BLASTX nr result

ID: Coptis21_contig00004343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004343
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21987.3| unnamed protein product [Vitis vinifera]              182   3e-44
emb|CAN59822.1| hypothetical protein VITISV_001981 [Vitis vinifera]   182   3e-44
ref|XP_002317419.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002528551.1| F-box/leucine rich repeat protein, putative ...   169   3e-40
gb|AEB97384.1| MAX2A [Petunia x hybrida]                              168   4e-40

>emb|CBI21987.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/137 (64%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
 Frame = +2

Query: 65  THLHDLPQEILTNILSPIHDTRTRNALSLVCKKWKDIERITRTSLTLRGNV-RDNMFMIP 241
           T +HDLP  IL++IL+ + DTR RNA +LVC+KW  +ER TRTSLTLRGNV  +N++MIP
Sbjct: 16  TTIHDLPDAILSSILASVTDTRARNAAALVCRKWLVLERGTRTSLTLRGNVVHNNLYMIP 75

Query: 242 QCFRFITHFDLSLLSPWGHSLFPDLSHEFHILAQVMHRAFPGVDSLTVYSRTPSTLQVLA 421
            CFR +TH DLSLLSPWGHSL    S    +LA ++  AFP V SLTVY+RTP+TLQ+LA
Sbjct: 76  TCFRAVTHLDLSLLSPWGHSLISPSSDPM-LLAHLLRHAFPMVTSLTVYARTPATLQLLA 134

Query: 422 PQWPNLKHVKLVRWHQR 472
           PQWPNL H+KLV+WHQR
Sbjct: 135 PQWPNLTHIKLVKWHQR 151


>emb|CAN59822.1| hypothetical protein VITISV_001981 [Vitis vinifera]
          Length = 712

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/137 (64%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
 Frame = +2

Query: 65  THLHDLPQEILTNILSPIHDTRTRNALSLVCKKWKDIERITRTSLTLRGNV-RDNMFMIP 241
           T +HDLP  IL++IL+ + DTR RNA +LVC+KW  +ER TRTSLTLRGNV  +N++MIP
Sbjct: 10  TTIHDLPDAILSSILASVTDTRARNAAALVCRKWLVLERGTRTSLTLRGNVVHNNLYMIP 69

Query: 242 QCFRFITHFDLSLLSPWGHSLFPDLSHEFHILAQVMHRAFPGVDSLTVYSRTPSTLQVLA 421
            CFR +TH DLSLLSPWGHSL    S    +LA ++  AFP V SLTVY+RTP+TLQ+LA
Sbjct: 70  TCFRAVTHLDLSLLSPWGHSLISPSSDPM-LLAHLLRHAFPMVTSLTVYARTPATLQLLA 128

Query: 422 PQWPNLKHVKLVRWHQR 472
           PQWPNL H+KLV+WHQR
Sbjct: 129 PQWPNLTHIKLVKWHQR 145


>ref|XP_002317419.1| predicted protein [Populus trichocarpa] gi|222860484|gb|EEE98031.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/142 (57%), Positives = 105/142 (73%)
 Frame = +2

Query: 47  KMLTTQTHLHDLPQEILTNILSPIHDTRTRNALSLVCKKWKDIERITRTSLTLRGNVRDN 226
           K   T  H HD+P  IL++I S I DTR+RNA+SLVC KW  IER TRT L+LRGN+RD 
Sbjct: 3   KKFNTNVHFHDIPDAILSSIFSLITDTRSRNAMSLVCLKWHLIERSTRTCLSLRGNIRD- 61

Query: 227 MFMIPQCFRFITHFDLSLLSPWGHSLFPDLSHEFHILAQVMHRAFPGVDSLTVYSRTPST 406
           +F++P CFR +++ DLSL+SPWG  +  D S    +LAQV+H  FP V +LTVY+R PS 
Sbjct: 62  LFLLPTCFRAVSNLDLSLVSPWGRPIL-DSSPNTTLLAQVLHCTFPSVVTLTVYARNPSI 120

Query: 407 LQVLAPQWPNLKHVKLVRWHQR 472
           L +LAPQWPNL+ +KLVRWH+R
Sbjct: 121 LHLLAPQWPNLRQIKLVRWHKR 142


>ref|XP_002528551.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223532053|gb|EEF33863.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 695

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
 Frame = +2

Query: 53  LTTQTHLHDLPQEILTNILSPIHDTRTRNALSLVCKKWKDIERITRTSLTLRGNVRDNMF 232
           +TT   ++DLP  IL+NI++ I DTRTRN+LSLV +K+  +ER TRTSLTLRGN RD ++
Sbjct: 3   ITTTATINDLPDVILSNIIASISDTRTRNSLSLVNRKFLTLERTTRTSLTLRGNARD-LY 61

Query: 233 MIPQCFRFITHFDLSLLSPWGHSLF-PDLSHEFHILAQVMHRAFPGVDSLTVYSRTPSTL 409
           MIP CFR +TH DLSLLSPWGHSL    L  +  +LA  +  AFP V SLTVY+R+P TL
Sbjct: 62  MIPTCFRSVTHLDLSLLSPWGHSLLASSLPSDPLLLAHRLGIAFPLVTSLTVYARSPCTL 121

Query: 410 QVLAPQWPNLKHVKLVRWHQR 472
            VL PQWP L HVKL+RWHQR
Sbjct: 122 HVLIPQWPLLSHVKLIRWHQR 142


>gb|AEB97384.1| MAX2A [Petunia x hybrida]
          Length = 708

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/136 (58%), Positives = 100/136 (73%)
 Frame = +2

Query: 65  THLHDLPQEILTNILSPIHDTRTRNALSLVCKKWKDIERITRTSLTLRGNVRDNMFMIPQ 244
           T L+DLP  IL+NI++ + D R+RN+ S VC+KW  +ER TR SLTLRGNVRD +FM+P 
Sbjct: 3   TQLNDLPDVILSNIIAAVTDVRSRNSTSFVCRKWLVLERSTRVSLTLRGNVRD-LFMLPT 61

Query: 245 CFRFITHFDLSLLSPWGHSLFPDLSHEFHILAQVMHRAFPGVDSLTVYSRTPSTLQVLAP 424
           CFR ITH DLSL+SPWGH L    + +  + A ++H AFP V SL VY+R P TLQ+L P
Sbjct: 62  CFRSITHLDLSLISPWGHPLLSPTTPDPSLTAHLLHHAFPFVTSLVVYTRHPFTLQLLPP 121

Query: 425 QWPNLKHVKLVRWHQR 472
            WP LK +KLVRWHQR
Sbjct: 122 LWPQLKQIKLVRWHQR 137


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