BLASTX nr result

ID: Coptis21_contig00004287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004287
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335271.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
gb|AFT92000.1| stress responsive A/B barrel domain family protei...   139   1e-30
gb|AFT91999.1| stress responsive A/B barrel domain family protei...   139   1e-30
ref|XP_002313655.1| predicted protein [Populus trichocarpa] gi|1...   137   3e-30
ref|XP_002268144.1| PREDICTED: uncharacterized protein At5g22580...   135   8e-30

>ref|XP_002335271.1| predicted protein [Populus trichocarpa]
           gi|224131636|ref|XP_002328071.1| predicted protein
           [Populus trichocarpa] gi|222833185|gb|EEE71662.1|
           predicted protein [Populus trichocarpa]
           gi|222837586|gb|EEE75951.1| predicted protein [Populus
           trichocarpa]
          Length = 110

 Score =  140 bits (353), Expect = 3e-31
 Identities = 69/97 (71%), Positives = 80/97 (82%)
 Frame = +2

Query: 374 AMGDWKHVVLVKFKEGVVAEEILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHIFS 553
           AMG+ KH+V+VKFKEGV  EEI+KGMEKLVSEVD V+SFEWGQDT    MLTQGFTH FS
Sbjct: 5   AMGEIKHLVVVKFKEGVAIEEIIKGMEKLVSEVDLVKSFEWGQDTEGPEMLTQGFTHSFS 64

Query: 554 MTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 664
           MTF   E++AAFQSHP+HV +S +FSAAIEKI +  F
Sbjct: 65  MTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIAVLCF 101


>gb|AFT92000.1| stress responsive A/B barrel domain family protein [Populus alba x
           Populus tremula var. glandulosa]
           gi|407260787|gb|AFT92012.1| stress responsive A/B barrel
           domain family protein [Populus alba x Populus tremula
           var. glandulosa]
          Length = 110

 Score =  139 bits (349), Expect = 1e-30
 Identities = 68/99 (68%), Positives = 82/99 (82%)
 Frame = +2

Query: 368 ALAMGDWKHVVLVKFKEGVVAEEILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 547
           A AMG+ KH+V+VKFKEG V E+I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGAVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 548 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 664
           FSMTF   E++AAFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>gb|AFT91999.1| stress responsive A/B barrel domain family protein [Populus
           tomentosa] gi|407260785|gb|AFT92011.1| stress responsive
           A/B barrel domain family protein [Populus tomentosa]
          Length = 110

 Score =  139 bits (349), Expect = 1e-30
 Identities = 68/99 (68%), Positives = 82/99 (82%)
 Frame = +2

Query: 368 ALAMGDWKHVVLVKFKEGVVAEEILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 547
           A AMG+ KH+V+VKFKEG V E+I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGAVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 548 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 664
           FSMTF   E++AAFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDYAAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>ref|XP_002313655.1| predicted protein [Populus trichocarpa] gi|118484440|gb|ABK94096.1|
           unknown [Populus trichocarpa]
           gi|222850063|gb|EEE87610.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  137 bits (345), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%)
 Frame = +2

Query: 368 ALAMGDWKHVVLVKFKEGVVAEEILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHI 547
           A AMG+ KH+V+VKFKEGVV E+I+KGMEKLVSEVD V+SFEWGQD+    MLTQGFTH 
Sbjct: 3   AEAMGEIKHLVVVKFKEGVVVEDIVKGMEKLVSEVDLVKSFEWGQDSEGPEMLTQGFTHS 62

Query: 548 FSMTFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 664
           FSMTF   E+  AFQSHP+HV +S +FSAAIEKI++  F
Sbjct: 63  FSMTFDKKEDHVAFQSHPNHVEYSATFSAAIEKIVVLCF 101


>ref|XP_002268144.1| PREDICTED: uncharacterized protein At5g22580 [Vitis vinifera]
           gi|147803505|emb|CAN68720.1| hypothetical protein
           VITISV_033679 [Vitis vinifera]
          Length = 105

 Score =  135 bits (341), Expect = 8e-30
 Identities = 64/96 (66%), Positives = 79/96 (82%)
 Frame = +2

Query: 377 MGDWKHVVLVKFKEGVVAEEILKGMEKLVSEVDSVRSFEWGQDTCNAVMLTQGFTHIFSM 556
           MGD+KH+V+ KFKEGV  EEI+KGMEKLV+++D+V+SFEWGQD  +  ML QGFTH F M
Sbjct: 1   MGDFKHLVVAKFKEGVAVEEIVKGMEKLVADIDAVKSFEWGQDLESQEMLRQGFTHAFLM 60

Query: 557 TFCSSEEFAAFQSHPSHVAFSTSFSAAIEKILLFDF 664
           TF +  +F AF SHP+HV FST+FSAAIEKI+L DF
Sbjct: 61  TFNNQGDFTAFLSHPNHVEFSTTFSAAIEKIVLLDF 96


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