BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004251
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   191   4e-68
ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-58
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   176   6e-58
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   176   1e-57
ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   174   1e-57

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  191 bits (484), Expect(2) = 4e-68
 Identities = 115/244 (47%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
 Frame = +2

Query: 89  VLPYATAQPSHSSLQPPTQSFKPSMTXXXXXXXXXXXXXXFFSFYIRRCARDIHMDGMGS 268
           +LP+A AQ   S+     Q F  SM               FFS YIR C+   +    GS
Sbjct: 40  LLPFAGAQSDTSNDPYQQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNG---GS 96

Query: 269 VRLXXXXXXP----APRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETL 436
           +R              RGLD  ++ETFPTF YSVVKGLKIGK VLECAVCLNEFE++ETL
Sbjct: 97  IRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETL 156

Query: 437 RLLPQCNHVFHPECIDAWLTSHTTCPVCRANL-------EVHSPSEATQVPGLLAEENQA 595
           RL+P+C+HVFHPECIDAWL SH TCPVCRANL       +  +  EA +  G    + + 
Sbjct: 157 RLIPKCDHVFHPECIDAWLASHVTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGED 216

Query: 596 TPEVSESQTQVLIQVVDGEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGRLPRS 775
                 +  +V I+V D E +    PDVINP   N    QNRP RSKSTR     + PRS
Sbjct: 217 RRSEINAVREVSIRVADDETDVQQAPDVINP---NQSLHQNRPPRSKSTR---PRKFPRS 270

Query: 776 HSTG 787
           HSTG
Sbjct: 271 HSTG 274



 Score = 95.5 bits (236), Expect(2) = 4e-68
 Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +1

Query: 874  HSTGHSLVQPGGNYERFTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSV-SGWSATXXXX 1050
            HSTGHSL+QPG N ERFTLKLP+DVRKQI+   L RTTS +  PR GS   G+       
Sbjct: 271  HSTGHSLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAGEGS 330

Query: 1051 XXXXXXXXXHQLGLFDRAGKSDRWGFSIAPPFFWRNNS 1164
                      +L   +R+GKSDRW FSI PPFF R +S
Sbjct: 331  SRGKNFRRFDRL---ERSGKSDRWTFSITPPFFSRASS 365


>ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|222857937|gb|EEE95484.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  169 bits (428), Expect(2) = 5e-58
 Identities = 105/226 (46%), Positives = 123/226 (54%), Gaps = 15/226 (6%)
 Frame = +2

Query: 155 PSMTXXXXXXXXXXXXXXFFSFYIRRCARDIHMDGMGSVR----LXXXXXXPAPRGLDPT 322
           PSM               FFS YIR C         GS+R    +       A RGLDP 
Sbjct: 36  PSMAIIIVVLVAALFSMGFFSIYIRHCNE---ASANGSIRALGVVGLSRRAAASRGLDPG 92

Query: 323 LIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPECIDAWLTSH 502
           +IETFPT +YSVVKGLKIGK  LECAVCLNEFE+DETLRL+P C+HVFHP+CIDAWL SH
Sbjct: 93  VIETFPTLIYSVVKGLKIGKGALECAVCLNEFEDDETLRLIPNCDHVFHPDCIDAWLESH 152

Query: 503 TTCPVCRANL-----------EVHSPSEATQVPGLLAEENQATPEVSESQTQVLIQVVDG 649
           TTCPVCRA+L           E+HSP        L A+      E       V +QVV  
Sbjct: 153 TTCPVCRADLTKPADTVSQLSELHSPE-----LDLEAQNGALGIEPENGNANVEVQVVGP 207

Query: 650 EQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGRLPRSHSTG 787
           E      PD ++  V  +    NR  R++ +R G   R PRSHSTG
Sbjct: 208 E------PDDVSVNVNKTL---NRN-RTRGSRSGRPPRFPRSHSTG 243



 Score = 83.6 bits (205), Expect(2) = 5e-58
 Identities = 46/97 (47%), Positives = 55/97 (56%)
 Frame = +1

Query: 874  HSTGHSLVQPGGNYERFTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXX 1053
            HSTGHSLVQPG N +RFTL+LP +VRKQ++N KL R+TS V  PRQGS      T     
Sbjct: 240  HSTGHSLVQPGENTDRFTLRLPVEVRKQVMNRKLNRSTSMVVLPRQGSSRKGYRTGVGEG 299

Query: 1054 XXXXXXXXHQLGLFDRAGKSDRWGFSIAPPFFWRNNS 1164
                     +L   D   +SDRW F   P F  R +S
Sbjct: 300  SSRKVLNYKRLEKLDLEPRSDRWVFGRNPSFLARASS 336


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score =  176 bits (445), Expect(2) = 6e-58
 Identities = 115/258 (44%), Positives = 143/258 (55%), Gaps = 27/258 (10%)
 Frame = +2

Query: 95  PYATAQPSHSS---LQP--PTQSFKPSMTXXXXXXXXXXXXXXFFSFYIRRCARDIHMDG 259
           P+ +AQ   ++   L+P  P  SF PS+               FFS YIR+CA   +  G
Sbjct: 28  PFTSAQQESTTPPTLEPLAPAPSFNPSLAILMVIIVSAFFVMGFFSVYIRQCADRRYRRG 87

Query: 260 MG------SVRLXXXXXXPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFE 421
                    +           +GLDP +I TFPTFLYS VKG KIGKE LECAVCLNEFE
Sbjct: 88  SNFNPSASPIGGGGRWSRRRQQGLDPEVINTFPTFLYSTVKGHKIGKESLECAVCLNEFE 147

Query: 422 EDETLRLLPQCNHVFHPECIDAWLTSHTTCPVCRANLEVHSPSEA------------TQV 565
           +D+TLRL P+C+HVFHP+CIDAWL S+TTCPVCRANL V  P +             T  
Sbjct: 148 DDQTLRLTPKCSHVFHPDCIDAWLASNTTCPVCRANL-VPKPGDLAFDSVSFFEPNNTNN 206

Query: 566 PGLLAEENQATPEVSESQTQVLIQVVDGEQNSDSKPDVIN---PTVLN-SFPIQNRPVRS 733
             +  ++ Q  P   E+Q  VLI+V D   +  S+P+V N   P V++ S   QNRP RS
Sbjct: 207 TSVEPDQLQERPN-DETQNGVLIRVSD--DHDRSRPEVQNQQSPDVISLSTASQNRPPRS 263

Query: 734 KSTRKGIAGRLPRSHSTG 787
            ST    A   PRSHSTG
Sbjct: 264 WSTGWRFARLFPRSHSTG 281



 Score = 76.6 bits (187), Expect(2) = 6e-58
 Identities = 41/97 (42%), Positives = 52/97 (53%)
 Frame = +1

Query: 874  HSTGHSLVQPGGNYERFTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXX 1053
            HSTGHSLVQPG N +RFTL+LP+DVR Q+LN  L R  SCV FPR  S      +     
Sbjct: 278  HSTGHSLVQPGENLDRFTLRLPEDVRSQLLNTHLNRAKSCVAFPRASSSKKGYRSRSGGG 337

Query: 1054 XXXXXXXXHQLGLFDRAGKSDRWGFSIAPPFFWRNNS 1164
                    ++   FD   + +  G ++ PPF  R  S
Sbjct: 338  WRGRNFYFYE--RFDEEVRPEHSGLTLTPPFISRTGS 372


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  176 bits (445), Expect(2) = 1e-57
 Identities = 107/247 (43%), Positives = 131/247 (53%), Gaps = 14/247 (5%)
 Frame = +2

Query: 89  VLPYATAQPSHSSLQPPT------QSFKPSMTXXXXXXXXXXXXXXFFSFYIRRCAR--- 241
           +L  ATAQ +     PP+      Q F PSM               FFS Y+R+C     
Sbjct: 33  LLSCATAQTAAEQSPPPSELMSLAQKFNPSMAIVMIAIVSAFFFMGFFSVYLRQCIERRV 92

Query: 242 ----DIHMDGMGSVRLXXXXXXPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCL 409
               +  + G+G  R        A RGL+ + IE FPTF+YS VK  KIGKE LECAVCL
Sbjct: 93  RGRFNTEIVGIGGHRSWM-----AARGLNSSDIERFPTFVYSAVKAHKIGKEGLECAVCL 147

Query: 410 NEFEEDETLRLLPQCNHVFHPECIDAWLTSHTTCPVCRANLEVHSPSEATQVPGLLAEEN 589
           NEFE+DETLRLLP+CNHVFH +CID WL SH TCPVCRANL    P E    P  +    
Sbjct: 148 NEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPVCRANL-TPKPGEKFCAPVPI---- 202

Query: 590 QATPEVSESQTQVLIQVVDGEQNSDSKPDVINPTVLN-SFPIQNRPVRSKSTRKGIAGRL 766
              PE    ++   +++V+         D  +P V+N      NRP RS+S R  I G  
Sbjct: 203 -FGPETESDESDTRVEIVETPNQVPIAVDAQSPDVMNHGRDTPNRPPRSRSIRARITGMF 261

Query: 767 PRSHSTG 787
           PRSHSTG
Sbjct: 262 PRSHSTG 268



 Score = 75.9 bits (185), Expect(2) = 1e-57
 Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +1

Query: 874  HSTGHSLVQPGGNYERFTLKLPDDVRKQILNGKLTRTTSCVTFPR-QGSVSGWSATXXXX 1050
            HSTGHSL+QPG N ERFTL+LP+++R QI+N  L+RT S V  P  Q S  G+ A     
Sbjct: 265  HSTGHSLIQPGENRERFTLRLPEEIRNQIMNTSLSRTKSWVALPGVQSSKRGYRANSVGS 324

Query: 1051 XXXXXXXXXHQLGLFDRAGKSDRWGFSIAPPFFWRNNS 1164
                      Q   F+   +++R GFS+ PPF  R  S
Sbjct: 325  LRGKTYFNYEQ---FNGEVRAERLGFSMTPPFVPRTGS 359


>ref|XP_003536091.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 359

 Score =  174 bits (441), Expect(2) = 1e-57
 Identities = 107/236 (45%), Positives = 133/236 (56%), Gaps = 3/236 (1%)
 Frame = +2

Query: 89  VLPYATAQPSHSSLQPPTQSFKPSMTXXXXXXXXXXXXXXFFSFYIRRCARDIHMDGMGS 268
           + P+A AQP+ +  Q     F PSM               FFS YIR C+ D     + +
Sbjct: 16  LFPFAAAQPATNQNQSYYNKFSPSMAIIIVILIAALFLMGFFSIYIRHCS-DSPSASIRN 74

Query: 269 VRLXXXXXXPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLP 448
           +           RGL+  +I+TFPT  YS VK  K+GK  LECAVCLNEFE+ ETLRL+P
Sbjct: 75  LAAATGRSRRGTRGLEQAVIDTFPTLEYSAVKIHKLGKGTLECAVCLNEFEDTETLRLIP 134

Query: 449 QCNHVFHPECIDAWLTSHTTCPVCRANLEVHSPSEATQ-VPGLLAEENQATPEVSESQTQ 625
           +C+HVFHPECID WL SHTTCPVCRANL V  P E+   +P L A      PE  E+Q +
Sbjct: 135 KCDHVFHPECIDEWLASHTTCPVCRANL-VPQPGESVHGIPILNA------PEDIEAQHE 187

Query: 626 VLIQVVDGE-QNSDSKPDV-INPTVLNSFPIQNRPVRSKSTRKGIAGRLPRSHSTG 787
               +V+ E Q  D KP V   P VL+     NR  R++ +R G   R PRSHSTG
Sbjct: 188 AQNDLVEPEQQQQDPKPPVPTEPQVLSLNQTLNRN-RTRGSRSGRPRRFPRSHSTG 242



 Score = 77.0 bits (188), Expect(2) = 1e-57
 Identities = 47/98 (47%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +1

Query: 874  HSTGHSLVQPGGNYERFTLKLPDDVRKQIL-NGKLTRTTSCVTFPRQGSVSGWSATXXXX 1050
            HSTGHSLV PG + ERFTL+LP++VRKQIL N +L R  S V  PR+GS      T    
Sbjct: 239  HSTGHSLVLPGEDTERFTLRLPEEVRKQILQNPQLHRARSLVILPREGSSRRGYRTGEGS 298

Query: 1051 XXXXXXXXXHQLGLFDRAGKSDRWGFSIAPPFFWRNNS 1164
                           DR  KSDRW F++APPF  R +S
Sbjct: 299  SRGRSSRR------LDRGFKSDRWVFTMAPPFLVRASS 330