BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004359
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310076.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|1...   133   1e-29
ref|XP_004148567.1| PREDICTED: 60S ribosomal protein L44-like [C...   133   2e-29
gb|AAA34366.1| ribosomal protein L41 [Candida maltosa]                133   2e-29
ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [V...   133   2e-29

>ref|XP_002310076.1| predicted protein [Populus trichocarpa]
           gi|224113271|ref|XP_002316442.1| predicted protein
           [Populus trichocarpa] gi|118484797|gb|ABK94266.1|
           unknown [Populus trichocarpa]
           gi|118487919|gb|ABK95781.1| unknown [Populus
           trichocarpa] gi|222852979|gb|EEE90526.1| predicted
           protein [Populus trichocarpa]
           gi|222865482|gb|EEF02613.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/80 (82%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   NVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 180
           NVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 3   NVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 62

Query: 181 KTTKKIVLRLQCQSCKHVSQ 240
           KTTKKIVLRLQCQSCKHVSQ
Sbjct: 63  KTTKKIVLRLQCQSCKHVSQ 82


>ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|118482179|gb|ABK93019.1|
           unknown [Populus trichocarpa]
           gi|222855831|gb|EEE93378.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/80 (81%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   NVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 180
           NVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 3   NVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 62

Query: 181 KTTKKIVLRLQCQSCKHVSQ 240
           KTTKKIVLRLQCQ+CKHVSQ
Sbjct: 63  KTTKKIVLRLQCQACKHVSQ 82


>ref|XP_004148567.1| PREDICTED: 60S ribosomal protein L44-like [Cucumis sativus]
           gi|449524244|ref|XP_004169133.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
          Length = 116

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/80 (81%), Positives = 65/80 (81%)
 Frame = +1

Query: 1   NVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 180
           NVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 3   NVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 62

Query: 181 KTTKKIVLRLQCQSCKHVSQ 240
           KTTKKIVLRLQCQ CKHVSQ
Sbjct: 63  KTTKKIVLRLQCQGCKHVSQ 82


>gb|AAA34366.1| ribosomal protein L41 [Candida maltosa]
          Length = 105

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/80 (81%), Positives = 65/80 (81%)
 Frame = +1

Query: 1   NVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 180
           NVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 3   NVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 62

Query: 181 KTTKKIVLRLQCQSCKHVSQ 240
           KTTKKIVLRLQCQ CKHVSQ
Sbjct: 63  KTTKKIVLRLQCQGCKHVSQ 82


>ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
           gi|255543771|ref|XP_002512948.1| 60S ribosomal protein
           L44 [Ricinus communis] gi|449436355|ref|XP_004135958.1|
           PREDICTED: 60S ribosomal protein L44-like [Cucumis
           sativus] gi|449461677|ref|XP_004148568.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449488799|ref|XP_004158175.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449524246|ref|XP_004169134.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|2500380|sp|Q96499.3|RL44_GOSHI RecName: Full=60S
           ribosomal protein L44 gi|1553129|gb|AAB08726.1|
           ribosomal protein L44 isoform a [Gossypium hirsutum]
           gi|1553131|gb|AAB08727.1| ribosomal protein L44 isoform
           b [Gossypium hirsutum] gi|223547959|gb|EEF49451.1| 60S
           ribosomal protein L44 [Ricinus communis]
          Length = 105

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/80 (81%), Positives = 65/80 (81%)
 Frame = +1

Query: 1   NVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 180
           NVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 3   NVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKA 62

Query: 181 KTTKKIVLRLQCQSCKHVSQ 240
           KTTKKIVLRLQCQ CKHVSQ
Sbjct: 63  KTTKKIVLRLQCQGCKHVSQ 82