BLASTX nr result

ID: Coptis21_contig00004293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004293
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527695.1| glutaredoxin-1, grx1, putative [Ricinus comm...   183   5e-44
emb|CBI17872.3| unnamed protein product [Vitis vinifera]              176   4e-42
ref|XP_002266525.1| PREDICTED: glutaredoxin-C4-like [Vitis vinif...   176   4e-42
gb|ADA70346.1| glutaredoxin [Litchi chinensis]                        174   2e-41
ref|XP_002325236.1| glutaredoxin C4 [Populus trichocarpa] gi|118...   174   3e-41

>ref|XP_002527695.1| glutaredoxin-1, grx1, putative [Ricinus communis]
           gi|223532926|gb|EEF34694.1| glutaredoxin-1, grx1,
           putative [Ricinus communis]
          Length = 140

 Score =  183 bits (464), Expect = 5e-44
 Identities = 87/124 (70%), Positives = 109/124 (87%)
 Frame = +2

Query: 167 ALVFLFTTSLYTSARASSADSHTSFVKKTVSSHNIVIFSKSYCPYCRRVKAVFKELNQSP 346
           A + +  TSL  ++ A+ +DS  +FVKKT+SSH IVIFSKSYCPYC+R KAVFK+LNQ P
Sbjct: 19  ATITVIATSLSWASAATGSDS--AFVKKTISSHKIVIFSKSYCPYCKRAKAVFKQLNQIP 76

Query: 347 HIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGVAK 526
           H++ELDERDDG ++QDALS++VGRRTVPQVF++GKHIGGSDDTVEA+ESG+LA+LLG+A 
Sbjct: 77  HVVELDERDDGQNIQDALSKIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELADLLGIAG 136

Query: 527 KDDL 538
           KDDL
Sbjct: 137 KDDL 140


>emb|CBI17872.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  176 bits (447), Expect = 4e-42
 Identities = 83/124 (66%), Positives = 105/124 (84%), Gaps = 4/124 (3%)
 Frame = +2

Query: 173 VFLFTTSLYTSARA----SSADSHTSFVKKTVSSHNIVIFSKSYCPYCRRVKAVFKELNQ 340
           +F+ T SL   + A    SS+D+   FVKKT+SSH I IFSKSYCPYC+R KAVFKELNQ
Sbjct: 9   LFVLTASLCLPSSAAADHSSSDAAADFVKKTISSHKIAIFSKSYCPYCKRAKAVFKELNQ 68

Query: 341 SPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGV 520
            P+++ELD+R+DGW++QDALS +VGRRTVPQVF+NGKHIGGSDDTVEA++SG LA+LLG+
Sbjct: 69  VPYVVELDQREDGWNIQDALSGMVGRRTVPQVFINGKHIGGSDDTVEAYQSGDLAKLLGI 128

Query: 521 AKKD 532
           A++D
Sbjct: 129 AEED 132


>ref|XP_002266525.1| PREDICTED: glutaredoxin-C4-like [Vitis vinifera]
          Length = 140

 Score =  176 bits (447), Expect = 4e-42
 Identities = 83/124 (66%), Positives = 105/124 (84%), Gaps = 4/124 (3%)
 Frame = +2

Query: 173 VFLFTTSLYTSARA----SSADSHTSFVKKTVSSHNIVIFSKSYCPYCRRVKAVFKELNQ 340
           +F+ T SL   + A    SS+D+   FVKKT+SSH I IFSKSYCPYC+R KAVFKELNQ
Sbjct: 13  LFVLTASLCLPSSAAADHSSSDAAADFVKKTISSHKIAIFSKSYCPYCKRAKAVFKELNQ 72

Query: 341 SPHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGV 520
            P+++ELD+R+DGW++QDALS +VGRRTVPQVF+NGKHIGGSDDTVEA++SG LA+LLG+
Sbjct: 73  VPYVVELDQREDGWNIQDALSGMVGRRTVPQVFINGKHIGGSDDTVEAYQSGDLAKLLGI 132

Query: 521 AKKD 532
           A++D
Sbjct: 133 AEED 136


>gb|ADA70346.1| glutaredoxin [Litchi chinensis]
          Length = 132

 Score =  174 bits (441), Expect = 2e-41
 Identities = 85/123 (69%), Positives = 102/123 (82%)
 Frame = +2

Query: 164 LALVFLFTTSLYTSARASSADSHTSFVKKTVSSHNIVIFSKSYCPYCRRVKAVFKELNQS 343
           +A+ FLF  S    A AS  +    FVKKT+SSH IVIFSKSYCPYC+R K+VFKELNQ 
Sbjct: 9   VAVAFLFWASF---AGASEKNPEVDFVKKTISSHQIVIFSKSYCPYCKRAKSVFKELNQV 65

Query: 344 PHIIELDERDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGVA 523
           PH+IEL+ERDDG  +QDA+SE+VGRRTVPQVF++GKHIGGSDDTVEA+E+GKL +LLG+A
Sbjct: 66  PHVIELNERDDGSAIQDAVSEIVGRRTVPQVFIDGKHIGGSDDTVEAYENGKLHKLLGIA 125

Query: 524 KKD 532
            KD
Sbjct: 126 VKD 128


>ref|XP_002325236.1| glutaredoxin C4 [Populus trichocarpa] gi|118483557|gb|ABK93676.1|
           unknown [Populus trichocarpa]
           gi|118488597|gb|ABK96111.1| unknown [Populus
           trichocarpa] gi|222866670|gb|EEF03801.1| glutaredoxin C4
           [Populus trichocarpa]
          Length = 136

 Score =  174 bits (440), Expect = 3e-41
 Identities = 82/119 (68%), Positives = 102/119 (85%), Gaps = 2/119 (1%)
 Frame = +2

Query: 188 TSLYTSARASSADSHTSFVKKTVSSHNIVIFSKSYCPYCRRVKAVFKELNQSPHIIELDE 367
           T L  S   ++     +FVKKT+SSH IVIFSKSYCPYC++ K VFKELNQ+PH++ELD+
Sbjct: 18  TVLAASLTWAAGSPEATFVKKTISSHQIVIFSKSYCPYCKKAKGVFKELNQTPHVVELDQ 77

Query: 368 RDDGWDLQDALSEVVGRRTVPQVFVNGKHIGGSDDTVEAFESGKLAELLGVA--KKDDL 538
           R+DG D+QDA+SE+VGRRTVPQVF++GKHIGGSDDTVEA+ESG+LA+LLGVA  +KDDL
Sbjct: 78  REDGHDIQDAMSEIVGRRTVPQVFIDGKHIGGSDDTVEAYESGELAKLLGVASEQKDDL 136


Top