BLASTX nr result

ID: Coptis21_contig00004317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004317
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   511   e-142
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   510   e-142
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   498   e-138
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   482   e-133
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132

>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  511 bits (1317), Expect = e-142
 Identities = 242/293 (82%), Positives = 270/293 (92%)
 Frame = +3

Query: 162  MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPIYAIV 341
            MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII+LMAPIYA+ 
Sbjct: 1    MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 342  SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 521
            SFVGL DFQGS+ FF+ LES+KECYEALVIAKFLALLYSYLNISIS ++VPDG+KGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 522  HSFPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPVCSVLMISLQLLGMYQSWISWTFTI 701
            HSFPMTLFQP TVRLD  TLKLLKYWTWQFVVIRPVCS+LMI+LQ+LG+Y +W+SWTFTI
Sbjct: 121  HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGIYPNWLSWTFTI 180

Query: 702  ILNLSISLALYSLVLFYHAFAKELEPHKPLSKFLCIKGIVFFCFWQGIVLDVLVDMGVIR 881
            ILN+S+SLALYSLVLFYH FAKEL+PHKPL+KF+C+KGIVFFCFWQGIVL++LV +GVIR
Sbjct: 181  ILNISVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGVIR 240

Query: 882  SHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAAAKLGQKNK 1040
            SHHFWLDVEH++EA QNVLVC EMVVFSVLQQYAFHVAPY GD  AKL    K
Sbjct: 241  SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYSGDMEAKLKLSKK 293


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  510 bits (1313), Expect = e-142
 Identities = 241/293 (82%), Positives = 268/293 (91%)
 Frame = +3

Query: 162  MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPIYAIV 341
            MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII LMAPIYA+ 
Sbjct: 1    MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 342  SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 521
            SFVGL DFQGS+ FF+ LES+KECYEALVIAKFLALLYSYLNISIS ++VPDG+KGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 522  HSFPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPVCSVLMISLQLLGMYQSWISWTFTI 701
            HSFPMTLFQP TVRLD  TLKLLKYWTWQFVVIRPVCS+LMI+LQ+LGMY +W+SWTFTI
Sbjct: 121  HSFPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGMYPNWLSWTFTI 180

Query: 702  ILNLSISLALYSLVLFYHAFAKELEPHKPLSKFLCIKGIVFFCFWQGIVLDVLVDMGVIR 881
            ILN S+SLALYSLVLFYH FAKEL+PHKPL+KF+C+KGIVFFCFWQGIVL++LV +G+IR
Sbjct: 181  ILNFSVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIVFFCFWQGIVLEILVALGIIR 240

Query: 882  SHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAAAKLGQKNK 1040
            SHHFWLDVEH++EA QNVLVC EMVVFSVLQQYA+HVAPY GD  AKL    K
Sbjct: 241  SHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAYHVAPYSGDMEAKLKLSKK 293


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
            gi|223539328|gb|EEF40919.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 294

 Score =  498 bits (1283), Expect = e-138
 Identities = 231/288 (80%), Positives = 265/288 (92%)
 Frame = +3

Query: 162  MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPIYAIV 341
            MD ST++RGQ+TL+GSA   ML+MHFTVQLLSQHLFYWKNPKEQKAI+II+LMAPIYAI 
Sbjct: 1    MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 342  SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 521
            SFVGL D +GS+ FF+FL+S+KECYEALVIAKFLAL+YSYLNISIS ++VPD +KGREIH
Sbjct: 61   SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGREIH 120

Query: 522  HSFPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPVCSVLMISLQLLGMYQSWISWTFTI 701
            HSFPMTLFQPHTVRLD  TL+LLKYWTWQFV+IRP+CSVLMI+LQ+LG Y +W+SWTFTI
Sbjct: 121  HSFPMTLFQPHTVRLDHRTLRLLKYWTWQFVIIRPICSVLMITLQILGTYPTWLSWTFTI 180

Query: 702  ILNLSISLALYSLVLFYHAFAKELEPHKPLSKFLCIKGIVFFCFWQGIVLDVLVDMGVIR 881
            ILN+S+SLALYSLV+FYH FAKEL PHKPL+KFLCIKGIVFFCFWQG+VLD+LV +G+IR
Sbjct: 181  ILNISVSLALYSLVVFYHVFAKELTPHKPLAKFLCIKGIVFFCFWQGVVLDILVAIGIIR 240

Query: 882  SHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAAAKL 1025
            SHHFWLDVEH+EEA QNVLVC EMVVFSVLQQYA+HVAPY GD   K+
Sbjct: 241  SHHFWLDVEHIEEALQNVLVCLEMVVFSVLQQYAYHVAPYSGDIERKM 288


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  482 bits (1240), Expect = e-133
 Identities = 226/294 (76%), Positives = 261/294 (88%)
 Frame = +3

Query: 159  VMDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPIYAI 338
            +MDFS+MDRGQITLLG    V+L++HFTVQLLSQH+FYWKNPKEQKAIIII+LMAPIYA 
Sbjct: 1    MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 339  VSFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREI 518
             S+VGL D QGS+ FF FL+SVKECYEALVIAKFLAL+YSYL ISIS ++VPD VKGREI
Sbjct: 61   DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKFLALMYSYLKISISKNIVPDEVKGREI 120

Query: 519  HHSFPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPVCSVLMISLQLLGMYQSWISWTFT 698
            HHSFPMTLF P T RLD   L LLK+WTWQFV+IRP+CS+LMI+LQ+LG+Y SW+SWTFT
Sbjct: 121  HHSFPMTLFVPRTARLDHRNLVLLKHWTWQFVIIRPICSILMITLQMLGIYPSWLSWTFT 180

Query: 699  IILNLSISLALYSLVLFYHAFAKELEPHKPLSKFLCIKGIVFFCFWQGIVLDVLVDMGVI 878
            IILN+S+S+ALYSLVLFYH FAKEL PHKPL+KFLCIKG+VFFCFWQGIVLD+LV  G+I
Sbjct: 181  IILNISVSVALYSLVLFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLDMLVSAGII 240

Query: 879  RSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAAAKLGQKNK 1040
            RSHHFWLDVEH+EEA+QNVLV  EMVVFSVLQQYA+HVAPY G+   K+ +K +
Sbjct: 241  RSHHFWLDVEHIEEAFQNVLVILEMVVFSVLQQYAYHVAPYSGEVETKMLKKRE 294


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  478 bits (1230), Expect = e-132
 Identities = 226/293 (77%), Positives = 262/293 (89%)
 Frame = +3

Query: 162  MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPIYAIV 341
            MDFS MDRGQITLLG A  V+LT+ FTVQLLSQHLFYWKNPKEQKAIIII+LMAPIYA+ 
Sbjct: 1    MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 342  SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 521
            SFVGL +FQGS  FF FL+SVKECYEALVIAKFL+LLYSYL ISIS ++VPD VKGREIH
Sbjct: 61   SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKFLSLLYSYLKISISKNIVPDEVKGREIH 120

Query: 522  HSFPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPVCSVLMISLQLLGMYQSWISWTFTI 701
            H+FPMTLF PHTVRLD   L +LK+WTWQFV+IRP CS+LMI+LQ+LG+Y +W+SWTFTI
Sbjct: 121  HAFPMTLFVPHTVRLDHRNLVVLKHWTWQFVIIRPTCSILMITLQMLGIYPNWLSWTFTI 180

Query: 702  ILNLSISLALYSLVLFYHAFAKELEPHKPLSKFLCIKGIVFFCFWQGIVLDVLVDMGVIR 881
            ILN+S+SLALYSL++FYH FAKEL PHKPL+KFLCIKG+VFFCFWQGIVL++LV MG+IR
Sbjct: 181  ILNISVSLALYSLLVFYHVFAKELAPHKPLAKFLCIKGVVFFCFWQGIVLEMLVSMGIIR 240

Query: 882  SHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAAAKLGQKNK 1040
             +HFWLDVEH+EEAYQNVLV  EMVVFSVLQ+YA+HVAPY G+  AK+ +K +
Sbjct: 241  PNHFWLDVEHLEEAYQNVLVILEMVVFSVLQRYAYHVAPYSGEVDAKMLKKRE 293


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