BLASTX nr result

ID: Coptis21_contig00004368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004368
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271154.1| PREDICTED: universal stress protein A-like p...   197   2e-48
ref|XP_002528512.1| conserved hypothetical protein [Ricinus comm...   188   2e-45
ref|XP_003616191.1| Universal stress protein A-like protein [Med...   175   1e-41
ref|XP_002327479.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_002884367.1| universal stress protein family protein [Ara...   171   2e-40

>ref|XP_002271154.1| PREDICTED: universal stress protein A-like protein [Vitis vinifera]
           gi|297738156|emb|CBI27357.3| unnamed protein product
           [Vitis vinifera]
          Length = 164

 Score =  197 bits (502), Expect = 2e-48
 Identities = 98/166 (59%), Positives = 122/166 (73%)
 Frame = -1

Query: 755 MTGALRVGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVQSPKLNPPQKRLWEDTGS 576
           M  A  +G GMDNS +SKSAL+WAVDNL  +D  D +I +YVQSPK   P+K+L+EDTGS
Sbjct: 1   MGKARAIGVGMDNSANSKSALRWAVDNL--IDAEDCLILIYVQSPKSEHPKKQLFEDTGS 58

Query: 575 PLIPLDEFREMNVSKQYGITPDPEVLDILETVHRTKGVTVVFKIYWGDPRDKLCDAVDDL 396
           PL+PL+EFR++N+SKQYG+ PDPEVLDIL+TV R+KG  VV K+YWGDPR+KLCDAVDDL
Sbjct: 59  PLVPLEEFRDINLSKQYGLNPDPEVLDILDTVARSKGAKVVAKVYWGDPREKLCDAVDDL 118

Query: 395 KLDXXXXXXXXXXXXXXXXXXXXSNHVVTNATCPVTVVKGAAMSKP 258
           KLD                    SN+V+ +A+CPVTVVKG   +KP
Sbjct: 119 KLDCLVLGSRGLGVLRRILLGSVSNYVMVHASCPVTVVKGTPATKP 164


>ref|XP_002528512.1| conserved hypothetical protein [Ricinus communis]
           gi|223532072|gb|EEF33881.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  188 bits (477), Expect = 2e-45
 Identities = 95/166 (57%), Positives = 117/166 (70%)
 Frame = -1

Query: 755 MTGALRVGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVQSPKLNPPQKRLWEDTGS 576
           M  A  VG  MD SP+SK+AL+WA +NL  +D  D ++ + VQ PK +  +K+L+E TGS
Sbjct: 1   MEKACTVGIAMDYSPTSKAALRWAAENL--IDSGDMVVLIQVQPPKADHTRKQLFEATGS 58

Query: 575 PLIPLDEFREMNVSKQYGITPDPEVLDILETVHRTKGVTVVFKIYWGDPRDKLCDAVDDL 396
           PL+PL+EFRE+N SKQYG++ DPEVLD L+TV RTKG  VV K+YWGDPR+KLCDAVDDL
Sbjct: 59  PLVPLEEFREINYSKQYGLSRDPEVLDFLDTVSRTKGAKVVAKVYWGDPREKLCDAVDDL 118

Query: 395 KLDXXXXXXXXXXXXXXXXXXXXSNHVVTNATCPVTVVKGAAMSKP 258
           KLD                    SN+VVTNA+CPVTVVKGA  SKP
Sbjct: 119 KLDSLVIGSRGLGPIKRELLGSVSNYVVTNASCPVTVVKGAQSSKP 164


>ref|XP_003616191.1| Universal stress protein A-like protein [Medicago truncatula]
           gi|355517526|gb|AES99149.1| Universal stress protein
           A-like protein [Medicago truncatula]
           gi|388504360|gb|AFK40246.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  175 bits (444), Expect = 1e-41
 Identities = 92/165 (55%), Positives = 111/165 (67%)
 Frame = -1

Query: 755 MTGALRVGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVQSPKLNPPQKRLWEDTGS 576
           M  A  VG  MD SP+SK AL+WAVDNL  ++ NDQII + VQ P  +  +K L+EDTGS
Sbjct: 1   MAKAHIVGVAMDFSPTSKLALRWAVDNL--INKNDQIIMINVQPPSADHTRKELFEDTGS 58

Query: 575 PLIPLDEFREMNVSKQYGITPDPEVLDILETVHRTKGVTVVFKIYWGDPRDKLCDAVDDL 396
           PL+PL+E RE+N +KQYGI  DPEV+DILET  + KG  VV K+YWGDPR+KLC+AV+DL
Sbjct: 59  PLVPLEELREINFTKQYGIAKDPEVIDILETASKIKGAKVVAKVYWGDPREKLCNAVEDL 118

Query: 395 KLDXXXXXXXXXXXXXXXXXXXXSNHVVTNATCPVTVVKGAAMSK 261
            LD                    S HVVTNA+CPVTVVKG   SK
Sbjct: 119 HLDSLVIGSRGLGTIKSVLLGSVSKHVVTNASCPVTVVKGMQSSK 163


>ref|XP_002327479.1| predicted protein [Populus trichocarpa] gi|222836033|gb|EEE74454.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  174 bits (442), Expect = 2e-41
 Identities = 92/166 (55%), Positives = 115/166 (69%)
 Frame = -1

Query: 755 MTGALRVGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVQSPKLNPPQKRLWEDTGS 576
           M  A   G GMD SP+SK+AL+WA +NL  +D  D++I +  Q PK +  +K+L+E+ GS
Sbjct: 1   MGKARTFGVGMDFSPTSKAALRWAAENL--IDEGDRVILIQAQPPKADHTRKQLFEENGS 58

Query: 575 PLIPLDEFREMNVSKQYGITPDPEVLDILETVHRTKGVTVVFKIYWGDPRDKLCDAVDDL 396
           PL+PL+EFRE+N SKQYG+T DPEVLDIL+TV +TKG  VV K+YWGDPR+KL DAVDDL
Sbjct: 59  PLVPLEEFREINYSKQYGLTHDPEVLDILDTVSKTKGAKVVAKVYWGDPREKLIDAVDDL 118

Query: 395 KLDXXXXXXXXXXXXXXXXXXXXSNHVVTNATCPVTVVKGAAMSKP 258
           KLD                    S +VVTNA+CPVTVVKG   SKP
Sbjct: 119 KLDSLVIGSRGLGAIKRVLLGSVSYYVVTNASCPVTVVKG---SKP 161


>ref|XP_002884367.1| universal stress protein family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330207|gb|EFH60626.1| universal stress
           protein family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 159

 Score =  171 bits (434), Expect = 2e-40
 Identities = 88/159 (55%), Positives = 111/159 (69%)
 Frame = -1

Query: 755 MTGALRVGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVQSPKLNPPQKRLWEDTGS 576
           M  A  VG GMD SP+SK AL+WA +NL  ++  D +I ++VQ    +  +K L+EDTGS
Sbjct: 1   MGKARTVGVGMDYSPTSKLALRWAAENL--LEDGDTVILIHVQPQNADHTRKILFEDTGS 58

Query: 575 PLIPLDEFREMNVSKQYGITPDPEVLDILETVHRTKGVTVVFKIYWGDPRDKLCDAVDDL 396
           PL+PL+EFRE+N+SKQYG+  DPEVLD+L+T+ R K V VV K+YWGDPR+KLCDAV++L
Sbjct: 59  PLVPLEEFREINLSKQYGLAYDPEVLDVLDTLSRAKKVKVVAKVYWGDPREKLCDAVENL 118

Query: 395 KLDXXXXXXXXXXXXXXXXXXXXSNHVVTNATCPVTVVK 279
           KLD                    SNHVVTNATCPVTVVK
Sbjct: 119 KLDSIVLGSRGLGSLKRILLGSVSNHVVTNATCPVTVVK 157