BLASTX nr result
ID: Coptis21_contig00004314
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00004314 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523284.1| expressed protein, putative [Ricinus communi... 62 4e-08 ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258... 62 5e-08 emb|CBI32690.3| unnamed protein product [Vitis vinifera] 59 5e-07 >ref|XP_002523284.1| expressed protein, putative [Ricinus communis] gi|223537497|gb|EEF39123.1| expressed protein, putative [Ricinus communis] Length = 282 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +1 Query: 220 TPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDNTLHELFQKGDVAQ 387 TP V S K D+E N P Y + VHENLL+ VK VD LHEL Q GD AQ Sbjct: 70 TPSVNSSSKKDMEENGPAYSLLSHPVHENLLRTNVKFQSNRGSMVDMILHELLQHGDSAQ 129 Query: 388 NYMHGS 405 YM GS Sbjct: 130 KYMQGS 135 >ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1| predicted protein [Populus trichocarpa] Length = 289 Score = 62.4 bits (150), Expect = 4e-08 Identities = 48/139 (34%), Positives = 60/139 (43%), Gaps = 4/139 (2%) Frame = +1 Query: 1 LEKRFELAKTEVXXXXXXXXXXXXXXXXXXXXXXXEEKQQVHTVLAETGYAPSNISPPKT 180 LE+RF +AK E+ +++Q+ H V G+ N + T Sbjct: 13 LERRFAVAKAELV----------------------QQQQKKHKVTHHEGHRKENNNAAST 50 Query: 181 PSFRKGRFAFVGYTPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDN 348 R A TP S K D E N Y ++ Q HENLL GVK K VD Sbjct: 51 SLHR----ADAPKTPSSSLS-KKDPEENGLAYSQLPQAAHENLLTTGVKFESKKGSVVDK 105 Query: 349 TLHELFQKGDVAQNYMHGS 405 LHELFQ GD +Q YM GS Sbjct: 106 ILHELFQHGDASQKYMQGS 124 >ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera] Length = 300 Score = 62.0 bits (149), Expect = 5e-08 Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Frame = +1 Query: 220 TPGVGPSGKSDVEANDPTYYRICQTVHENLLKVGVKLSEK----VDNTLHELFQKGDVAQ 387 TP + S K DVEAN P Y ++ QTVHENLL K++ K D LH+L + GD A Sbjct: 69 TPTLNASLKKDVEANGPAYSQLSQTVHENLLATNAKITSKRGSTADKILHDLLKNGDSAH 128 Query: 388 NYMHGS 405 YM GS Sbjct: 129 KYMMGS 134 >emb|CBI32690.3| unnamed protein product [Vitis vinifera] Length = 306 Score = 58.5 bits (140), Expect = 5e-07 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Frame = +1 Query: 127 TVLAETGYAPSNISPPKTPSFRKGRFAFVGYTPGVGPSGKSDVEANDPTYYRICQTVHEN 306 +V + T S+++P S +KG + DVEAN P Y ++ QTVHEN Sbjct: 56 SVGSSTHPTDSSVTPTLNASLKKGH------------ATSQDVEANGPAYSQLSQTVHEN 103 Query: 307 LLKVGVKLSEK----VDNTLHELFQKGDVAQNYMHGS 405 LL K++ K D LH+L + GD A YM GS Sbjct: 104 LLATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGS 140