BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004303
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communi...   541   e-151
ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA ...   540   e-151
emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]   539   e-151
gb|AEI55401.1| TTG1 [Rubus idaeus]                                    535   e-150
gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]               533   e-149

>ref|XP_002530884.1| WD-repeat protein, putative [Ricinus communis]
            gi|223529537|gb|EEF31490.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 342

 Score =  541 bits (1394), Expect = e-151
 Identities = 270/350 (77%), Positives = 300/350 (85%), Gaps = 7/350 (2%)
 Frame = +1

Query: 133  NSGQE---RSENLFTYDSPYPIYAMAYSSYDENSKSQH-RIATGSFLEDSNNKVDILSFD 300
            NS QE   +SEN  TYDSPYP+YAMA+SS   +S + H RIA GSF+ED +N+VDILS +
Sbjct: 3    NSTQESHLKSENSITYDSPYPLYAMAFSSSPSSSSTHHHRIAVGSFIEDYSNRVDILSLN 62

Query: 301  EETLAFKTHPNLSFDHPYPPTKLMFHPS---KPNSPDLLASSGDFLRLWEIKEGGXXXXX 471
             ETL+FKTHP++SFDHPYPPTKLMFHP+   + +S DLLASSGD+LRLWEI+        
Sbjct: 63   TETLSFKTHPSVSFDHPYPPTKLMFHPASSLRKSSSDLLASSGDYLRLWEIR-------- 114

Query: 472  XXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQL 651
                 V   S+LNNSK+SEFCAPLTSFDWN ++P+RIGT SIDTTCTIWD+E+G VETQL
Sbjct: 115  --GDVVEPLSVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGCVETQL 172

Query: 652  IAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQD 831
            IAHDKEVYD+AWGEA VFASVSADGSVRIFDLRDKEHSTI+YESP PDTPLLRLAWNKQD
Sbjct: 173  IAHDKEVYDMAWGEARVFASVSADGSVRIFDLRDKEHSTILYESPRPDTPLLRLAWNKQD 232

Query: 832  LRYMATILMDSNKVVILDIRSPTVPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALI 1011
            LRYMATILMDSNKVVILDIRSPT PVAEL+RHRASVNAIAWAPQS RHICSAGDDAQALI
Sbjct: 233  LRYMATILMDSNKVVILDIRSPTTPVAELERHRASVNAIAWAPQSCRHICSAGDDAQALI 292

Query: 1012 WELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 1161
            W+LPTVAGPNGIDPM  YSA SEINQLQWS  QPDWIAIAF++KMQ LKV
Sbjct: 293  WDLPTVAGPNGIDPMSMYSASSEINQLQWSAAQPDWIAIAFSNKMQFLKV 342


>ref|XP_003634157.1| PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform 1 [Vitis
            vinifera] gi|359490757|ref|XP_003634158.1| PREDICTED:
            protein TRANSPARENT TESTA GLABRA 1 isoform 2 [Vitis
            vinifera] gi|113707434|gb|ABF66625.2| WD-repeat 1 [Vitis
            vinifera]
          Length = 336

 Score =  540 bits (1392), Expect = e-151
 Identities = 263/344 (76%), Positives = 296/344 (86%)
 Frame = +1

Query: 130  SNSGQERSENLFTYDSPYPIYAMAYSSYDENSKSQHRIATGSFLEDSNNKVDILSFDEET 309
            S     RSEN  TY+SPYP+Y+MA SS  ++     RIA GSF+E+ +N+VDI+SFDE+ 
Sbjct: 5    SQESHLRSENCVTYESPYPLYSMAISSSTQHHHP--RIAIGSFIEELSNRVDIVSFDEDA 62

Query: 310  LAFKTHPNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXXXXV 489
            LA +THP+LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++            +
Sbjct: 63   LAIRTHPSLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS----------I 112

Query: 490  VQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKE 669
               S+LNNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAHDKE
Sbjct: 113  QPLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKE 172

Query: 670  VYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRYMAT 849
            VYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RYMAT
Sbjct: 173  VYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRYMAT 232

Query: 850  ILMDSNKVVILDIRSPTVPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWELPTV 1029
            ILMDSNK+VILDIRSPT+PVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWELPT+
Sbjct: 233  ILMDSNKIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWELPTL 292

Query: 1030 AGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 1161
            AGPNGIDPM  Y A SEINQLQWS  QP+WIAIAF++K+QLLKV
Sbjct: 293  AGPNGIDPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQLLKV 336


>emb|CAN67365.1| hypothetical protein VITISV_033304 [Vitis vinifera]
          Length = 336

 Score =  539 bits (1388), Expect = e-151
 Identities = 262/338 (77%), Positives = 293/338 (86%)
 Frame = +1

Query: 148  RSENLFTYDSPYPIYAMAYSSYDENSKSQHRIATGSFLEDSNNKVDILSFDEETLAFKTH 327
            RSEN  TY+SPYP+Y+MA SS  ++     RIA GSF+E+  N+VDI+SFDE+ LA +TH
Sbjct: 11   RSENCVTYESPYPLYSMAISSSTQHHHP--RIAIGSFIEEXXNRVDIVSFDEDALAIRTH 68

Query: 328  PNLSFDHPYPPTKLMFHPSKPNSPDLLASSGDFLRLWEIKEGGXXXXXXXXXXVVQKSLL 507
            P LSFDHPYPPTKLMFHP+   SPD LASSG++LRLWE+++            +   S+L
Sbjct: 69   PXLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNS----------IQPLSVL 118

Query: 508  NNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYDIAW 687
            NNSKTSEFCAPLTSFDWN V+PRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYDIAW
Sbjct: 119  NNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYDIAW 178

Query: 688  GEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWNKQDLRYMATILMDSN 867
            GEAGVFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWNKQD+RYMATILMDSN
Sbjct: 179  GEAGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRYMATILMDSN 238

Query: 868  KVVILDIRSPTVPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQALIWELPTVAGPNGI 1047
            K+VILDIRSPT+PVAEL+RHRASVNAI+WAPQS RHICS GDD+QALIWELPT+AGPNGI
Sbjct: 239  KIVILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWELPTLAGPNGI 298

Query: 1048 DPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 1161
            DPM  Y A SEINQLQWS  QP+WIAIAF++K+QLLKV
Sbjct: 299  DPMSVYLASSEINQLQWSAAQPEWIAIAFSNKLQLLKV 336


>gb|AEI55401.1| TTG1 [Rubus idaeus]
          Length = 344

 Score =  535 bits (1379), Expect = e-150
 Identities = 268/353 (75%), Positives = 295/353 (83%), Gaps = 4/353 (1%)
 Frame = +1

Query: 115  NRMMESNSGQERSENLFTYDSPYPIYAMAYSSYDENSKSQHRIATGSFLEDSNNKVDILS 294
            N   ES+ G E S    TY+SPYP+YAMA+SS        HRIA GSF+E+ +N+VDILS
Sbjct: 3    NSTQESHLGPENS---VTYESPYPLYAMAFSSPRTRHHHHHRIAVGSFIEEFSNRVDILS 59

Query: 295  FDEETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGGXX 462
            FD +TL  K +P LSFDHPYPPTKLMFHP+ PN+     D+LASSGD+LRLWE+K+    
Sbjct: 60   FDPDTLTLKPNPALSFDHPYPPTKLMFHPN-PNTLHKTNDILASSGDYLRLWEVKDSSVD 118

Query: 463  XXXXXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGVVE 642
                        S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GVVE
Sbjct: 119  RLEPI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGVVE 171

Query: 643  TQLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLAWN 822
            TQLIAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLAWN
Sbjct: 172  TQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 231

Query: 823  KQDLRYMATILMDSNKVVILDIRSPTVPVAELDRHRASVNAIAWAPQSPRHICSAGDDAQ 1002
            KQDLRYMATILMDSNKVVILDIRSPT+PVAEL+RH+ SVNAIAWAPQS RHICSAGDD+Q
Sbjct: 232  KQDLRYMATILMDSNKVVILDIRSPTMPVAELERHKGSVNAIAWAPQSARHICSAGDDSQ 291

Query: 1003 ALIWELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 1161
            ALIWELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF +KMQLLKV
Sbjct: 292  ALIWELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFTNKMQLLKV 344


>gb|AFY23208.1| transparent testa glabra 1 [Rosa rugosa]
          Length = 346

 Score =  533 bits (1374), Expect = e-149
 Identities = 270/355 (76%), Positives = 299/355 (84%), Gaps = 6/355 (1%)
 Frame = +1

Query: 115  NRMMESNSGQERSENLFTYDSPYPIYAMAYS-SYDENSKSQH-RIATGSFLEDSNNKVDI 288
            N   ES+ G E S    TYDSPYP+YAMA+S +    ++  H RIA GSF+E+ +N+VDI
Sbjct: 3    NSTQESHLGPENS---VTYDSPYPLYAMAFSPAAPTRTRHNHPRIAVGSFIEEFSNRVDI 59

Query: 289  LSFDEETLAFKTHPNLSFDHPYPPTKLMFHPSKPNS----PDLLASSGDFLRLWEIKEGG 456
            LSFD +TL  K +P+LSFDHPYPPTKLMFHP+ PNS     D+LASSGD+LRLWE+K+  
Sbjct: 60   LSFDPDTLTLKPNPSLSFDHPYPPTKLMFHPN-PNSLHKSSDILASSGDYLRLWEVKDSS 118

Query: 457  XXXXXXXXXXVVQKSLLNNSKTSEFCAPLTSFDWNPVDPRRIGTSSIDTTCTIWDVERGV 636
                          S+LNNSKTSEFCAPLTSFDWN ++PRRIGTSSIDTTCTIWD+E+GV
Sbjct: 119  VDRLEPI-------SVLNNSKTSEFCAPLTSFDWNEIEPRRIGTSSIDTTCTIWDIEKGV 171

Query: 637  VETQLIAHDKEVYDIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPHPDTPLLRLA 816
            VETQLIAHDKEVYDIAWGEA VFASVSADGSVRIFDLRDKEHSTIIYESP PDTPLLRLA
Sbjct: 172  VETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLA 231

Query: 817  WNKQDLRYMATILMDSNKVVILDIRSPTVPVAELDRHRASVNAIAWAPQSPRHICSAGDD 996
            WNKQDLRYMATILMDSNKVVILDIRSPT+PVAEL+RHR SVNAIAWAPQS RHICSAGDD
Sbjct: 232  WNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSARHICSAGDD 291

Query: 997  AQALIWELPTVAGPNGIDPMLAYSADSEINQLQWSVLQPDWIAIAFASKMQLLKV 1161
            +QALIWELPTVAGPNGIDPM  YSA +EINQLQWS  QPDWIAIAF++KMQLLKV
Sbjct: 292  SQALIWELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFSNKMQLLKV 346