BLASTX nr result

ID: Coptis21_contig00004377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004377
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dio...   450   e-124
emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]   444   e-122
ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|2...   435   e-119
gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   424   e-116
gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   422   e-115

>ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis
            vinifera] gi|297738457|emb|CBI27658.3| unnamed protein
            product [Vitis vinifera]
          Length = 360

 Score =  450 bits (1157), Expect = e-124
 Identities = 230/362 (63%), Positives = 272/362 (75%), Gaps = 28/362 (7%)
 Frame = -1

Query: 1135 MYGSTGATTPDDSERTAFRRAEKKYKLFKNNNASSKRQKQPKAVDLSDVLDFKKAAQ--- 965
            MYGS G +  DD+ERTAFRRAEKKYK++ +++ SSK++KQ K VDLS+V+DFK   +   
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKKKKQLKQVDLSEVVDFKAILRSFN 58

Query: 964  --GEIPSGIYQLQSNFDFPVFCIENQPGFYFIPGVLSIEEQCHWIKESLISFPQPPNRTN 791
              GE+P G + LQ +FD PVFCIEN+PGFYFIP  L++EEQ  WI+ESLISFPQP NRTN
Sbjct: 59   QSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQPYNRTN 118

Query: 790  HYAIYGHLHDLFVAAQNKKVFIGEEAE---------------EVDRWQ--------SSNM 680
            H AIYG + DLF+AA+ +K+ + EE                 + +RW+        S   
Sbjct: 119  HNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENTVSSRGS 178

Query: 679  DQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVSLPHNKIPESLCQLAKRMAAPAMGTGEE 500
              K ++A+ LLRKLRWSTLGLQFDWSKR+YNVSLPHNKIP++LC LAK MAAPAM  G+ 
Sbjct: 179  TCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPAMSKGKV 238

Query: 499  FQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLR 320
            FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P+AMF+R
Sbjct: 239  FQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPPLAMFVR 298

Query: 319  SGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQ 140
            SGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y          RQ
Sbjct: 299  SGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRININIRQ 358

Query: 139  VF 134
            VF
Sbjct: 359  VF 360


>emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]
          Length = 366

 Score =  444 bits (1143), Expect = e-122
 Identities = 231/368 (62%), Positives = 272/368 (73%), Gaps = 34/368 (9%)
 Frame = -1

Query: 1135 MYGSTGATTPDDSERTAFRRAEKKYKLFKNNNASSK------RQKQPKAVDLSDVLDFKK 974
            MYGS G +  DD+ERTAFRRAEKKYK++ +++ SSK      R+KQ K VDLS+V+DFK 
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKNVLENFRKKQLKQVDLSEVVDFKA 58

Query: 973  AAQ-----GEIPSGIYQLQSNFDFPVFCIENQPGFYFIPGVLSIEEQCHWIKESLISFPQ 809
              +     GE+P G + LQ +FD PVFCIEN+PGFYFIP  L++EEQ  WI+ESLISFPQ
Sbjct: 59   ILRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQ 118

Query: 808  PPNRTNHYAIYGHLHDLFVAAQNKKVFIGEEAE---------------EVDRWQ------ 692
            P NRTNH AIYG + DLF+AA+ +K+ + EE                 + +RW+      
Sbjct: 119  PYNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENT 178

Query: 691  --SSNMDQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVSLPHNKIPESLCQLAKRMAAPA 518
              S     K ++A+ LLRKLRWSTLGLQFDWSKR+YNVSLPHNKIP++LC LAK MAAPA
Sbjct: 179  VSSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPA 238

Query: 517  MGTGEEFQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMP 338
            M  G+ FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P
Sbjct: 239  MSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPP 298

Query: 337  IAMFLRSGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXX 158
            +AMF+RSGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y      
Sbjct: 299  LAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRI 358

Query: 157  XXXXRQVF 134
                RQVF
Sbjct: 359  NINIRQVF 366


>ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|222842115|gb|EEE79662.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  435 bits (1118), Expect = e-119
 Identities = 226/356 (63%), Positives = 266/356 (74%), Gaps = 22/356 (6%)
 Frame = -1

Query: 1135 MYGSTGATTPDDSERTAFRRAEKKYKLFKNNNASSK-------RQKQPKAVDLSDVLDFK 977
            MYGS  A T DD++RT FR+ EKKYKL+ + N+          ++KQPK VDLS+VLDFK
Sbjct: 1    MYGSDKAVT-DDTDRTEFRKTEKKYKLYYDQNSKRYDLIFPFLKKKQPKQVDLSEVLDFK 59

Query: 976  KAAQ-----GEIPSGIYQLQSNFDFPVFCIENQPGFYFIPGVLSIEEQCHWIKESLISFP 812
                     GE+P  I  +   FD PVF +E++PGFYFIPG LS++EQC WI+ESL+SFP
Sbjct: 60   SFLDSYHQNGELPPEIVVVDCRFDRPVFGLESRPGFYFIPGALSVDEQCRWIRESLMSFP 119

Query: 811  QPPNRTNHYAIYGHLHDLFVAAQNKKVFIGEEAEEVD--RWQSSNMDQ--------KEVA 662
            QPPNRTNH AIYG + DLF+AA+ +KV + +E    +  RW     D         K V+
Sbjct: 120  QPPNRTNHNAIYGPISDLFIAAKERKVLVEDENMPANTRRWSFCEEDSVLLRGKSCKPVS 179

Query: 661  ATTLLRKLRWSTLGLQFDWSKRDYNVSLPHNKIPESLCQLAKRMAAPAMGTGEEFQPEAA 482
            A+ LLRKLRWSTLGLQFDWSKR+YNVSLPHNKIP+ LCQLAK++AAPAM  GEEF PEAA
Sbjct: 180  ASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDGLCQLAKKLAAPAMPVGEEFHPEAA 239

Query: 481  IVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSGDVVL 302
            IVNYF+SGD LGGHLDDMEADW+KPIVS+SLGCKAIFLLGGKSRED P+AMFLRSGDVVL
Sbjct: 240  IVNYFASGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDVVL 299

Query: 301  MAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 134
            MAG+ARECFHGVPRIFTDKENAEIT L L+   E+D  +L+Y          RQVF
Sbjct: 300  MAGEARECFHGVPRIFTDKENAEITALELHFCDEND--ILEYIRTSRININIRQVF 353


>gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  424 bits (1089), Expect = e-116
 Identities = 217/355 (61%), Positives = 260/355 (73%), Gaps = 24/355 (6%)
 Frame = -1

Query: 1126 STGATTPDDSERTAFRRAEKKYKLFKNNNASSKRQKQPKAVDLSDVLDFKKAAQ-----G 962
            + GAT  DD ERTAFRRAEKKYKL+   N+  K+Q QP+ VDLS+V+DFK   +     G
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQ-QPRPVDLSEVVDFKLILETFDRTG 59

Query: 961  EIPSGIYQLQSNFDFPVFCIENQPGFYFIPGVLSIEEQCHWIKESLISFPQPPNRTNHYA 782
            E P G++ +++  +FPV C++N+PGFYFIPG LS+EEQC WI+ESL SFPQPPNRTNH A
Sbjct: 60   ETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNRTNHNA 119

Query: 781  IYGHLHDLFVAAQNKKVFIGEEAE----------EVDRW----QSSNMDQK-----EVAA 659
            +YG ++DLF AAQ  KV + EE            +  RW    +S N+  K      + A
Sbjct: 120  LYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGGNSILA 179

Query: 658  TTLLRKLRWSTLGLQFDWSKRDYNVSLPHNKIPESLCQLAKRMAAPAMGTGEEFQPEAAI 479
            + LLRKL WSTLGLQFDWS+R+YNV LPHNKIP+ LCQLAK++A PAM  G+ F+PEAAI
Sbjct: 180  SVLLRKLHWSTLGLQFDWSQRNYNVDLPHNKIPDKLCQLAKKLAVPAMPLGDNFKPEAAI 239

Query: 478  VNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSGDVVLM 299
            VNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSGDVVLM
Sbjct: 240  VNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSGDVVLM 299

Query: 298  AGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 134
            AG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY          RQVF
Sbjct: 300  AGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


>gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  422 bits (1084), Expect = e-115
 Identities = 217/355 (61%), Positives = 260/355 (73%), Gaps = 24/355 (6%)
 Frame = -1

Query: 1126 STGATTPDDSERTAFRRAEKKYKLFKNNNASSKRQKQPKAVDLSDVLDFKKAAQ-----G 962
            + GAT  DD ERTAFRRAEKKYKL+   N+  K+Q QP+ VDLS+V+DFK   +     G
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQ-QPRPVDLSEVVDFKLILETFDRTG 59

Query: 961  EIPSGIYQLQSNFDFPVFCIENQPGFYFIPGVLSIEEQCHWIKESLISFPQPPNRTNHYA 782
            E P G++ +++  +FPV C++N+PGFYFIPG LS+EEQC WI+ESL SFPQPPNRTNH A
Sbjct: 60   ETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNRTNHNA 119

Query: 781  IYGHLHDLFVAAQNKKVFIGEEAE----------EVDRW----QSSNMDQK-----EVAA 659
            +YG ++DLF AAQ  KV + EE            +  RW    +S N+  K      + A
Sbjct: 120  LYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGGNSILA 179

Query: 658  TTLLRKLRWSTLGLQFDWSKRDYNVSLPHNKIPESLCQLAKRMAAPAMGTGEEFQPEAAI 479
            + LLRKLRWSTLGLQFDWS+R+YNV L HNKIP+ LCQLAK++A PAM  G+ F+PEAAI
Sbjct: 180  SVLLRKLRWSTLGLQFDWSQRNYNVDLLHNKIPDKLCQLAKKLAVPAMPLGDNFKPEAAI 239

Query: 478  VNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSGDVVLM 299
            VNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSGDVVLM
Sbjct: 240  VNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSGDVVLM 299

Query: 298  AGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 134
            AG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY          RQVF
Sbjct: 300  AGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


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