BLASTX nr result

ID: Coptis21_contig00004394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004394
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511509.1| nitrate transporter, putative [Ricinus commu...   110   4e-22
ref|XP_002270558.2| PREDICTED: probable peptide/nitrate transpor...    99   2e-18
emb|CBI15285.3| unnamed protein product [Vitis vinifera]               96   8e-18
ref|XP_002266777.1| PREDICTED: probable peptide/nitrate transpor...    96   8e-18
ref|NP_001237970.1| nitrate transporter NRT1-2 [Glycine max] gi|...    96   1e-17

>ref|XP_002511509.1| nitrate transporter, putative [Ricinus communis]
           gi|223550624|gb|EEF52111.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 602

 Score =  110 bits (275), Expect = 4e-22
 Identities = 46/76 (60%), Positives = 62/76 (81%)
 Frame = -3

Query: 847 LVTIVHRTTAHSPSGNWLPEDLNKGRLEFFYHMFAGLGILNFGYFLICARWYRYKGSGGV 668
           L+T+VHRTT  + +GNWL EDLNKGRL+++Y++ A LG+LNFGYFLICA+WY+YKG G  
Sbjct: 527 LITVVHRTTEKTATGNWLAEDLNKGRLDYYYYLIAALGVLNFGYFLICAKWYKYKG-GNA 585

Query: 667 VTIEMAKDSNQNGKHI 620
           VTIEM ++   + KH+
Sbjct: 586 VTIEMTREKKPSEKHV 601


>ref|XP_002270558.2| PREDICTED: probable peptide/nitrate transporter At5g62680-like
           [Vitis vinifera]
          Length = 577

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 40/57 (70%), Positives = 51/57 (89%)
 Frame = -3

Query: 847 LVTIVHRTTAHSPSGNWLPEDLNKGRLEFFYHMFAGLGILNFGYFLICARWYRYKGS 677
           LV+IVHRTTA + +GNWLPEDLNKGRL++FY++ A LG++N GYFL+CA+WY YKGS
Sbjct: 516 LVSIVHRTTAGAKTGNWLPEDLNKGRLDYFYYLVASLGVINLGYFLVCAKWYTYKGS 572


>emb|CBI15285.3| unnamed protein product [Vitis vinifera]
          Length = 1053

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = -3

Query: 847 LVTIVHRTTAHSPSGNWLPEDLNKGRLEFFYHMFAGLGILNFGYFLICARWYRYKGS 677
           LV+ VHR TA + SGNWLPEDLNKGRL++FY++ A LG++N GYFL+CA+WY+YKGS
Sbjct: 543 LVSTVHRMTAGAASGNWLPEDLNKGRLDYFYYLVAALGVINLGYFLLCAKWYKYKGS 599


>ref|XP_002266777.1| PREDICTED: probable peptide/nitrate transporter At5g62680-like
           [Vitis vinifera]
          Length = 586

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = -3

Query: 847 LVTIVHRTTAHSPSGNWLPEDLNKGRLEFFYHMFAGLGILNFGYFLICARWYRYKGS 677
           LV+ VHR TA + SGNWLPEDLNKGRL++FY++ A LG++N GYFL+CA+WY+YKGS
Sbjct: 511 LVSTVHRMTAGAASGNWLPEDLNKGRLDYFYYLVAALGVINLGYFLLCAKWYKYKGS 567


>ref|NP_001237970.1| nitrate transporter NRT1-2 [Glycine max]
           gi|11933400|dbj|BAB19757.1| nitrate transporter NRT1-2
           [Glycine max]
          Length = 605

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 35/58 (60%), Positives = 51/58 (87%)
 Frame = -3

Query: 847 LVTIVHRTTAHSPSGNWLPEDLNKGRLEFFYHMFAGLGILNFGYFLICARWYRYKGSG 674
           L++I+HR TA S +GNWLP+DLNKGRL++FY++   L ++NFGYF++CA+WY+YKG+G
Sbjct: 525 LISIIHRATAKSSTGNWLPQDLNKGRLDYFYYIITALAVVNFGYFILCAKWYKYKGTG 582


Top