BLASTX nr result

ID: Coptis21_contig00004263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004263
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]              357   4e-96
ref|NP_001235989.1| syntaxin [Glycine max] gi|22597174|gb|AAN034...   352   2e-94
gb|ACU18736.1| unknown [Glycine max]                                  349   9e-94
gb|AFK40681.1| unknown [Lotus japonicus]                              347   4e-93
ref|XP_003547794.1| PREDICTED: syntaxin-22-like [Glycine max]         347   4e-93

>gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]
          Length = 273

 Score =  357 bits (916), Expect = 4e-96
 Identities = 190/254 (74%), Positives = 210/254 (82%), Gaps = 2/254 (0%)
 Frame = -2

Query: 1126 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 947
            MSFQDLEAGR +G RRGY NG QDPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELR
Sbjct: 1    MSFQDLEAGRPLGPRRGYMNGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELR 60

Query: 946  DKLQKTRLHIGRLVKDTTAKLKQASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQR 767
            +KL KTR+HIG+LVKDT+AKLKQASETD   EVSASKKI DAKLAKDFQAVLKEFQKAQR
Sbjct: 61   EKLHKTRVHIGQLVKDTSAKLKQASETDHRVEVSASKKITDAKLAKDFQAVLKEFQKAQR 120

Query: 766  LAAERETAYS--VSQVLPPSSYDTSDLDVSTDRHPEQRAALVESRRQEVLLLDNEIVFNE 593
            LAAERETAY+  V Q + PSSY  S++DVS+++ PEQRA LVESRRQEVLLLDNEI FNE
Sbjct: 121  LAAERETAYTPFVPQAVLPSSYTASEIDVSSEKSPEQRALLVESRRQEVLLLDNEIAFNE 180

Query: 592  AXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNIESSHAATAQGTSHLV 413
            A                     IFKDLAVLVHEQGAMID+I SN+E++HAATAQG S L 
Sbjct: 181  AIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDEIGSNVENAHAATAQGRSQLA 240

Query: 412  KASKTQKSNSSLSC 371
            KA+KTQ+SNSSL+C
Sbjct: 241  KAAKTQRSNSSLTC 254


>ref|NP_001235989.1| syntaxin [Glycine max] gi|22597174|gb|AAN03474.1| syntaxin [Glycine
            max]
          Length = 273

 Score =  352 bits (902), Expect = 2e-94
 Identities = 188/254 (74%), Positives = 207/254 (81%), Gaps = 2/254 (0%)
 Frame = -2

Query: 1126 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 947
            MSFQD+EAGR  GSRRG  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDTP+LR
Sbjct: 1    MSFQDIEAGRPFGSRRGLMNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLR 60

Query: 946  DKLQKTRLHIGRLVKDTTAKLKQASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQR 767
            +KL KTRLHIG+LVKDT+AKLKQAS+ D + EV+ASKKIADAKLAKDFQAVLKEFQKAQR
Sbjct: 61   EKLHKTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQR 120

Query: 766  LAAERETAYS--VSQVLPPSSYDTSDLDVSTDRHPEQRAALVESRRQEVLLLDNEIVFNE 593
            LAAERETAY+  V Q + PSSY  S++DV +D+ PEQRA LVESRRQEVL LDNEI FNE
Sbjct: 121  LAAERETAYTPFVPQAVLPSSYTASEVDVGSDKSPEQRALLVESRRQEVLFLDNEIAFNE 180

Query: 592  AXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNIESSHAATAQGTSHLV 413
            A                     IFKDLAVLVHEQGAMIDDI SNIE+SHAATAQ  S L 
Sbjct: 181  AIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHAATAQAKSQLA 240

Query: 412  KASKTQKSNSSLSC 371
            KASKTQ+SNSSL+C
Sbjct: 241  KASKTQRSNSSLTC 254


>gb|ACU18736.1| unknown [Glycine max]
          Length = 273

 Score =  349 bits (896), Expect = 9e-94
 Identities = 187/254 (73%), Positives = 206/254 (81%), Gaps = 2/254 (0%)
 Frame = -2

Query: 1126 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 947
            MSFQD+EAGR   SRRG  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDTP+LR
Sbjct: 1    MSFQDIEAGRPFSSRRGLMNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLR 60

Query: 946  DKLQKTRLHIGRLVKDTTAKLKQASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQR 767
            +KL KTRLHIG+LVKDT+AKLKQAS+ D + EV+ASKKIADAKLAKDFQAVLKEFQKAQR
Sbjct: 61   EKLHKTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQR 120

Query: 766  LAAERETAYS--VSQVLPPSSYDTSDLDVSTDRHPEQRAALVESRRQEVLLLDNEIVFNE 593
            LAAERETAY+  V Q + PSSY  S++DV +D+ PEQRA LVESRRQEVL LDNEI FNE
Sbjct: 121  LAAERETAYTPFVPQAVLPSSYTASEVDVGSDKSPEQRALLVESRRQEVLFLDNEIAFNE 180

Query: 592  AXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNIESSHAATAQGTSHLV 413
            A                     IFKDLAVLVHEQGAMIDDI SNIE+SHAATAQ  S L 
Sbjct: 181  AIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHAATAQAKSQLA 240

Query: 412  KASKTQKSNSSLSC 371
            KASKTQ+SNSSL+C
Sbjct: 241  KASKTQRSNSSLTC 254


>gb|AFK40681.1| unknown [Lotus japonicus]
          Length = 273

 Score =  347 bits (890), Expect = 4e-93
 Identities = 187/254 (73%), Positives = 205/254 (80%), Gaps = 2/254 (0%)
 Frame = -2

Query: 1126 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 947
            MSFQD+EAGR  GSR G  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDTPELR
Sbjct: 1    MSFQDIEAGRPFGSRCGPINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELR 60

Query: 946  DKLQKTRLHIGRLVKDTTAKLKQASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQR 767
             KL KTRLHIG+LVKDT+AKLKQAS+ D + EV+ASKKIADAKLAKDFQAVLKEFQKAQR
Sbjct: 61   GKLHKTRLHIGQLVKDTSAKLKQASDIDHHVEVNASKKIADAKLAKDFQAVLKEFQKAQR 120

Query: 766  LAAERETAYS--VSQVLPPSSYDTSDLDVSTDRHPEQRAALVESRRQEVLLLDNEIVFNE 593
            LAAERETAY+  V Q + PSSY  S++D+ +D+ PEQRA LVESRRQEVL LDNEI FNE
Sbjct: 121  LAAERETAYTPFVPQAVLPSSYTASEVDIGSDKTPEQRALLVESRRQEVLFLDNEIAFNE 180

Query: 592  AXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNIESSHAATAQGTSHLV 413
            A                     IFKDLAVLVHEQGAMIDDI SNIE+SHAATAQ  S L 
Sbjct: 181  AIIKEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHAATAQAKSQLA 240

Query: 412  KASKTQKSNSSLSC 371
            KASKTQ+SNSSL+C
Sbjct: 241  KASKTQRSNSSLAC 254


>ref|XP_003547794.1| PREDICTED: syntaxin-22-like [Glycine max]
          Length = 273

 Score =  347 bits (890), Expect = 4e-93
 Identities = 187/254 (73%), Positives = 206/254 (81%), Gaps = 2/254 (0%)
 Frame = -2

Query: 1126 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 947
            MSFQD+EAGR  GSRRG  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDT +LR
Sbjct: 1    MSFQDIEAGRPFGSRRGLMNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTLDLR 60

Query: 946  DKLQKTRLHIGRLVKDTTAKLKQASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQR 767
            +KL KTRLHIG+LVKDT+AKLKQAS+ D + EV+ASKKIADAKLAKDFQAVLKEFQKAQR
Sbjct: 61   EKLHKTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQR 120

Query: 766  LAAERETAYS--VSQVLPPSSYDTSDLDVSTDRHPEQRAALVESRRQEVLLLDNEIVFNE 593
            LAAERETAY+  V Q + PSSY  S++DV +D+ PEQRA LVESRRQEVL LDNEI FNE
Sbjct: 121  LAAERETAYTPFVPQAVLPSSYTASEVDVGSDKSPEQRALLVESRRQEVLFLDNEIAFNE 180

Query: 592  AXXXXXXXXXXXXXXXXXXXXXIFKDLAVLVHEQGAMIDDIDSNIESSHAATAQGTSHLV 413
            A                     IFKDLAVLVHEQGAMIDDI SNIE+SHAATAQ  S L 
Sbjct: 181  AIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIENSHAATAQAKSQLS 240

Query: 412  KASKTQKSNSSLSC 371
            KASKTQ+SNSSL+C
Sbjct: 241  KASKTQRSNSSLTC 254


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