BLASTX nr result

ID: Coptis21_contig00004342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004342
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi...   188   5e-46
ref|XP_003531271.1| PREDICTED: LETM1 and EF-hand domain-containi...   187   2e-45
ref|XP_003524999.1| PREDICTED: LETM1 and EF-hand domain-containi...   187   2e-45
ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2...   185   5e-45

>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial [Vitis vinifera]
            gi|296084337|emb|CBI24725.3| unnamed protein product
            [Vitis vinifera]
          Length = 764

 Score =  188 bits (478), Expect = 5e-46
 Identities = 100/148 (67%), Positives = 112/148 (75%)
 Frame = -1

Query: 564  REREEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXXKISSALI 385
            REREEF+RLVNKEI+LYNSMV             AYR                ++SSALI
Sbjct: 610  REREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEAYRAARDESDHAAKVAVGDEVSSALI 669

Query: 384  DRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLNKEGVQEL 205
            DRVDAMLQ LEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKDTL KEG+QEL
Sbjct: 670  DRVDAMLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVAAAALYLKDTLGKEGIQEL 729

Query: 204  ISSLSKDRDGKILVEDIVKLGTQKEDVH 121
            IS+LSKD+DGKI VEDIV+LG++ ED +
Sbjct: 730  ISNLSKDKDGKIHVEDIVRLGSRNEDAN 757


>ref|XP_003531271.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial-like [Glycine max]
          Length = 738

 Score =  187 bits (474), Expect = 2e-45
 Identities = 101/153 (66%), Positives = 115/153 (75%)
 Frame = -1

Query: 561  EREEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXXKISSALID 382
            ERE+F+RLVNKEI+LYNSMV             AY+                K+SSALI 
Sbjct: 581  EREDFLRLVNKEIELYNSMVEEEGPNGKKDAFKAYKAAREEHEHTNELDEGDKVSSALIG 640

Query: 381  RVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLNKEGVQELI 202
            RVDAMLQ LEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKDTL KEG+QEL+
Sbjct: 641  RVDAMLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDTLGKEGIQELV 700

Query: 201  SSLSKDRDGKILVEDIVKLGTQKEDVHAVGEEQ 103
            SSLSKDRDGKILVEDIVKLG+ +ED +A  +++
Sbjct: 701  SSLSKDRDGKILVEDIVKLGSWREDGNAHEDDE 733


>ref|XP_003524999.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial-like [Glycine max]
          Length = 736

 Score =  187 bits (474), Expect = 2e-45
 Identities = 102/148 (68%), Positives = 112/148 (75%)
 Frame = -1

Query: 561  EREEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXXKISSALID 382
            ERE+F+RLVNKEI+LYNSMV             AY+                K+SSALI 
Sbjct: 580  EREDFLRLVNKEIELYNSMVEEEGSNGKKDAFKAYKAAREEHEHATESGEGDKVSSALIG 639

Query: 381  RVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLNKEGVQELI 202
            RVDAMLQ LEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKDTL KEG+QELI
Sbjct: 640  RVDAMLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDTLGKEGIQELI 699

Query: 201  SSLSKDRDGKILVEDIVKLGTQKEDVHA 118
            SSLSKDRDGKILVEDIVKLG+ +ED +A
Sbjct: 700  SSLSKDRDGKILVEDIVKLGSWREDGNA 727


>ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|222852630|gb|EEE90177.1|
            predicted protein [Populus trichocarpa]
          Length = 750

 Score =  186 bits (472), Expect = 3e-45
 Identities = 100/154 (64%), Positives = 111/154 (72%)
 Frame = -1

Query: 564  REREEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXXKISSALI 385
            REREEF+ LVNKEI+LYNSMV             AYR                ++SSALI
Sbjct: 596  REREEFLGLVNKEIELYNSMVEKEGNDGEKEAVKAYRAAREETDRASEADERDEVSSALI 655

Query: 384  DRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLNKEGVQEL 205
            +RVD MLQ LEKEIDDVDA+IGD WR+LDRDYDGKVTPEEVA AA YLKDTL KEG+QEL
Sbjct: 656  ERVDGMLQNLEKEIDDVDAKIGDHWRILDRDYDGKVTPEEVAAAAMYLKDTLGKEGIQEL 715

Query: 204  ISSLSKDRDGKILVEDIVKLGTQKEDVHAVGEEQ 103
            IS+LSKDRDGKILVEDIVKLG+  ED  A  E +
Sbjct: 716  ISNLSKDRDGKILVEDIVKLGSWTEDAKATEERE 749


>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  185 bits (470), Expect = 5e-45
 Identities = 101/153 (66%), Positives = 113/153 (73%)
 Frame = -1

Query: 564 REREEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXXKISSALI 385
           REREEF+RLV KEI LYN+MV             AY+                KISSALI
Sbjct: 532 REREEFLRLVKKEIDLYNNMVDKEGTEGEEEAKKAYKAAREESDQAAETAISDKISSALI 591

Query: 384 DRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLNKEGVQEL 205
           +RVDAMLQKLEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKD L KEG+QEL
Sbjct: 592 NRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLGKEGIQEL 651

Query: 204 ISSLSKDRDGKILVEDIVKLGTQKEDVHAVGEE 106
           IS+LSKDR+GKILVEDIV+LG++ +D  A  EE
Sbjct: 652 ISNLSKDREGKILVEDIVRLGSEMKDADAAAEE 684


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