BLASTX nr result

ID: Coptis21_contig00004313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004313
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...    74   2e-11
ref|XP_002523284.1| expressed protein, putative [Ricinus communi...    73   7e-11
emb|CBI32690.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802...    68   2e-09

>ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 56/156 (35%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
 Frame = +1

Query: 286 MASDQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQHVHTHTPASLTTVA 465
           MA+DQ+KRT++ALE+RFA+AK E+                  ++K+H  TH         
Sbjct: 1   MATDQRKRTMDALERRFAVAKAEL---------------VQQQQKKHKVTHHEGHRKENN 45

Query: 466 DAGAETGPSNISPQKDTPSFRKGRFAFVGYTPGAGPSGKSDVEANDPTYYRIHQSVHENL 645
           +A      S    + D P            TP +  S K D E N   Y ++ Q+ HENL
Sbjct: 46  NAA-----STSLHRADAPK-----------TPSSSLS-KKDPEENGLAYSQLPQAAHENL 88

Query: 646 LREGVKLSEK----VDNTLHKLFQKGDVAQNYMHGS 741
           L  GVK   K    VD  LH+LFQ GD +Q YM GS
Sbjct: 89  LTTGVKFESKKGSVVDKILHELFQHGDASQKYMQGS 124


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 54/160 (33%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
 Frame = +1

Query: 295 DQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQHVHT-------HTPASL 453
           DQKKRTLEALE+RFA+AK E+                  ++++H+            +  
Sbjct: 9   DQKKRTLEALERRFAVAKAELL-----------------QQQEHLSKKRFRGVDEKVSPC 51

Query: 454 TTVADAGAETGPSNISPQKDTPSFRKGRFAFVGYTPGAGPSGKSDVEANDPTYYRIHQSV 633
           T     G+ T P++ S                  TP    S K DVEAN P Y ++ Q+V
Sbjct: 52  TNSFSVGSSTHPTDSS-----------------VTPTLNASLKKDVEANGPAYSQLSQTV 94

Query: 634 HENLLREGVKLSEK----VDNTLHKLFQKGDVAQNYMHGS 741
           HENLL    K++ K     D  LH L + GD A  YM GS
Sbjct: 95  HENLLATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGS 134


>ref|XP_002523284.1| expressed protein, putative [Ricinus communis]
           gi|223537497|gb|EEF39123.1| expressed protein, putative
           [Ricinus communis]
          Length = 282

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 52/153 (33%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
 Frame = +1

Query: 295 DQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQHVHTHTPASLTTVADAG 474
           DQ+KRT EALE+RFA+AK E+                  ++++   T  P       +  
Sbjct: 9   DQRKRTQEALERRFAVAKAEL-----------------LQQQKKSQTQRPNDEHRKENYK 51

Query: 475 AETGPSNISPQKDTPSFRKGRFAFVGYTPGAGPSGKSDVEANDPTYYRIHQSVHENLLRE 654
             T P +++   + P+           TP    S K D+E N P Y  +   VHENLLR 
Sbjct: 52  I-TNPLSVASPANLPA--------APVTPSVNSSSKKDMEENGPAYSLLSHPVHENLLRT 102

Query: 655 GVKLSEK----VDNTLHKLFQKGDVAQNYMHGS 741
            VK        VD  LH+L Q GD AQ YM GS
Sbjct: 103 NVKFQSNRGSMVDMILHELLQHGDSAQKYMQGS 135


>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
 Frame = +1

Query: 295 DQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQHVH-------THTPASL 453
           DQKKRTLEALE+RFA+AK E+                  ++++H+            +  
Sbjct: 9   DQKKRTLEALERRFAVAKAEL-----------------LQQQEHLSKKRFRGVDEKVSPC 51

Query: 454 TTVADAGAETGP--SNISPQKDTPSFRKGRFAFVGYTPGAGPSGKSDVEANDPTYYRIHQ 627
           T     G+ T P  S+++P  +  S +KG             +   DVEAN P Y ++ Q
Sbjct: 52  TNSFSVGSSTHPTDSSVTPTLNA-SLKKGH------------ATSQDVEANGPAYSQLSQ 98

Query: 628 SVHENLLREGVKLSEK----VDNTLHKLFQKGDVAQNYMHGS 741
           +VHENLL    K++ K     D  LH L + GD A  YM GS
Sbjct: 99  TVHENLLATNAKITSKRGSTADKILHDLLKNGDSAHKYMMGS 140


>ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802747 [Glycine max]
          Length = 300

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
 Frame = +1

Query: 286 MASDQKKRTLEALEKRFALAKTEVXXXXXXXXXXXXXXXXXXEEKQHVHTHTPASLTTVA 465
           MA D +KRTLEALE+R A AK EV                  +EK++  T        + 
Sbjct: 1   MAEDSRKRTLEALERRIAFAKVEV----------------LQKEKKNKKTINEDGKLPIP 44

Query: 466 DAGAETGPSNISPQKDTPSFRKGRFAFVGYTPGAGPSGKSDVEANDPTYYRIHQSVHENL 645
                  PS       + S +KG F+F G+T         D+E + P Y ++   V+ NL
Sbjct: 45  ADSTSNDPSPHLLHSSSVSSKKGNFSFSGHTT------LQDIE-DGPAYAQLSVPVNGNL 97

Query: 646 LREGVKLSEK----VDNTLHKLFQKGDVAQNYMHGS 741
           L    + S +    +D  LH+L QKGD A  YM GS
Sbjct: 98  LTTNEEFSAERGGSIDGILHELLQKGDAAHKYMQGS 133


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