BLASTX nr result

ID: Coptis21_contig00004331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004331
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526954.1| protein with unknown function [Ricinus commu...   120   1e-25
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   115   4e-24
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   112   4e-23
ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23

>ref|XP_002526954.1| protein with unknown function [Ricinus communis]
           gi|223533706|gb|EEF35441.1| protein with unknown
           function [Ricinus communis]
          Length = 187

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/67 (77%), Positives = 63/67 (94%)
 Frame = +3

Query: 3   FLREHLDKSGCYVGNNFIKAVNCEEEVAGGYVPGKGIIVCSNHVTIQDEVNQVVIHELIH 182
           FLREHL+K+GC +G+NFIKAVNCE++++GGYV G GI+VCSNH+ +QDEVNQVVIHELIH
Sbjct: 34  FLREHLEKAGCGIGDNFIKAVNCEKKMSGGYVSGDGIVVCSNHMNMQDEVNQVVIHELIH 93

Query: 183 AYDDCRA 203
           AYDDCRA
Sbjct: 94  AYDDCRA 100


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  117 bits (293), Expect = 1e-24
 Identities = 50/67 (74%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   FLREHLDKSGCYVGNNFIKAVNCEEEVAGGYVPGKGIIVCSNHVTIQDEVNQVVIHELIH 182
           FLREH++K+GC VG NF+KAVNC++++AGGYV G+GI+VCSNH+  QD+VNQVVIHELIH
Sbjct: 34  FLREHMEKAGCGVGENFLKAVNCDKKIAGGYVRGEGIMVCSNHMNTQDDVNQVVIHELIH 93

Query: 183 AYDDCRA 203
           AYDDCRA
Sbjct: 94  AYDDCRA 100


>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/67 (74%), Positives = 62/67 (92%)
 Frame = +3

Query: 3   FLREHLDKSGCYVGNNFIKAVNCEEEVAGGYVPGKGIIVCSNHVTIQDEVNQVVIHELIH 182
           FL EHL+KSGC +G+ FIKAV+CE++++GGYV G+GI+VCSNH+ IQDEVNQVVIHELIH
Sbjct: 42  FLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIH 101

Query: 183 AYDDCRA 203
           A+DDCRA
Sbjct: 102 AFDDCRA 108


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/67 (73%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   FLREHLDKSGCYVGNNFIKAVNCEEEVAGGYVPGKGIIVCSNHVTIQDEVNQVVIHELIH 182
           FLRE+L+KSGC +G+ FIKA+ C  +V+GGY  G+GI+VCSNH+ IQDEVNQVVIHELIH
Sbjct: 42  FLRENLEKSGCAIGDKFIKAIYCNTKVSGGYARGEGIVVCSNHMNIQDEVNQVVIHELIH 101

Query: 183 AYDDCRA 203
           AYDDCRA
Sbjct: 102 AYDDCRA 108


>ref|XP_002301724.1| predicted protein [Populus trichocarpa] gi|222843450|gb|EEE80997.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   FLREHLDKSGCYVGNNFIKAVNCEEEVAGGYVPGKGIIVCSNHVTIQDEVNQVVIHELIH 182
           FLRE+L+K+GC V  NF KAVNC++ +AGGYV GKGI+VCSNH+ IQD+VNQV+ HELIH
Sbjct: 21  FLRENLEKAGCGVSENFFKAVNCDKSIAGGYVRGKGIMVCSNHMNIQDDVNQVIAHELIH 80

Query: 183 AYDDCRA 203
           AYDDC+A
Sbjct: 81  AYDDCQA 87