BLASTX nr result

ID: Coptis21_contig00004325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004325
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34267.1| methylmalonate-semialdehyde dehydrogenase [Cucumi...   336   1e-90
ref|XP_004155427.1| PREDICTED: methylmalonate-semialdehyde dehyd...   334   5e-90
ref|XP_004136898.1| PREDICTED: methylmalonate-semialdehyde dehyd...   334   5e-90
ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|2...   333   9e-90
gb|ABK95002.1| unknown [Populus trichocarpa]                          333   9e-90

>gb|ADN34267.1| methylmalonate-semialdehyde dehydrogenase [Cucumis melo subsp.
           melo]
          Length = 520

 Score =  336 bits (861), Expect = 1e-90
 Identities = 160/177 (90%), Positives = 172/177 (97%)
 Frame = -1

Query: 531 TQEVVSQIPLTTTEEFKSAVSSAKHAFTSWRNTPITTRQRVMFKLQELIRRDIDKLALNI 352
           TQEVVSQ+PLTT +EFK+AVS+AK AF +WRNTP+TTRQR+MFKLQELI RDIDKLALNI
Sbjct: 66  TQEVVSQVPLTTKDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELISRDIDKLALNI 125

Query: 351 TTEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGEFVSNVSHGIDTYSLREPLGVCAGIC 172
           TTEQGKTLKDAHGDVFRGLEVVEHACGM +LQMGE+VSNVSHGIDTYS+REPLGVCAGIC
Sbjct: 126 TTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGIC 185

Query: 171 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHG 1
           PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAS+ILAELAMEAGLPNGVLN+VHG
Sbjct: 186 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHG 242


>ref|XP_004155427.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial-like [Cucumis sativus]
          Length = 520

 Score =  334 bits (856), Expect = 5e-90
 Identities = 158/177 (89%), Positives = 173/177 (97%)
 Frame = -1

Query: 531 TQEVVSQIPLTTTEEFKSAVSSAKHAFTSWRNTPITTRQRVMFKLQELIRRDIDKLALNI 352
           TQEVVSQ+PL+T +EFK+AVS+AK AF +WRNTP+TTRQR+MFKLQELIRRDIDKLALNI
Sbjct: 66  TQEVVSQVPLSTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNI 125

Query: 351 TTEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGEFVSNVSHGIDTYSLREPLGVCAGIC 172
           TTEQGKTLKDAHGDVFRGLEVVEHACGM +LQMGE+VSNVSHGIDTYS+REPLGVCAGIC
Sbjct: 126 TTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGIC 185

Query: 171 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHG 1
           PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAS++LAELAMEAGLP+GVLN+VHG
Sbjct: 186 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNVVHG 242


>ref|XP_004136898.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial-like [Cucumis sativus]
          Length = 520

 Score =  334 bits (856), Expect = 5e-90
 Identities = 158/177 (89%), Positives = 173/177 (97%)
 Frame = -1

Query: 531 TQEVVSQIPLTTTEEFKSAVSSAKHAFTSWRNTPITTRQRVMFKLQELIRRDIDKLALNI 352
           TQEVVSQ+PL+T +EFK+AVS+AK AF +WRNTP+TTRQR+MFKLQELIRRDIDKLALNI
Sbjct: 66  TQEVVSQVPLSTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNI 125

Query: 351 TTEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGEFVSNVSHGIDTYSLREPLGVCAGIC 172
           TTEQGKTLKDAHGDVFRGLEVVEHACGM +LQMGE+VSNVSHGIDTYS+REPLGVCAGIC
Sbjct: 126 TTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGIC 185

Query: 171 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHG 1
           PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAS++LAELAMEAGLP+GVLN+VHG
Sbjct: 186 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNVVHG 242


>ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  333 bits (854), Expect = 9e-90
 Identities = 160/177 (90%), Positives = 171/177 (96%)
 Frame = -1

Query: 531 TQEVVSQIPLTTTEEFKSAVSSAKHAFTSWRNTPITTRQRVMFKLQELIRRDIDKLALNI 352
           TQEVVSQIPLTT EEFK+AVS+AKHAF +WRNTPITTRQRVM KLQELIRRD DKLA+NI
Sbjct: 26  TQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPITTRQRVMLKLQELIRRDTDKLAMNI 85

Query: 351 TTEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGEFVSNVSHGIDTYSLREPLGVCAGIC 172
           TTEQGKTLKDAHGDVFRGLEVVEHACGM TLQMGE+V NV++GIDT+S+REPLGVCAGIC
Sbjct: 86  TTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVPNVANGIDTFSIREPLGVCAGIC 145

Query: 171 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHG 1
           PFNFPAMIPLWMFP+AVTCGNTFVLKPSEKDPGAS+ILAELAMEAGLPNGVLNIVHG
Sbjct: 146 PFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNIVHG 202


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score =  333 bits (854), Expect = 9e-90
 Identities = 160/177 (90%), Positives = 171/177 (96%)
 Frame = -1

Query: 531 TQEVVSQIPLTTTEEFKSAVSSAKHAFTSWRNTPITTRQRVMFKLQELIRRDIDKLALNI 352
           TQEVVSQIPLTT EEFK+AVS+AKHAF +WRNTPITTRQRVM KLQELIRRD DKLA+NI
Sbjct: 71  TQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPITTRQRVMLKLQELIRRDTDKLAMNI 130

Query: 351 TTEQGKTLKDAHGDVFRGLEVVEHACGMGTLQMGEFVSNVSHGIDTYSLREPLGVCAGIC 172
           TTEQGKTLKDAHGDVFRGLEVVEHACGM TLQMGE+V NV++GIDT+S+REPLGVCAGIC
Sbjct: 131 TTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVPNVANGIDTFSIREPLGVCAGIC 190

Query: 171 PFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASMILAELAMEAGLPNGVLNIVHG 1
           PFNFPAMIPLWMFP+AVTCGNTFVLKPSEKDPGAS+ILAELAMEAGLPNGVLNIVHG
Sbjct: 191 PFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNIVHG 247


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