BLASTX nr result

ID: Coptis21_contig00004233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00004233
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280234.1| PREDICTED: T-complex protein 1 subunit delta...   169   2e-40
emb|CAN65390.1| hypothetical protein VITISV_038363 [Vitis vinifera]   169   2e-40
emb|CAN70636.1| hypothetical protein VITISV_008621 [Vitis vinifera]   169   2e-40
ref|XP_004161843.1| PREDICTED: T-complex protein 1 subunit delta...   163   1e-38
ref|XP_004137492.1| PREDICTED: T-complex protein 1 subunit delta...   163   1e-38

>ref|XP_002280234.1| PREDICTED: T-complex protein 1 subunit delta [Vitis vinifera]
          Length = 533

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = -1

Query: 287 RSSKTESYTDNKRKDDIRQSNILSAATVSDSVRTSLGPKGMDKMISTASGEVIITNDGAT 108
           RSSKTESY DNKRKDDIRQ+NI++A  V+D+VRTSLGPKGMDKMISTASGEVIITNDGAT
Sbjct: 10  RSSKTESYVDNKRKDDIRQANIVAARAVADAVRTSLGPKGMDKMISTASGEVIITNDGAT 69

Query: 107 ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 3
           ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV
Sbjct: 70  ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 104


>emb|CAN65390.1| hypothetical protein VITISV_038363 [Vitis vinifera]
          Length = 533

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = -1

Query: 287 RSSKTESYTDNKRKDDIRQSNILSAATVSDSVRTSLGPKGMDKMISTASGEVIITNDGAT 108
           RSSKTESY DNKRKDDIRQ+NI++A  V+D+VRTSLGPKGMDKMISTASGEVIITNDGAT
Sbjct: 10  RSSKTESYVDNKRKDDIRQANIVAARAVADAVRTSLGPKGMDKMISTASGEVIITNDGAT 69

Query: 107 ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 3
           ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV
Sbjct: 70  ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 104


>emb|CAN70636.1| hypothetical protein VITISV_008621 [Vitis vinifera]
          Length = 533

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = -1

Query: 287 RSSKTESYTDNKRKDDIRQSNILSAATVSDSVRTSLGPKGMDKMISTASGEVIITNDGAT 108
           RSSKTESY DNKRKDDIRQ+NI++A  V+D+VRTSLGPKGMDKMISTASGEVIITNDGAT
Sbjct: 10  RSSKTESYVDNKRKDDIRQANIVAARAVADAVRTSLGPKGMDKMISTASGEVIITNDGAT 69

Query: 107 ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 3
           ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV
Sbjct: 70  ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 104


>ref|XP_004161843.1| PREDICTED: T-complex protein 1 subunit delta-like [Cucumis sativus]
          Length = 533

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = -1

Query: 287 RSSKTESYTDNKRKDDIRQSNILSAATVSDSVRTSLGPKGMDKMISTASGEVIITNDGAT 108
           RSSKTESY DNKRK+D+RQ+NI++A  ++D+VRTSLGPKGMDKMISTASGEVIITNDGAT
Sbjct: 10  RSSKTESYVDNKRKEDVRQANIIAARAIADAVRTSLGPKGMDKMISTASGEVIITNDGAT 69

Query: 107 ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 3
           ILNKMEVLQPAAKMLVELSKSQD  AGDGTTTVVV
Sbjct: 70  ILNKMEVLQPAAKMLVELSKSQDSAAGDGTTTVVV 104


>ref|XP_004137492.1| PREDICTED: T-complex protein 1 subunit delta-like [Cucumis sativus]
          Length = 533

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = -1

Query: 287 RSSKTESYTDNKRKDDIRQSNILSAATVSDSVRTSLGPKGMDKMISTASGEVIITNDGAT 108
           RSSKTESY DNKRK+D+RQ+NI++A  ++D+VRTSLGPKGMDKMISTASGEVIITNDGAT
Sbjct: 10  RSSKTESYVDNKRKEDVRQANIIAARAIADAVRTSLGPKGMDKMISTASGEVIITNDGAT 69

Query: 107 ILNKMEVLQPAAKMLVELSKSQDIVAGDGTTTVVV 3
           ILNKMEVLQPAAKMLVELSKSQD  AGDGTTTVVV
Sbjct: 70  ILNKMEVLQPAAKMLVELSKSQDSAAGDGTTTVVV 104


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