BLASTX nr result

ID: Coptis21_contig00004367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004367
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002514001.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...    91   7e-17
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...    89   3e-16
emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]    89   3e-16

>ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/91 (62%), Positives = 71/91 (78%)
 Frame = -2

Query: 275 RTGMGSWHENLMKATFGEVKVEGFGKSNGSSCFEKAVVMRHNIGKMGRERRLEVFDMLRC 96
           R+ MGSW ++LM+A FG+VK+EGFG  +G  CFEKAVVMRHN G MG+ER+L+VFD+LRC
Sbjct: 138 RSKMGSWLQHLMQANFGDVKIEGFG-GDGPYCFEKAVVMRHNEGSMGKERKLQVFDLLRC 196

Query: 95  KARAFCNVSFESSNAENNEREDPAVRLTLLM 3
            AR FC +S E    E NER +P +RLTLLM
Sbjct: 197 NARRFCGISPEGKGQETNERGEPIIRLTLLM 227


>ref|XP_002514001.1| conserved hypothetical protein [Ricinus communis]
           gi|223547087|gb|EEF48584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 479

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/91 (57%), Positives = 63/91 (69%)
 Frame = -2

Query: 275 RTGMGSWHENLMKATFGEVKVEGFGKSNGSSCFEKAVVMRHNIGKMGRERRLEVFDMLRC 96
           R+ MG+W ENLM   FGEVKVE   +     CFEKAVVMRHN G MG+E++L+VFD+LRC
Sbjct: 214 RSKMGAWLENLMGTNFGEVKVERLEEGAQPYCFEKAVVMRHNEGGMGKEKKLQVFDLLRC 273

Query: 95  KARAFCNVSFESSNAENNEREDPAVRLTLLM 3
            AR FC +       E NER +P +RLTLLM
Sbjct: 274 NARRFCGIDPAGKRKEVNERGEPIIRLTLLM 304


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = -2

Query: 275 RTGMGSWHENLMKATFGEV-KVEGFGKSNGSS--CFEKAVVMRHNIGKMGRERRLEVFDM 105
           R  MG W   L +ATFG    +EGFG +N +   CFEKAVVMRHN G M  +RR+E +D 
Sbjct: 224 RFNMGLWLSTLTEATFGSPPNIEGFGWANNNEPICFEKAVVMRHNEGGMSTDRRIETYDF 283

Query: 104 LRCKARAFCNVSFESSNAENNEREDPAVRLTLLM 3
           +RCKARA+CNVS E  N   +E+  P + +TL M
Sbjct: 284 MRCKARAYCNVSLEGGNMV-SEKGLPVIGMTLFM 316


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = -2

Query: 275 RTGMGSWHENLMKATFG-EVKVEGFGKSN--GSSCFEKAVVMRHNIGKMGRERRLEVFDM 105
           R  MG W ++L++ATFG  V +E FG S   G +CFE+AVVMRHN G M RERRLEV+DM
Sbjct: 232 RMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGGMSRERRLEVYDM 291

Query: 104 LRCKARAFCNVSFESSNAENNEREDPAVRLTLLM 3
           +RCKAR +CNV  E        R    + LT+LM
Sbjct: 292 MRCKARKYCNVRIEG-------RGLAVIGLTMLM 318


>emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]
          Length = 489

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = -2

Query: 275 RTGMGSWHENLMKATFG-EVKVEGFGKSN--GSSCFEKAVVMRHNIGKMGRERRLEVFDM 105
           R  MG W ++L++ATFG  V +E FG S   G +CFE+AVVMRHN G M RERRLEV+DM
Sbjct: 230 RMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGGMSRERRLEVYDM 289

Query: 104 LRCKARAFCNVSFESSNAENNEREDPAVRLTLLM 3
           +RCKAR +CNV  E        R    + LT+LM
Sbjct: 290 MRCKARKYCNVRIEG-------RGLAVIGLTMLM 316


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