVCKSWREVVAGSYCWNEIDIERWCRRCNRSDLIDVVV 956
            PE+LALI   R   DE+ R    VC++WRE  A    W ++DIE WCRR N     D  V
Sbjct: 12   PEILALILRGRVDADEVARGAARVCRAWREAAAAPDVWGDVDIEAWCRRVNCRPRADAAV 71

Query: 955  RKLMRRSSGNCRKLSAYKIGDAGFAFVANCGRCLKVLQMPMSDVTDKIVKKHAESLKLLT 776
            R+L+  + G  R+LSAY++GDA  A+VA  G+ L VLQ+PMS+++D+ VKK+AE L  L 
Sbjct: 72   RRLVALARGTLRQLSAYRVGDAALAYVAASGKLLNVLQIPMSEISDQAVKKYAEFLPALR 131

Query: 775  FLDISYCVKITCQGIEAFGKYCTSLVHLRRNMPLPEWQHDTGSLNSQTDDGEALVIADTM 596
             LDIS C+KI+  GIEA G++C  LV L+RNMP P+  H   ++ +  +D EAL IA+TM
Sbjct: 132  VLDISNCLKISSSGIEALGRHCKLLVQLKRNMPPPDVPHGYNAVPNVVND-EALAIANTM 190

Query: 595  PVLRNLELGYGRFTDVGLDAILAKCMKLTHLDIIGCYGVKMEGDFEEKCDRLEVFKAPW 419
            PVL +LEL YG F+D GL AIL +C +L  LDI+GC+ V++EGD E +C  LE F+ PW
Sbjct: 191  PVLEHLELAYGLFSDTGLGAILTRCPRLQTLDILGCWNVRLEGDIELRCCALESFREPW 249


>emb|CAD40870.2| OSJNBa0064H22.13 [Oryza sativa Japonica Group]
            gi|116310066|emb|CAH67087.1| H0818E04.4 [Oryza sativa
            Indica Group] gi|125590546|gb|EAZ30896.1| hypothetical
            protein OsJ_14971 [Oryza sativa Japonica Group]
          Length = 413

 Score =  240 bits (612), Expect = 8e-61
 Identities = 120/239 (50%), Positives = 161/239 (67%), Gaps = 1/239 (0%)
 Frame = -1

Query: 1132 PEVLALIFT-RNPIDEIIRSVPFVCKSWREVVAGSYCWNEIDIERWCRRCNRSDLIDVVV 956
            PE+LALI   R   DE+ R    VC++WRE  A    W ++DIE WCRR N     D  V
Sbjct: 151  PEILALILRGRVDADEVARGAARVCRAWREAAAAPDVWGDVDIEAWCRRVNCRPRADAAV 210

Query: 955  RKLMRRSSGNCRKLSAYKIGDAGFAFVANCGRCLKVLQMPMSDVTDKIVKKHAESLKLLT 776
            R+L+  + G  R+LSAY++GDA  A+VA  G+ L VLQ+PMS+++D+ VKK+AE L  L 
Sbjct: 211  RRLVALARGTLRQLSAYRVGDAALAYVAASGKLLNVLQIPMSEISDQAVKKYAEFLPALR 270

Query: 775  FLDISYCVKITCQGIEAFGKYCTSLVHLRRNMPLPEWQHDTGSLNSQTDDGEALVIADTM 596
             LDIS C+KI+  GIEA G++C  LV L+RNMP P+  H   ++ +  +D EAL IA+TM
Sbjct: 271  VLDISNCLKISSSGIEALGRHCKLLVQLKRNMPPPDVPHGYNAVPNVVND-EALAIANTM 329

Query: 595  PVLRNLELGYGRFTDVGLDAILAKCMKLTHLDIIGCYGVKMEGDFEEKCDRLEVFKAPW 419
            PVL +LEL YG F+D GL AIL +C +L  LDI+GC+ V++EGD E +C  LE F+ PW
Sbjct: 330  PVLEHLELAYGLFSDTGLGAILTRCPRLQTLDILGCWNVRLEGDIELRCCALESFREPW 388


>ref|XP_003581288.1| PREDICTED: F-box protein FBW2-like [Brachypodium distachyon]
          Length = 268

 Score =  222 bits (565), Expect = 2e-55
 Identities = 115/239 (48%), Positives = 157/239 (65%), Gaps = 1/239 (0%)
 Frame = -1

Query: 1132 PEVLALIFT-RNPIDEIIRSVPFVCKSWREVVAGSYCWNEIDIERWCRRCNRSDLIDVVV 956
            PE+LAL+   R   D+I R    VC++WR+  A    W ++DIE WCRR N     D  V
Sbjct: 12   PEILALVLRGRLAADDIARGAVAVCRAWRDATAAPDMWGDVDIEAWCRRVNCRVRADAAV 71

Query: 955  RKLMRRSSGNCRKLSAYKIGDAGFAFVANCGRCLKVLQMPMSDVTDKIVKKHAESLKLLT 776
            R+L+ R+ G  R+LSAY++GDA  A+VA  G+ L VLQ+PMS+++D+ V+K+AE L  L 
Sbjct: 72   RRLVARAQGTLRRLSAYRVGDASLAYVATSGKLLNVLQVPMSEISDQAVEKYAECLPALR 131

Query: 775  FLDISYCVKITCQGIEAFGKYCTSLVHLRRNMPLPEWQHDTGSLNSQTDDGEALVIADTM 596
             LDIS C+KIT +G+EA G+ C SLV L+RNMP P+  +    +     + EAL +A+TM
Sbjct: 132  GLDISNCLKITSKGMEALGRNCKSLVQLKRNMP-PQGNNAAPGV----VEDEALAVANTM 186

Query: 595  PVLRNLELGYGRFTDVGLDAILAKCMKLTHLDIIGCYGVKMEGDFEEKCDRLEVFKAPW 419
            P+L+ LEL YG F+DVGL AIL KC  L  L+I+G   V++EGD EE    LE F+ PW
Sbjct: 187  PMLKQLELAYGLFSDVGLGAILTKCPLLQTLNILGSLNVRLEGDIEENFCALESFRDPW 245


>gb|EAY94316.1| hypothetical protein OsI_16083 [Oryza sativa Indica Group]
          Length = 272

 Score =  196 bits (499), Expect = 1e-47
 Identities = 99/194 (51%), Positives = 134/194 (69%)
 Frame = -1

Query: 1000 WCRRCNRSDLIDVVVRKLMRRSSGNCRKLSAYKIGDAGFAFVANCGRCLKVLQMPMSDVT 821
            W RR       D  VR+L+  + G  R+LSAY++GDA  A+VA  G+ L VLQ+PMS+++
Sbjct: 61   WMRRA------DAAVRRLVALARGTLRQLSAYRVGDAALAYVAASGKLLNVLQIPMSEIS 114

Query: 820  DKIVKKHAESLKLLTFLDISYCVKITCQGIEAFGKYCTSLVHLRRNMPLPEWQHDTGSLN 641
            D+ VKK+AE L  L  LDIS C+KI+  GIEA G++C  LV L+RNMP P+  H   ++ 
Sbjct: 115  DQAVKKYAECLPALRVLDISNCLKISSSGIEALGRHCKLLVQLKRNMPPPDVPHGYNTVP 174

Query: 640  SQTDDGEALVIADTMPVLRNLELGYGRFTDVGLDAILAKCMKLTHLDIIGCYGVKMEGDF 461
            +  +D EAL IA+TMPVL +LEL YG F+D GL AIL +C +L  LDI+GC+ V++EGD 
Sbjct: 175  NVVND-EALAIANTMPVLEHLELAYGLFSDTGLGAILTRCPRLQTLDILGCWNVRLEGDI 233

Query: 460  EEKCDRLEVFKAPW 419
            EE+C  LE F+ PW
Sbjct: 234  EERCCALESFREPW 247


Top