BLASTX nr result

ID: Coptis21_contig00004314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004314
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523284.1| expressed protein, putative [Ricinus communi...    62   4e-08
ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...    62   5e-08
emb|CBI32690.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002523284.1| expressed protein, putative [Ricinus communis]
           gi|223537497|gb|EEF39123.1| expressed protein, putative
           [Ricinus communis]
          Length = 282

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +1

Query: 220 TPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDNTLHELFQKGDVAQ 387
           TP V  S K D+E N P Y  +   VHENLL+  VK        VD  LHEL Q GD AQ
Sbjct: 70  TPSVNSSSKKDMEENGPAYSLLSHPVHENLLRTNVKFQSNRGSMVDMILHELLQHGDSAQ 129

Query: 388 NYMHGS 405
            YM GS
Sbjct: 130 KYMQGS 135


>ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 48/139 (34%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   LEKRFELAKTEVXXXXXXXXXXXXXXXXXXXXXXXEEKQQVHTVLAETGYAPSNISPPKT 180
           LE+RF +AK E+                       +++Q+ H V    G+   N +   T
Sbjct: 13  LERRFAVAKAELV----------------------QQQQKKHKVTHHEGHRKENNNAAST 50

Query: 181 PSFRKGRFAFVGYTPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDN 348
              R    A    TP    S K D E N   Y ++ Q  HENLL  GVK   K    VD 
Sbjct: 51  SLHR----ADAPKTPSSSLS-KKDPEENGLAYSQLPQAAHENLLTTGVKFESKKGSVVDK 105

Query: 349 TLHELFQKGDVAQNYMHGS 405
            LHELFQ GD +Q YM GS
Sbjct: 106 ILHELFQHGDASQKYMQGS 124


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
 Frame = +1

Query: 220 TPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDNTLHELFQKGDVAQ 387
           TP +  S K DVEAN P Y ++ QTVHENLL    K++ K     D  LH+L + GD A 
Sbjct: 69  TPTLNASLKKDVEANGPAYSQLSQTVHENLLATNAKITSKRGSTADKILHDLLKNGDSAH 128

Query: 388 NYMHGS 405
            YM GS
Sbjct: 129 KYMMGS 134


>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
 Frame = +1

Query: 127 TVLAETGYAPSNISPPKTPSFRKGRFAFVGYTPGVGPSGKSDVEANDPTYYRICQTVHEN 306
           +V + T    S+++P    S +KG             +   DVEAN P Y ++ QTVHEN
Sbjct: 56  SVGSSTHPTDSSVTPTLNASLKKGH------------ATSQDVEANGPAYSQLSQTVHEN 103

Query: 307 LLKVGVKLSEK----VDNTLHELFQKGDVAQNYMHGS 405
           LL    K++ K     D  LH+L + GD A  YM GS
Sbjct: 104 LLATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGS 140


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