BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004304
         (1775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   520   e-145
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   499   e-138
ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   489   e-135
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   479   e-133
emb|CBI19050.3| unnamed protein product [Vitis vinifera]              478   e-132

>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  520 bits (1340), Expect = e-145
 Identities = 265/421 (62%), Positives = 325/421 (77%), Gaps = 2/421 (0%)
 Frame = +3

Query: 3    FDERGIPYDSMLSKQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARKLKE 182
            FDE G+PYDS  S + +S+ LVEEFMLLANKTAAEIISRA+PD ALLRRHPEPN RKL+E
Sbjct: 710  FDEHGVPYDSTFSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALLRRHPEPNLRKLRE 769

Query: 183  FEVFWLKHGFELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCTGDF 362
            FE F  KHG ELDTSSSGQFN SL +++EKLKND VL+DIL+SYASRPM  A YFC+GD 
Sbjct: 770  FEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLATYFCSGDL 829

Query: 363  RDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAIPKCINGE 542
            +D +NEW+HYALA+PLYTHFTSPLRRYPDI+V RTL+AAIEAEE YL+    I K  NGE
Sbjct: 830  KDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGE 889

Query: 543  DIRRKCFSNLYFDTHSADSKECREALAATALNHRVPGMEKVAEIAAYCNERRQASRHAED 722
            ++RR CF+ ++FD ++A+S E ++AL+  A  HR+P  E +A++ AYCNER+ ASRHA+D
Sbjct: 890  EMRR-CFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKD 948

Query: 723  AGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWLEAT 902
               +LYMW LLKKKE L++EARVLGLGP+FMSIYIH L IERRI+YD+V+GLTVEWL+AT
Sbjct: 949  GCERLYMWVLLKKKEVLLSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDAT 1008

Query: 903  STLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGEL-FMHDNNGKEVVMEVGSE- 1076
            STLV+NL  N+ S  +G+  ++R LEDVA VI  C+L+ E+    D   +     VG + 
Sbjct: 1009 STLVVNLSTNKCSRWRGNQGKYRQLEDVAWVIRPCNLKQEVDAFGDTVNEWGATTVGRDA 1068

Query: 1077 GIVHKDDGPIDEPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARLYMCS 1256
             +       + E G+   NE+DP  FPLTVR LSTI V LHA+GG DGPLDIGARLYM S
Sbjct: 1069 SVASLRPRCMSESGVPDANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNS 1128

Query: 1257 Y 1259
            Y
Sbjct: 1129 Y 1129


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score =  499 bits (1284), Expect = e-138
 Identities = 254/421 (60%), Positives = 323/421 (76%)
 Frame = +3

Query: 3    FDERGIPYDSMLSKQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARKLKE 182
            FDE G+PYDSMLS++ ES+FLVEE+MLLAN+ AAE+I RAYPD ALLRRHPEPN RKL+E
Sbjct: 718  FDENGVPYDSMLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMRKLRE 777

Query: 183  FEVFWLKHGFELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCTGDF 362
            F  F  KHG EL+TSSSGQF+ SL +++EKLK DPVLY+ILIS+A+RPM  A+YFC+GD 
Sbjct: 778  FMAFCQKHGLELNTSSSGQFHWSLEQIREKLKGDPVLYNILISFATRPMQLASYFCSGDL 837

Query: 363  RDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAIPKCINGE 542
            +D ENEW HYALA+P YTHFTSPLRRYPDI+V RTL A IEAEE Y++ Q A+ +     
Sbjct: 838  KDSENEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKAL-QGYKEV 896

Query: 543  DIRRKCFSNLYFDTHSADSKECREALAATALNHRVPGMEKVAEIAAYCNERRQASRHAED 722
             ++++CF+++ FD  +A+S E REAL+A A+ H VP  E +A+IAAYCNER+ ASR+ +D
Sbjct: 897  KVQKRCFTDISFDKIAAESMEGREALSAAAVKHSVPCAETLADIAAYCNERKLASRNVKD 956

Query: 723  AGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWLEAT 902
            A  KLY+W LLKKKE L++EAR+LGLGP+FMSIYI  LAIERRI+YD+V+GLTVEWLE T
Sbjct: 957  ACDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLTVEWLETT 1016

Query: 903  STLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGELFMHDNNGKEVVMEVGSEGI 1082
            STLVL++  ++ + R+G   ++R  E+VAL+    +L+   F  DN+ +  VM+V     
Sbjct: 1017 STLVLSMSTSKCAFRRGCPNKWRAFEEVALLTCPYNLD---FTMDNSNQSEVMKVDDSIT 1073

Query: 1083 VHKDDGPIDEPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARLYMCSYL 1262
                + PI    +S   E+DPA FPLTV +LSTI VALHA+GG DGPLDIG RLYM SY 
Sbjct: 1074 AMDREEPISRSDLSE-TEIDPAFFPLTVCLLSTIPVALHAVGGDDGPLDIGVRLYMSSYF 1132

Query: 1263 R 1265
            R
Sbjct: 1133 R 1133


>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1184

 Score =  489 bits (1259), Expect = e-135
 Identities = 252/420 (60%), Positives = 316/420 (75%)
 Frame = +3

Query: 3    FDERGIPYDSMLSKQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARKLKE 182
            FDE G+PYDS LS++ ES+FLVEE+MLLAN+ AAE+I RAYPD ALLRRHPEPN RKL+E
Sbjct: 770  FDENGVPYDSRLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMRKLRE 829

Query: 183  FEVFWLKHGFELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCTGDF 362
            F  F  KHG EL+TSSSG+ + SL +++EKLK DPVLY+ILISYA+RPM  A+YFC+GD 
Sbjct: 830  FMAFCQKHGLELNTSSSGELHWSLEQIREKLKGDPVLYNILISYATRPMQLASYFCSGDL 889

Query: 363  RDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAIPKCINGE 542
            +D ENEW HYALA+P YTHFTSPLRRYPDI+V RTL A IEAEE Y++ Q A+ +     
Sbjct: 890  KDSENEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKAL-QGSKEV 948

Query: 543  DIRRKCFSNLYFDTHSADSKECREALAATALNHRVPGMEKVAEIAAYCNERRQASRHAED 722
             ++++CF+ + FD  +A+S E REAL+A A+ H VP  E +A+IA YCN R+ ASR+ +D
Sbjct: 949  KVQKRCFTGINFDKSAAESTEGREALSAAAVKHSVPCAETLADIATYCNGRKLASRNVKD 1008

Query: 723  AGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWLEAT 902
            A  KLY+W LLKKKE L++EAR+LGLGP+FMSIYI  LAIERRI+YD+V GLTVEWLE T
Sbjct: 1009 ACDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVQGLTVEWLETT 1068

Query: 903  STLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGELFMHDNNGKEVVMEVGSEGI 1082
            STLVL++  N+ + R+G   + RP E+VAL+    +L+   F  DN+    VM+V  + I
Sbjct: 1069 STLVLSMSTNKCAYRRGCPNKLRPFEEVALLTCPYNLD---FTTDNSNPSEVMKV-DDSI 1124

Query: 1083 VHKDDGPIDEPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARLYMCSYL 1262
               D  PI          +DPA FPLTVR+LSTI VALHA+GG DGPLDIG RLYM SY+
Sbjct: 1125 SAMDREPISRSDALE-TLIDPAFFPLTVRLLSTIPVALHAVGGDDGPLDIGVRLYMSSYI 1183


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  479 bits (1234), Expect = e-133
 Identities = 243/421 (57%), Positives = 314/421 (74%), Gaps = 1/421 (0%)
 Frame = +3

Query: 3    FDERGIPYDSMLSKQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARKLKE 182
            FDE GIPYDS+L  + +SDFLVEEFMLLAN+TAAE+ISRA+PD ALLRRHP PN RKL+E
Sbjct: 685  FDEYGIPYDSVLCGRKDSDFLVEEFMLLANRTAAEVISRAFPDSALLRRHPAPNMRKLRE 744

Query: 183  FEVFWLKHGFELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCTGDF 362
            FE F  KHG +LD+SSSG F+ SL  ++ KLK+D VL  IL+SYASRPM  A YFC+G  
Sbjct: 745  FEAFCCKHGLQLDSSSSGNFHQSLECIRGKLKDDSVLCGILMSYASRPMQLATYFCSGVM 804

Query: 363  RDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAIPKCINGE 542
            +D  N+W HYALA+ LYTHFTSPLRRYPDI+V RTL+AAIEAEE Y++ +    K   G+
Sbjct: 805  KDNMNDWGHYALAVALYTHFTSPLRRYPDIIVHRTLAAAIEAEELYMRSRRISCKAGMGD 864

Query: 543  DIRRKCFSNLYFDTHSADSKECREALAATALNHRVPGMEKVAEIAAYCNERRQASRHAED 722
             + R CF+ +YFD  +A+S E +EAL+A A  HR+P  E +A + AYCN+R+ ASRH +D
Sbjct: 865  KVMR-CFTGIYFDKDAAESVEGKEALSAAASKHRIPCTESLANVVAYCNDRKLASRHVKD 923

Query: 723  AGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWLEAT 902
            A  KLYMWALLK+KE L+++ARVLGLGP+FMSIYI  LAIERRI+Y++V+GLTVEWLEAT
Sbjct: 924  ACDKLYMWALLKRKEVLLSDARVLGLGPRFMSIYIQKLAIERRIYYEEVEGLTVEWLEAT 983

Query: 903  STLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGELFMHDNNGKEV-VMEVGSEG 1079
            STLVLNLC+ +R+ R+     +R L++ A V++ C L+ E  M   + KE  + +  + G
Sbjct: 984  STLVLNLCSYKRAFRRSGSGFYRELDEFAWVVSPCSLKLEADMVGESPKECRIADSDNNG 1043

Query: 1080 IVHKDDGPIDEPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARLYMCSY 1259
               +   PI E      +++DP  FP+TVR+LSTI VALHA+GG D P++IG R++  SY
Sbjct: 1044 KASQHIDPISE------SKIDPVVFPITVRLLSTIPVALHAVGGDDRPIEIGVRVFASSY 1097

Query: 1260 L 1262
            L
Sbjct: 1098 L 1098


>emb|CBI19050.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  478 bits (1230), Expect = e-132
 Identities = 242/388 (62%), Positives = 295/388 (76%)
 Frame = +3

Query: 96   TAAEIISRAYPDCALLRRHPEPNARKLKEFEVFWLKHGFELDTSSSGQFNLSLGKVKEKL 275
            TAAEIISRA+PD ALLRRHPEPN RKL+EFE F  KHG ELDTSSSGQFN SL +++EKL
Sbjct: 642  TAAEIISRAFPDNALLRRHPEPNLRKLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKL 701

Query: 276  KNDPVLYDILISYASRPMNSAAYFCTGDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIV 455
            KND VL+DIL+SYASRPM  A YFC+GD +D +NEW+HYALA+PLYTHFTSPLRRYPDI+
Sbjct: 702  KNDSVLFDILLSYASRPMQLATYFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDII 761

Query: 456  VQRTLSAAIEAEERYLQQQTAIPKCINGEDIRRKCFSNLYFDTHSADSKECREALAATAL 635
            V RTL+AAIEAEE YL+    I K  NGE++RR CF+ ++FD ++A+S E ++AL+  A 
Sbjct: 762  VHRTLAAAIEAEELYLKHGAKIQKVKNGEEMRR-CFTGIHFDKNAAESVEGQKALSVAAS 820

Query: 636  NHRVPGMEKVAEIAAYCNERRQASRHAEDAGAKLYMWALLKKKETLVAEARVLGLGPKFM 815
             HR+P  E +A++ AYCNER+ ASRHA+D   +LYMW LLKKKE L++EARVLGLGP+FM
Sbjct: 821  KHRLPCTEILADVVAYCNERKLASRHAKDGCERLYMWVLLKKKEVLLSEARVLGLGPRFM 880

Query: 816  SIYIHNLAIERRIHYDDVDGLTVEWLEATSTLVLNLCANRRSLRKGSYCRFRPLEDVALV 995
            SIYIH L IERRI+YD+V+GLTVEWL+ATSTLV+NL  N+ S  +G+  ++R LEDVA V
Sbjct: 881  SIYIHKLGIERRIYYDEVEGLTVEWLDATSTLVVNLSTNKCSRWRGNQGKYRQLEDVAWV 940

Query: 996  INSCDLEGELFMHDNNGKEVVMEVGSEGIVHKDDGPIDEPGISGINEVDPAAFPLTVRIL 1175
            I  C+L+ E+                       D  + E G+   NE+DP  FPLTVR L
Sbjct: 941  IRPCNLKQEV-----------------------DACMSESGVPDANEIDPLFFPLTVRTL 977

Query: 1176 STIHVALHAIGGGDGPLDIGARLYMCSY 1259
            STI V LHA+GG DGPLDIGARLYM SY
Sbjct: 978  STIPVVLHAVGGDDGPLDIGARLYMNSY 1005