BLASTX nr result

ID: Coptis21_contig00004386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004386
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140108.1| PREDICTED: elongation of fatty acids protein...   108   4e-22
ref|XP_002275577.1| PREDICTED: putative elongation of fatty acid...   103   1e-20
dbj|BAJ99890.1| predicted protein [Hordeum vulgare subsp. vulgar...    94   1e-17
ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_004158640.1| PREDICTED: putative elongation of fatty acid...    88   6e-16

>ref|XP_004140108.1| PREDICTED: elongation of fatty acids protein 1-like [Cucumis
           sativus] gi|449490493|ref|XP_004158621.1| PREDICTED:
           elongation of fatty acids protein 1-like [Cucumis
           sativus]
          Length = 272

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/127 (40%), Positives = 72/127 (56%)
 Frame = +3

Query: 12  MESMYSIMRYWLSEHPLVSKFEWKEGETFGASTHFXXXXXXXXXXXXXXXXXXFLXXXXX 191
           M  + S++RYWL  HP++  FEW +G+TF ++  F                         
Sbjct: 1   MNQILSVLRYWLVNHPIILNFEWIQGQTFASTPLFLIVTVFTYLFLT-------FLLSHI 53

Query: 192 XXXXXXXXXLRFISTIHNFILVILSFIMAVGCTISTITQMPDHRWVFCFPPNQTPPSGPV 371
                    L+ IS +HNF+L+ILSFIMA+GCT+S+I  +P   W+ CFPP +TPP GP+
Sbjct: 54  PIPSISSHFLKSISALHNFVLLILSFIMALGCTLSSIYHVPHLHWIICFPP-RTPPVGPL 112

Query: 372 FFWAYIF 392
           FFWAY+F
Sbjct: 113 FFWAYVF 119


>ref|XP_002275577.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Vitis vinifera]
          Length = 265

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/120 (41%), Positives = 68/120 (56%)
 Frame = +3

Query: 33  MRYWLSEHPLVSKFEWKEGETFGASTHFXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXX 212
           + ++L +HP ++ FEWK+G T+GAST F                   +            
Sbjct: 4   LHHYLVDHPTLANFEWKQGHTWGASTQFLTLTIFCYLTLTYLLSHSQIPTLHPLL----- 58

Query: 213 XXLRFISTIHNFILVILSFIMAVGCTISTITQMPDHRWVFCFPPNQTPPSGPVFFWAYIF 392
             LR IS  HN +L++LS  M VGC++S  +Q PD RW+FCFPP+ TPPSGP FFWAY+F
Sbjct: 59  --LRPISAAHNLLLLLLSLAMVVGCSLSAASQTPDTRWIFCFPPD-TPPSGPTFFWAYVF 115


>dbj|BAJ99890.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326523123|dbj|BAJ88602.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 283

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/120 (39%), Positives = 59/120 (49%)
 Frame = +3

Query: 33  MRYWLSEHPLVSKFEWKEGETFGASTHFXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXX 212
           +R+ L EHP V+ F W+ G T GAS  F                   L            
Sbjct: 9   VRWLLVEHPAVASFHWRPGTTLGASPSFAAAAVCAYLAAVLLLHRRILPLPSLPPRA--- 65

Query: 213 XXLRFISTIHNFILVILSFIMAVGCTISTITQMPDHRWVFCFPPNQTPPSGPVFFWAYIF 392
             LR +S +HN +L+ +S  MA GC +S     P  RWVFCFPP  T PSGPVFFWA++F
Sbjct: 66  --LRAVSALHNCVLLAVSAAMAAGCALSAAATAPSPRWVFCFPPGATEPSGPVFFWAHVF 123


>ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|222840589|gb|EEE78136.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 12  MESMYSIMRYWLSEHPLVSKFEWKEGETFGASTHFXXXXXXXXXXXXXXXXXXFLXXXXX 191
           M  + S ++YWL  HP +  F W  G+TFG+S  F                   L     
Sbjct: 1   MNPILSTLQYWLVNHPKILHFSWTPGQTFGSSYQFLALTVAAYLFLTF-----LLSRIPL 55

Query: 192 XXXXXXXXXLRFISTIHNFILVILSFIMAVGCTISTI--TQMPDHRWVFCFPPNQTPPSG 365
                    L+ I+ +H+F+L +LSFIMA+GCT+S I  T  P    + CFPP+ TP SG
Sbjct: 56  PSSLRRPHILKPITALHSFVLFLLSFIMALGCTLSIISPTARPHFHHIICFPPH-TPQSG 114

Query: 366 PVFFWAYIF 392
           P+FFWAY+F
Sbjct: 115 PLFFWAYVF 123


>ref|XP_004158640.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Cucumis sativus]
          Length = 273

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/118 (38%), Positives = 59/118 (50%)
 Frame = +3

Query: 39  YWLSEHPLVSKFEWKEGETFGASTHFXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXX 218
           YWL  HP +  F W +GET G+S  F                   L              
Sbjct: 11  YWLVNHPKILNFSWSQGETLGSSPLFLTVTVIAYLSLTFLLSNLSLPLLPPTI------- 63

Query: 219 LRFISTIHNFILVILSFIMAVGCTISTITQMPDHRWVFCFPPNQTPPSGPVFFWAYIF 392
           L+ IS +HN IL+ LSF MA+GCT+ST +  P   ++ C  P +TPP GP+FFWAYIF
Sbjct: 64  LKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCL-PLKTPPRGPLFFWAYIF 120


Top