BLASTX nr result

ID: Coptis21_contig00004250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004250
         (2702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266061.1| PREDICTED: uncharacterized membrane protein ...   415   e-113
ref|XP_002533021.1| Transcription factor RF2a, putative [Ricinus...   391   e-106
ref|XP_002331470.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
ref|XP_003525005.1| PREDICTED: uncharacterized membrane protein ...   390   e-105
ref|XP_003531297.1| PREDICTED: uncharacterized membrane protein ...   376   e-101

>ref|XP_002266061.1| PREDICTED: uncharacterized membrane protein At4g06598 [Vitis
            vinifera] gi|147788552|emb|CAN61016.1| hypothetical
            protein VITISV_021778 [Vitis vinifera]
            gi|297739555|emb|CBI29737.3| unnamed protein product
            [Vitis vinifera]
          Length = 374

 Score =  415 bits (1067), Expect = e-113
 Identities = 223/380 (58%), Positives = 275/380 (72%), Gaps = 11/380 (2%)
 Frame = -2

Query: 1561 MANQKGSSNFRNMSYTGRQSLLPPRIPFPSISPAYADYGSSSALGAKGAQKPREGLR-HH 1385
            MAN KGSSNFRNM  +G+ SLLPP+ PFPSISP+YADY  S A+G+K   +PREG   HH
Sbjct: 1    MANSKGSSNFRNMISSGKHSLLPPKSPFPSISPSYADYAPSPAIGSKVIARPREGGNTHH 60

Query: 1384 QRTSSGSFLIEEQPSWVEELLDEPDTPVRRGHRRXXXXXXXXXXXXXXXNIYNSFQEECK 1205
            QRTSS  FLIEEQPSW+++LL+EP+TPVRRGHRR               NI ++ Q+E K
Sbjct: 61   QRTSSEGFLIEEQPSWLDDLLNEPETPVRRGHRRSSSDSFAYMDATNVSNIDHTAQDELK 120

Query: 1204 FNNVRQVPSRGSQDFDYYKDVRHAPFYQEPNSFGRQKNRSWDSSLSPLTYPGGVSSANDN 1025
            F N+    S GSQDF++YKD R+A FY EPNSFGRQKNR+       +TY  G+ S  D+
Sbjct: 121  FRNLISATSWGSQDFEHYKDARNASFYVEPNSFGRQKNRT------SMTYSSGLPSTRDS 174

Query: 1024 VGLQSSGPSGASREPDGVPPISNGKQELEESAPNDLKGSADRRECSQTKPATTETDPKRA 845
              LQSSG S    E DGV   +  KQ+L ES+ +D K S++RR+CS  KP+ +ETD KRA
Sbjct: 175  NVLQSSGSSCIPHETDGVSSTATEKQDLVESSLHDPKASSERRDCSHAKPSASETDTKRA 234

Query: 844  KQQFAQRSRVRKLQYIAELERNVEVLQAEGSEFSAEIEFLDQQNLIMNMQNKALKQRLDS 665
            KQQFAQRSRVRKLQYIAELERNV+ L+AEGSE SAE++FL+QQNLI++M+NKALKQRL+S
Sbjct: 235  KQQFAQRSRVRKLQYIAELERNVQALKAEGSEVSAELDFLNQQNLILSMENKALKQRLES 294

Query: 664  LSQEHAIKRLEQEMLEREIARLQALC----------XXXXXXPTHRRARSRDIDSQFANM 515
            L+QE  IK LEQE+LEREI RL++L                  +HRR+ SRD+D+QFAN+
Sbjct: 295  LAQEQLIKYLEQEVLEREIGRLRSLYHQQQQQQQQPQQQQPASSHRRSSSRDLDAQFANL 354

Query: 514  SLKHKEASSGHDPVSGPLHI 455
            SLKHK+ SSG D V+GPL I
Sbjct: 355  SLKHKDNSSGTDAVTGPLRI 374


>ref|XP_002533021.1| Transcription factor RF2a, putative [Ricinus communis]
            gi|223527183|gb|EEF29352.1| Transcription factor RF2a,
            putative [Ricinus communis]
          Length = 380

 Score =  391 bits (1005), Expect = e-106
 Identities = 208/379 (54%), Positives = 265/379 (69%), Gaps = 12/379 (3%)
 Frame = -2

Query: 1561 MANQKGSSNFRNMSYTGRQSLLPPRIPFPSISPAYADYGSSSALGAKGAQKPREGLRHHQ 1382
            MAN KGS N RN+ Y+G+ +LLPP+IPFPS+SP+Y DY  S+ +G+K  Q+PREG  HHQ
Sbjct: 1    MANSKGSPNVRNLMYSGKHALLPPKIPFPSVSPSYVDYVPSNVIGSKAVQRPREGNAHHQ 60

Query: 1381 RTSSGSFLIEEQPSWVEELLDEPDTPVRRG-HRRXXXXXXXXXXXXXXXNIYNSFQEECK 1205
            RTSS + LIEEQPSW+++LL+EP+TPVRRG HRR               NI  S Q++ +
Sbjct: 61   RTSSETLLIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDVANVSNIDYSTQDDYR 120

Query: 1204 FNNVRQV-PSRGSQDFDYYKDVRHAPFYQEPNSFGRQKNRSWDSSLSPLTYPGGVSSAND 1028
            + N+  V PS G QD+DY+KD R      + N   +QKNR+W+SSL+P     G+ S+ +
Sbjct: 121  YKNMMSVLPSWGPQDYDYHKDARQVSLCADVN-MSKQKNRTWESSLNPAARQSGLPSSRE 179

Query: 1027 NVGLQSSGPSGASREPDGVPPISNGKQELEESAPNDLKGSADRRECSQTKPATTETDPKR 848
            N   QSS  S A +E DG+    + KQ+  ES P+D K S+DR++    K + +ETD KR
Sbjct: 180  NAVSQSSVSSCALQEADGIQSSLSEKQDSAESGPHDSKASSDRKDGCHAKSSVSETDTKR 239

Query: 847  AKQQFAQRSRVRKLQYIAELERNVEVLQAEGSEFSAEIEFLDQQNLIMNMQNKALKQRLD 668
            AKQQFAQRSRVRKLQYIAELERNV+ LQAEGSE SAE+EFL+QQNLI+NM+NKALKQRL+
Sbjct: 240  AKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFLNQQNLILNMENKALKQRLE 299

Query: 667  SLSQEHAIKRLEQEMLEREIARLQALC----------XXXXXXPTHRRARSRDIDSQFAN 518
            SL+QE  IK LE E+LEREI RL+AL                  +HRR  SRD++SQF N
Sbjct: 300  SLAQEQLIKYLEHEVLEREIGRLRALYKQQQQPQQPQQQQQPSSSHRRTNSRDLESQFGN 359

Query: 517  MSLKHKEASSGHDPVSGPL 461
            +SLKHK+AS G DPV+GPL
Sbjct: 360  LSLKHKDASPGRDPVTGPL 378


>ref|XP_002331470.1| predicted protein [Populus trichocarpa] gi|222873548|gb|EEF10679.1|
            predicted protein [Populus trichocarpa]
          Length = 368

 Score =  391 bits (1005), Expect = e-106
 Identities = 207/373 (55%), Positives = 267/373 (71%), Gaps = 4/373 (1%)
 Frame = -2

Query: 1561 MANQKGSSNFRNMSYTGRQSLLPPRIPFPSISPAYADYGSSSALGAKGAQKPREGLRHHQ 1382
            MAN KGS+N RN  Y+G+ +LLPP+ PFP +SP+Y DY  SS++G+K  QKPREG  HHQ
Sbjct: 1    MANSKGSANIRNFMYSGKHALLPPKSPFPIVSPSYVDYVPSSSIGSKTVQKPREGNTHHQ 60

Query: 1381 RTSSGSFLIEEQPSWVEELLDEPDTPVRRG-HRRXXXXXXXXXXXXXXXNIYNSFQEECK 1205
            RTSS    IE+QPSW+++LL+EP+TPVRRG HRR               N+  + Q+ C+
Sbjct: 61   RTSSEMLFIEDQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDAANASNMDYAAQDGCR 120

Query: 1204 FNNVRQVPSRGSQDFDYYKDVRHAPFYQEPNSFGRQKNRSWDSSLSPLTYPGGVSSANDN 1025
            + NV  +PS GSQDFDYYKDVR  P Y E N   +QKNR+WDSSL+  TYP  +SS  +N
Sbjct: 121  YKNVISIPSWGSQDFDYYKDVRRTPLYAEMN-MSKQKNRAWDSSLNAQTYPSSLSSPREN 179

Query: 1024 VGLQSSGPSGASREPDGVPPISNGKQELEESAPNDLKGSADRRECSQTKPATTETDPKRA 845
             GLQSSG S A RE D V   S  +++      +D K S+++ + S +K + +ETD KRA
Sbjct: 180  AGLQSSGSSCAPREADSV---SESEKQDPLDGSHDSKISSEK-DSSNSKSSASETDTKRA 235

Query: 844  KQQFAQRSRVRKLQYIAELERNVEVLQAEGSEFSAEIEFLDQQNLIMNMQNKALKQRLDS 665
            KQQFAQRSRVRKLQYIA+LERNV+ LQA+GSE SAE+EF++QQNLI++M+NKALKQR ++
Sbjct: 236  KQQFAQRSRVRKLQYIADLERNVQALQAKGSEVSAELEFVNQQNLILSMENKALKQRFEN 295

Query: 664  LSQEHAIKRLEQEMLEREIARLQALC---XXXXXXPTHRRARSRDIDSQFANMSLKHKEA 494
            L+ E  IK LE E+LEREI RL+AL            HRR++S+D+DSQFAN+SLKHK+A
Sbjct: 296  LAHEQLIKCLEHEVLEREIGRLRALYQQQQQQQPASNHRRSKSKDLDSQFANLSLKHKDA 355

Query: 493  SSGHDPVSGPLHI 455
            +S  DPV+G L I
Sbjct: 356  NSSRDPVTGSLRI 368


>ref|XP_003525005.1| PREDICTED: uncharacterized membrane protein At4g06598-like [Glycine
            max]
          Length = 375

 Score =  390 bits (1002), Expect = e-105
 Identities = 208/372 (55%), Positives = 256/372 (68%), Gaps = 10/372 (2%)
 Frame = -2

Query: 1561 MANQKGSSNFRNMSYTGRQSLLPPRIPFPSISPAYADYGSSSALGAKGAQKPREGLRHHQ 1382
            MAN KGSS FRN  Y G+  LLPP+ PFPS+S AYADY  + A+G K   +PR+G  HHQ
Sbjct: 1    MANSKGSSGFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQ 60

Query: 1381 RTSSGSFLIEEQPSWVEELLDEPDTPVRRG-HRRXXXXXXXXXXXXXXXNIYNSFQEECK 1205
            RTSS S +IEEQPSW+++LL+EP+TPVRRG HRR               NI  + Q+E K
Sbjct: 61   RTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNINYANQDEYK 120

Query: 1204 FNNVRQVPSRGSQDFDYYKDVRHAPFYQEPNSFGRQKNRSWDSSLSPLTYPGGVSSANDN 1025
            + N+  +PS  SQDFD  KD RH P Y E NS  +QKNRSWDS  + +T P GV S  D+
Sbjct: 121  YKNMMSIPSWSSQDFDRSKDARHVPVYAEMNSV-KQKNRSWDSFSNAMTNPVGVPSGKDS 179

Query: 1024 VGLQSSGPSGASREPDGVPPISNGKQELEESAPNDLKGSADRRECSQTKPATTETDPKRA 845
               QSSG      E DG+PP S+ K +  ES   D K   ++++ S  K + +ETD KRA
Sbjct: 180  AAFQSSGLQCTPHEADGLPPASSEKHDSVESGLQDAKPFPEKKDSSHAKSSASETDTKRA 239

Query: 844  KQQFAQRSRVRKLQYIAELERNVEVLQAEGSEFSAEIEFLDQQNLIMNMQNKALKQRLDS 665
            KQQFAQRSRVRKLQYIAELERNV+VLQAEGSE SAE+EFL+QQNLI++M+NKALKQRL++
Sbjct: 240  KQQFAQRSRVRKLQYIAELERNVQVLQAEGSEVSAELEFLNQQNLILSMENKALKQRLEN 299

Query: 664  LSQEHAIKRLEQEMLEREIARLQALCXXXXXXPT---------HRRARSRDIDSQFANMS 512
            ++QE  IK LEQE+LEREI RL+AL        T         HRR  SRD++SQFAN+S
Sbjct: 300  IAQEQLIKYLEQEVLEREIGRLRALYQQQQQPQTQPQQQPSGSHRRTNSRDLESQFANLS 359

Query: 511  LKHKEASSGHDP 476
            LKHK+ +SG DP
Sbjct: 360  LKHKDTNSGQDP 371


>ref|XP_003531297.1| PREDICTED: uncharacterized membrane protein At4g06598 [Glycine max]
          Length = 376

 Score =  376 bits (966), Expect = e-101
 Identities = 199/373 (53%), Positives = 253/373 (67%), Gaps = 11/373 (2%)
 Frame = -2

Query: 1561 MANQKGSSNFRNMSYTGRQSLLPPRIPFPSISPAYADYGSSSALGAKGAQKPREGLRHHQ 1382
            MAN KGSS+FRN  Y G+  LLPP+ PFPS+S AYADY  + A+G K   +PR+G  HHQ
Sbjct: 1    MANSKGSSSFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQ 60

Query: 1381 RTSSGSFLIEEQPSWVEELLDEPDTPVRRG-HRRXXXXXXXXXXXXXXXNIYNSFQEECK 1205
            RTSS S +IEEQPSW+++LL+EP+TPVRRG HRR               N+  + Q+E K
Sbjct: 61   RTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNLNYASQDEYK 120

Query: 1204 FNNVRQVPSRGSQDFDYYKDVRHAPFYQEPNSFGRQKNRSWDSSLSPLTYPGGVSSANDN 1025
            + N+  +P    QDFD  KD RH P Y E NS  +QKNRSWDS  + +T P GV S  D+
Sbjct: 121  YKNMMSIPPWSPQDFDCSKDARHVPVYAEMNST-KQKNRSWDSFSNAMTNPVGVPSGKDS 179

Query: 1024 VGLQSSGPSGASREPDGVPPISNGKQELEESAPNDLKGSADRRECSQTKPATTETDPKRA 845
               QSSG      E D +PP ++ K +  E    D K   ++++ S  K + +ETD KRA
Sbjct: 180  AAFQSSGLQCTPHEADALPPAASEKHDSVELGLQDAKSFPEKKDISHAKSSASETDTKRA 239

Query: 844  KQQFAQRSRVRKLQYIAELERNVEVLQAEGSEFSAEIEFLDQQNLIMNMQNKALKQRLDS 665
            KQQFAQRSRVRKLQYIAELERNV+ LQAEGSE SAE+EFL+QQNLI++M+NKALKQRL++
Sbjct: 240  KQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLEN 299

Query: 664  LSQEHAIKRLEQEMLEREIARLQALC----------XXXXXXPTHRRARSRDIDSQFANM 515
            ++QE  IK LEQE+LEREI RL+AL                  +HRR+ SR+++SQFAN+
Sbjct: 300  IAQEQLIKYLEQEVLEREIGRLRALYQQQQQPPQTQPQQQPSGSHRRSNSRELESQFANL 359

Query: 514  SLKHKEASSGHDP 476
            SLKHK+ +SG DP
Sbjct: 360  SLKHKDTNSGQDP 372


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