BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004289
         (1728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   327   5e-87
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   327   5e-87
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   306   1e-80
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   299   2e-78
gb|ABK95931.1| unknown [Populus trichocarpa]                          291   4e-76

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
            [Vitis vinifera]
          Length = 420

 Score =  327 bits (839), Expect = 5e-87
 Identities = 173/273 (63%), Positives = 189/273 (69%)
 Frame = +2

Query: 716  RDYTNPYLPVNPSAIDGTMQATLGPDGNRKEPESNVLLASIENMQYAVTVDVLHTVFSAF 895
            RDYTNPYLPVNP+AI+G  Q  LGPDG +KEPESNVLLASIENMQYAVTVDVLHTVFSAF
Sbjct: 180  RDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAF 239

Query: 896  GTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXX 1075
            GTVQKIA+FEKNGGMQAL+QYPDVT AAVAKEALEGH                       
Sbjct: 240  GTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGH----------------------- 276

Query: 1076 XXXXGHCIYDGGYCKLHLSYSRHTDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
                  CIYDGGYCKLHLSYSRHTDL+VKAH+DRSRDYT+PD G   +QQAP  P     
Sbjct: 277  ------CIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTV 330

Query: 1256 WQNPQTAPAYPGTGVAPHAHPPHGSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPMYSS 1435
            WQNPQ AP Y G   A  A     SWDP+MQA R TF S  S FP Q F S +++  Y  
Sbjct: 331  WQNPQAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFAS-SSISAYP- 388

Query: 1436 GAVPGSSPLHQHQYPSPRPGGAPLSGQPPYYGQ 1534
             A PGSSPL     P+ RPGGA   G+PPY+GQ
Sbjct: 389  -APPGSSPLTPAVPPNVRPGGASPPGRPPYFGQ 420


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
            [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
            protein product [Vitis vinifera]
          Length = 449

 Score =  327 bits (839), Expect = 5e-87
 Identities = 173/273 (63%), Positives = 189/273 (69%)
 Frame = +2

Query: 716  RDYTNPYLPVNPSAIDGTMQATLGPDGNRKEPESNVLLASIENMQYAVTVDVLHTVFSAF 895
            RDYTNPYLPVNP+AI+G  Q  LGPDG +KEPESNVLLASIENMQYAVTVDVLHTVFSAF
Sbjct: 209  RDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAF 268

Query: 896  GTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXX 1075
            GTVQKIA+FEKNGGMQAL+QYPDVT AAVAKEALEGH                       
Sbjct: 269  GTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGH----------------------- 305

Query: 1076 XXXXGHCIYDGGYCKLHLSYSRHTDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
                  CIYDGGYCKLHLSYSRHTDL+VKAH+DRSRDYT+PD G   +QQAP  P     
Sbjct: 306  ------CIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTV 359

Query: 1256 WQNPQTAPAYPGTGVAPHAHPPHGSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPMYSS 1435
            WQNPQ AP Y G   A  A     SWDP+MQA R TF S  S FP Q F S +++  Y  
Sbjct: 360  WQNPQAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFAS-SSISAYP- 417

Query: 1436 GAVPGSSPLHQHQYPSPRPGGAPLSGQPPYYGQ 1534
             A PGSSPL     P+ RPGGA   G+PPY+GQ
Sbjct: 418  -APPGSSPLTPAVPPNVRPGGASPPGRPPYFGQ 449



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 62/165 (37%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
 Frame = +2

Query: 797  NRKEP---ESNVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPD 964
            N K P     NVLL +IE ++   V++DV+H VFSAFG V KIA FEK  G QAL+Q+ D
Sbjct: 100  NNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTD 159

Query: 965  VTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXXXXXXGHCIYDGGYCKLHLSYSRH 1144
               A+ A+ AL+G  I                                G C L +SYS H
Sbjct: 160  AETASSARNALDGRSIPRYLLPEHV-----------------------GSCHLRISYSAH 196

Query: 1145 TDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGGWQNPQTAP 1279
            TDL++K  + RSRDYT P          P  PT + G   P   P
Sbjct: 197  TDLNIKFQSHRSRDYTNP--------YLPVNPTAIEGIAQPALGP 233


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
            gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
            protein, putative [Ricinus communis]
          Length = 483

 Score =  306 bits (784), Expect = 1e-80
 Identities = 169/298 (56%), Positives = 193/298 (64%), Gaps = 25/298 (8%)
 Frame = +2

Query: 716  RDYTNPYLPVNPSAIDGTMQATLGPDGNRKEPESNVLLASIENMQYAVTVDVLHTVFSAF 895
            RDYTNPYLPVNP+AI+G +Q  +GPDG +KEPESNVLLASIENMQYAVTVDV+HTVFSAF
Sbjct: 217  RDYTNPYLPVNPTAIEGPVQPAVGPDGKKKEPESNVLLASIENMQYAVTVDVIHTVFSAF 276

Query: 896  GTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXX 1075
            GTVQKIA+FEKNGG QALVQYPDV  AAVAKE LEGH                       
Sbjct: 277  GTVQKIAIFEKNGGTQALVQYPDVATAAVAKETLEGH----------------------- 313

Query: 1076 XXXXGHCIYDGGYCKLHLSYSRHTDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
                  CIYDGGYCKLHLSYSRHTDL+VKA++D+SRDYT+PD       Q P VPT    
Sbjct: 314  ------CIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQVPGVPTAPTM 367

Query: 1256 WQNPQTAPAYP----GTGVAPHAHPPHG---SWDPSMQASRPTFVSV-PSTFPGQTFNSP 1411
            WQNPQ +P YP     +  A  A  P G   +W+PSM+A  P + SV P TFPGQ++ +P
Sbjct: 368  WQNPQASPMYPVNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPSVPPGTFPGQSYPAP 427

Query: 1412 TNVPMYSSGAVP-GSSPLHQHQYPSP----------------RPGGAPLSGQPPYYGQ 1534
               P Y S A+P GSSPL Q    SP                RPGGA   GQPP+YG+
Sbjct: 428  P--PTYVSAAMPVGSSPLTQGSPMSPGVGTMPMTHPGVQSNLRPGGASPPGQPPFYGR 483



 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
 Frame = +2

Query: 797  NRKEP---ESNVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPD 964
            N K P     NVLL +IE ++   V++DV+H VFSAFG V KIA FEK  G QAL+Q+ D
Sbjct: 100  NNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTD 159

Query: 965  VTIAAVAKEALEGHCI 1012
               A+ A+ AL+G  I
Sbjct: 160  AETASSARNALDGRSI 175


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  299 bits (765), Expect = 2e-78
 Identities = 169/300 (56%), Positives = 189/300 (63%), Gaps = 27/300 (9%)
 Frame = +2

Query: 716  RDYTNPYLPVNPSAIDGTMQATLGPDGNRKEPESNVLLASIENMQYAVTVDVLHTVFSAF 895
            RDYTNPYLPVNP+AIDG +Q+T+G DG +KEPESNVLLASIENMQYAVTVDVLHTVFS F
Sbjct: 213  RDYTNPYLPVNPTAIDGPVQSTVGADGKKKEPESNVLLASIENMQYAVTVDVLHTVFSGF 272

Query: 896  GTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXX 1075
            GTVQKIA+FEKNGG QAL+QYPDV  AAVAKE LEGH                       
Sbjct: 273  GTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLEGH----------------------- 309

Query: 1076 XXXXGHCIYDGGYCKLHLSYSRHTDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
                  CIYDGGYCKLHLSYSRHTDL+VKA +D+SRDYT+PD   F   QAP + T    
Sbjct: 310  ------CIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPD-ASFLTAQAPGLHTAPTT 362

Query: 1256 WQNPQTAPAYPG-----TGVAPHAHPPH--GSWDPSMQASRPTFVSVPSTFPGQTFNSPT 1414
            WQNPQ    Y G     T  AP   PP    +WDPSMQA  P + SV   +PGQT+ +P 
Sbjct: 363  WQNPQAGSMYLGSNYATTAAAPAQVPPGQVAAWDPSMQAGGPGYSSVRGMYPGQTYPTP- 421

Query: 1415 NVPMYSSGAV-PGSSPLHQHQYPSP-------------------RPGGAPLSGQPPYYGQ 1534
              P Y+S A+ PGSSP   H Y SP                   RPGGA   GQ PYYG+
Sbjct: 422  --PAYASSALPPGSSP---HSYSSPISPGVASMGMTHPGVQPNMRPGGASPPGQTPYYGR 476



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 60/157 (38%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
 Frame = +2

Query: 797  NRKEP---ESNVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPD 964
            N K P     NVLL +IE ++   V++DV+H VFSAFG V KIA FEK  G QAL+Q+ D
Sbjct: 100  NNKSPGDNPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTD 159

Query: 965  VTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXXXXXXGHCIYDGGYCKLHLSYSRH 1144
               A+ A+ AL+G  I                                G C L +SYS H
Sbjct: 160  AETASSARNALDGRNIMFKKFRYLLPEHV-------------------GSCNLRISYSAH 200

Query: 1145 TDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
            TDL++K  + RSRDYT P          P  PT + G
Sbjct: 201  TDLNIKFQSHRSRDYTNP--------YLPVNPTAIDG 229


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  291 bits (745), Expect = 4e-76
 Identities = 159/296 (53%), Positives = 183/296 (61%), Gaps = 24/296 (8%)
 Frame = +2

Query: 716  RDYTNPYLPVNPSAIDGTMQATLGPDGNRKEPESNVLLASIENMQYAVTVDVLHTVFSAF 895
            RDYTNPYLPVNP+AI+G +Q T+G DG +KEPESNVLLASIENMQYAVT+DVLHTVFSAF
Sbjct: 209  RDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPESNVLLASIENMQYAVTIDVLHTVFSAF 268

Query: 896  GTVQKIAMFEKNGGMQALVQYPDVTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXX 1075
            GTVQKIA+FEKNGG QAL+QYPDV  AAVAKE LEGH                       
Sbjct: 269  GTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLEGH----------------------- 305

Query: 1076 XXXXGHCIYDGGYCKLHLSYSRHTDLSVKAHNDRSRDYTVPDPGPFPMQQAPAVPTVMGG 1255
                  CIYDGGYCKLHLSYSRHTDL+VKA++D+SRDYT+PD       QAP + T    
Sbjct: 306  ------CIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPD-ASLIAAQAPGLHTAPTM 358

Query: 1256 WQNPQTAPAYPG-----TGVAPHAHPPH--GSWDPSMQASRPTFVSVPSTFPGQTFNSPT 1414
            WQNPQ    Y G     T   P   PP    +WDP+MQA    + SVP T+PGQT+ +P 
Sbjct: 359  WQNPQAGSMYTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPP 418

Query: 1415 NVPMYSSGAVPGSSPLHQHQYP-----------------SPRPGGAPLSGQPPYYG 1531
                Y++ A+P  S    H  P                 + RP GA   GQPPYYG
Sbjct: 419  -ASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQPPYYG 473



 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 60/155 (38%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
 Frame = +2

Query: 797  NRKEP---ESNVLLASIENMQYA-VTVDVLHTVFSAFGTVQKIAMFEKNGGMQALVQYPD 964
            N K P     NVLL +IE ++   V++DV+H VFSAFG + KIA FEK  G QAL+Q+ D
Sbjct: 100  NNKSPGDNPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTD 159

Query: 965  VTIAAVAKEALEGHCIYXXXXXXXXXXXXXXXXXXXXXXXXGHCIYDGGYCKLHLSYSRH 1144
               A+ A+ AL+G  I                                G C L +SYS H
Sbjct: 160  SETASSARNALDGRSIPRYLLPEHV-----------------------GSCHLRISYSAH 196

Query: 1145 TDLSVKAHNDRSRDYTVPDPGPFPMQ-QAPAVPTV 1246
            TDL++K  + RSRDYT P     P   + P  PTV
Sbjct: 197  TDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTV 231